Genomic map of Geobacillus phage GBSV1 (NC_008376)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008376
Definition
Geobacillus phage GBSV1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Svunavirus.
DB of origin
REFSEQ
Length
34683
Host Name
Geobacillus sp. 6k51
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
44.37
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_764482.1 NC_008376_p28 major tail protein phrog_88 major tail protein tail 1 16184 16768
YP_764503.1 NC_008376_p47 hypothetical protein phrog_87 metallo-protease other -1 31341 31784
YP_764474.1 NC_008376_p20 phage portal protein phrog_12 portal protein head and packaging 1 11675 12895
YP_764458.1 NC_008376_p2 DNA-binding phage-related protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 1231 2100
YP_764492.1 NC_008376_p37 hypothetical protein phrog_30729 unknown function unknown function -1 25158 25373
YP_001504369.1 NC_008376_p11 hypothetical protein phrog_29429 unknown function unknown function 1 5584 5772
YP_764478.1 NC_008376_p24 hypothetical protein phrog_2550 unknown function unknown function 1 14926 15207
YP_764479.1 NC_008376_p25 hypothetical protein phrog_1951 head-tail adaptor connector 1 15204 15509
YP_764504.1 NC_008376_p48 immunity repressor protein phrog_8 transcriptional regulator transcription regulation -1 31805 32251
YP_764465.1 NC_008376_p9 hypothetical protein phrog_36164 unknown function unknown function 1 5293 5520
YP_764471.1 NC_008376_p17 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9213 9494
YP_764498.1 NC_008376_p42 DNA segregation protein phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 27528 28724
YP_764510.1 NC_008376_p53 hypothetical protein phrog_26597 unknown function unknown function 1 33971 34246
YP_764490.1 NC_008376_p35 phage-related lysis protein phrog_199 holin lysis 1 24035 24448
YP_764493.1 NC_008376_p38 late competence protein phrog_7043 tail protein tail -1 25374 26219
YP_764486.1 NC_008376_p32 hypothetical protein phrog_33 distal tail protein Dit tail 1 20205 20927
YP_764466.1 NC_008376_p10 hypothetical protein phrog_28900 unknown function unknown function 1 5517 5651
YP_764463.2 NC_008376_p7 hypothetical protein phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 4114 4605
YP_764457.1 NC_008376_p1 YqaJ phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 269 1234
YP_764481.1 NC_008376_p27 aminopeptidase phrog_78 tail terminator connector 1 15873 16187
YP_764505.1 NC_008376_p49 repressor protein phrog_3 transcriptional repressor transcription regulation 1 32414 32650
YP_764462.1 NC_008376_p5 hypothetical protein phrog_31962 unknown function unknown function 1 3686 3913
YP_764507.1 NC_008376_p51 phage associated-antirepressor phrog_130 anti-repressor Ant transcription regulation 1 32838 33398
YP_764491.1 NC_008376_p36 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 24445 25125
YP_764461.2 NC_008376_p4 Similar to Bacillus virus 1 protein YP_001425588 phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 2887 3675
YP_764483.1 NC_008376_p29 hypothetical protein phrog_709 unknown function unknown function 1 16772 17119
YP_764472.1 NC_008376_p18 hypothetical protein phrog_361 terminase small subunit head and packaging 1 9596 9952
YP_764467.1 NC_008376_p12 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 5863 6318
YP_764475.1 NC_008376_p21 phage prohead phrog_80 head maturation protease head and packaging 1 12870 13478
YP_001504368.1 NC_008376_p6 Similar to Bacillus virus 1 protein YP_001425590 phrog_10675 unknown function unknown function 1 3913 4095
YP_764508.1 NC_008376_p52 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 33480 33968
YP_764477.1 NC_008376_p23 hypothetical protein phrog_3673 Arc-like repressor transcription regulation 1 14738 14929
YP_764484.1 NC_008376_p30 hypothetical protein phrog_3033 unknown function unknown function 1 17173 17322
YP_764459.1 NC_008376_p3 phage replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 2142 3008
YP_764489.1 NC_008376_p34 hypothetical protein phrog_25763 unknown function unknown function 1 22639 24024
YP_764497.1 NC_008376_p41 hypothetical protein singleton unknown function unknown function 1 27092 27526
YP_764499.2 NC_008376_p43 hypothetical protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 28705 29385
YP_764496.1 NC_008376_p40 HTH_3 phrog_3 transcriptional repressor transcription regulation -1 26591 26815
YP_764506.1 NC_008376_p50 hypothetical protein phrog_2977 anti-repressor transcription regulation 1 32647 32802
YP_764470.1 NC_008376_p16 hypothetical protein phrog_38019 unknown function unknown function 1 8539 9180
YP_764500.1 NC_008376_p44 hypothetical protein phrog_32993 unknown function unknown function 1 29401 29580
YP_764469.1 NC_008376_p14 GepA protein phrog_10390 unknown function unknown function 1 7229 7978
YP_764468.1 NC_008376_p13 hypothetical protein phrog_4012 unknown function unknown function 1 6501 7226
YP_764501.1 NC_008376_p45 DNA integration/recombination protein phrog_1 integrase integration and excision -1 29865 31049
YP_764502.1 NC_008376_p46 hypothetical protein phrog_15228 unknown function unknown function -1 31052 31234
YP_764476.1 NC_008376_p22 phage major capsid protein phrog_10 major head protein head and packaging 1 13441 14718
YP_764488.2 NC_008376_p33 hypothetical protein phrog_22322 tail protein tail 1 20937 22625
YP_764473.1 NC_008376_p19 phage terminase phrog_9 terminase large subunit head and packaging 1 9949 11670
YP_764464.2 NC_008376_p8 recombination protein U phrog_843 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 4615 5121
YP_764511.1 NC_008376_p54 hypothetical protein singleton unknown function unknown function 1 34260 34451
YP_764495.1 NC_008376_p39 hypothetical protein singleton unknown function unknown function 1 26341 26553
YP_764485.1 NC_008376_p31 TMP repeat protein phrog_58 tail length tape measure protein tail 1 17338 20205
YP_001504370.1 NC_008376_p15 hypothetical protein phrog_32677 unknown function unknown function 1 8257 8418
YP_764480.1 NC_008376_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 15502 15876