| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008376 |
Definition |
Geobacillus phage GBSV1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Svunavirus. |
DB of origin |
REFSEQ |
Length |
34683 |
Host Name |
Geobacillus sp. 6k51 |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
44.37 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_764482.1 | NC_008376_p28 | major tail protein | phrog_88 | major tail protein | tail | 1 | 16184 | 16768 |
| YP_764503.1 | NC_008376_p47 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 31341 | 31784 |
| YP_764474.1 | NC_008376_p20 | phage portal protein | phrog_12 | portal protein | head and packaging | 1 | 11675 | 12895 |
| YP_764458.1 | NC_008376_p2 | DNA-binding phage-related protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 1231 | 2100 |
| YP_764492.1 | NC_008376_p37 | hypothetical protein | phrog_30729 | unknown function | unknown function | -1 | 25158 | 25373 |
| YP_001504369.1 | NC_008376_p11 | hypothetical protein | phrog_29429 | unknown function | unknown function | 1 | 5584 | 5772 |
| YP_764478.1 | NC_008376_p24 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 14926 | 15207 |
| YP_764479.1 | NC_008376_p25 | hypothetical protein | phrog_1951 | head-tail adaptor | connector | 1 | 15204 | 15509 |
| YP_764504.1 | NC_008376_p48 | immunity repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 31805 | 32251 |
| YP_764465.1 | NC_008376_p9 | hypothetical protein | phrog_36164 | unknown function | unknown function | 1 | 5293 | 5520 |
| YP_764471.1 | NC_008376_p17 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9213 | 9494 |
| YP_764498.1 | NC_008376_p42 | DNA segregation protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 27528 | 28724 |
| YP_764510.1 | NC_008376_p53 | hypothetical protein | phrog_26597 | unknown function | unknown function | 1 | 33971 | 34246 |
| YP_764490.1 | NC_008376_p35 | phage-related lysis protein | phrog_199 | holin | lysis | 1 | 24035 | 24448 |
| YP_764493.1 | NC_008376_p38 | late competence protein | phrog_7043 | tail protein | tail | -1 | 25374 | 26219 |
| YP_764486.1 | NC_008376_p32 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 20205 | 20927 |
| YP_764466.1 | NC_008376_p10 | hypothetical protein | phrog_28900 | unknown function | unknown function | 1 | 5517 | 5651 |
| YP_764463.2 | NC_008376_p7 | hypothetical protein | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 4114 | 4605 |
| YP_764457.1 | NC_008376_p1 | YqaJ | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 269 | 1234 |
| YP_764481.1 | NC_008376_p27 | aminopeptidase | phrog_78 | tail terminator | connector | 1 | 15873 | 16187 |
| YP_764505.1 | NC_008376_p49 | repressor protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 32414 | 32650 |
| YP_764462.1 | NC_008376_p5 | hypothetical protein | phrog_31962 | unknown function | unknown function | 1 | 3686 | 3913 |
| YP_764507.1 | NC_008376_p51 | phage associated-antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 32838 | 33398 |
| YP_764491.1 | NC_008376_p36 | N-acetylmuramoyl-L-alanine amidase | phrog_435 | endolysin | lysis | 1 | 24445 | 25125 |
| YP_764461.2 | NC_008376_p4 | Similar to Bacillus virus 1 protein YP_001425588 | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 2887 | 3675 |
| YP_764483.1 | NC_008376_p29 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 16772 | 17119 |
| YP_764472.1 | NC_008376_p18 | hypothetical protein | phrog_361 | terminase small subunit | head and packaging | 1 | 9596 | 9952 |
| YP_764467.1 | NC_008376_p12 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 5863 | 6318 |
| YP_764475.1 | NC_008376_p21 | phage prohead | phrog_80 | head maturation protease | head and packaging | 1 | 12870 | 13478 |
| YP_001504368.1 | NC_008376_p6 | Similar to Bacillus virus 1 protein YP_001425590 | phrog_10675 | unknown function | unknown function | 1 | 3913 | 4095 |
| YP_764508.1 | NC_008376_p52 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33480 | 33968 |
| YP_764477.1 | NC_008376_p23 | hypothetical protein | phrog_3673 | Arc-like repressor | transcription regulation | 1 | 14738 | 14929 |
| YP_764484.1 | NC_008376_p30 | hypothetical protein | phrog_3033 | unknown function | unknown function | 1 | 17173 | 17322 |
| YP_764459.1 | NC_008376_p3 | phage replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 2142 | 3008 |
| YP_764489.1 | NC_008376_p34 | hypothetical protein | phrog_25763 | unknown function | unknown function | 1 | 22639 | 24024 |
| YP_764497.1 | NC_008376_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27092 | 27526 |
| YP_764499.2 | NC_008376_p43 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 28705 | 29385 |
| YP_764496.1 | NC_008376_p40 | HTH_3 | phrog_3 | transcriptional repressor | transcription regulation | -1 | 26591 | 26815 |
| YP_764506.1 | NC_008376_p50 | hypothetical protein | phrog_2977 | anti-repressor | transcription regulation | 1 | 32647 | 32802 |
| YP_764470.1 | NC_008376_p16 | hypothetical protein | phrog_38019 | unknown function | unknown function | 1 | 8539 | 9180 |
| YP_764500.1 | NC_008376_p44 | hypothetical protein | phrog_32993 | unknown function | unknown function | 1 | 29401 | 29580 |
| YP_764469.1 | NC_008376_p14 | GepA protein | phrog_10390 | unknown function | unknown function | 1 | 7229 | 7978 |
| YP_764468.1 | NC_008376_p13 | hypothetical protein | phrog_4012 | unknown function | unknown function | 1 | 6501 | 7226 |
| YP_764501.1 | NC_008376_p45 | DNA integration/recombination protein | phrog_1 | integrase | integration and excision | -1 | 29865 | 31049 |
| YP_764502.1 | NC_008376_p46 | hypothetical protein | phrog_15228 | unknown function | unknown function | -1 | 31052 | 31234 |
| YP_764476.1 | NC_008376_p22 | phage major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 13441 | 14718 |
| YP_764488.2 | NC_008376_p33 | hypothetical protein | phrog_22322 | tail protein | tail | 1 | 20937 | 22625 |
| YP_764473.1 | NC_008376_p19 | phage terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 9949 | 11670 |
| YP_764464.2 | NC_008376_p8 | recombination protein U | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 4615 | 5121 |
| YP_764511.1 | NC_008376_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34260 | 34451 |
| YP_764495.1 | NC_008376_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26341 | 26553 |
| YP_764485.1 | NC_008376_p31 | TMP repeat protein | phrog_58 | tail length tape measure protein | tail | 1 | 17338 | 20205 |
| YP_001504370.1 | NC_008376_p15 | hypothetical protein | phrog_32677 | unknown function | unknown function | 1 | 8257 | 8418 |
| YP_764480.1 | NC_008376_p26 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 15502 | 15876 |