Genomic map of Stx2-converting phage 86 (Stx2-converting bacteriophage 8) (NC_008464)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008464
Definition
Stx2-converting phage 86, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus.
DB of origin
REFSEQ
Length
60238
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
49.06
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_794096.1 NC_008464_p49 hypothetical protein phrog_303 unknown function unknown function -1 44127 44408
YP_794114.1 NC_008464_p67 replication protein O phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism 1 52229 53128
YP_794123.1 NC_008464_p76 protein ninF phrog_672 unknown function unknown function 1 57347 57517
YP_794104.1 NC_008464_p57 hypothetical protein phrog_1636 unknown function unknown function -1 47069 47539
YP_794092.1 NC_008464_p45 hypothetical protein phrog_60 unknown function unknown function -1 42034 42489
YP_794054.1 NC_008464_p7 lysozyme protein R phrog_7 endolysin lysis 1 5252 5785
YP_794049.1 NC_008464_p2 shiga toxin 2 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 972 1241
YP_794115.1 NC_008464_p68 replication protein P phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 53103 54554
YP_794060.1 NC_008464_p13 terminase large subunit phrog_2 terminase large subunit head and packaging 1 8771 10477
YP_794102.1 NC_008464_p55 host killing protein Kil phrog_2461 Kil protein for bacterial septation inhibition other -1 46602 46871
YP_794118.1 NC_008464_p71 hypothetical protein phrog_9493 unknown function unknown function 1 55473 55655
YP_794075.1 NC_008464_p28 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 23570 24187
YP_794097.1 NC_008464_p50 hypothetical protein phrog_292 unknown function unknown function -1 44419 44610
YP_794074.1 NC_008464_p27 hypothetical protein phrog_557 outer membrane protein other 1 23283 23564
YP_794121.1 NC_008464_p74 DNA N-6-adenine methyltransferase Dam phrog_111 DNA methyltransferase other 1 56644 57171
YP_794084.1 NC_008464_p37 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 38494 38676
YP_794083.1 NC_008464_p36 integrase phrog_1 integrase integration and excision 1 37341 38510
YP_794106.1 NC_008464_p59 hypothetical protein phrog_4063 unknown function unknown function -1 48471 48635
YP_794098.1 NC_008464_p51 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 44762 45442
YP_794056.1 NC_008464_p9 endopeptidase Rz phrog_13 Rz-like spanin lysis 1 6786 7250
YP_794119.1 NC_008464_p72 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 55636 56052
YP_794082.1 NC_008464_p35 hypothetical protein phrog_616 unknown function unknown function 1 28647 36998
YP_794063.1 NC_008464_p16 virion structural protein phrog_334 major head protein head and packaging 1 13810 15024
YP_794085.1 NC_008464_p38 hypothetical protein phrog_1888 unknown function unknown function -1 38755 39123
YP_794105.1 NC_008464_p58 anti-termination protein N phrog_271 anti-termination protein N-like transcription regulation -1 47598 47981
YP_794055.1 NC_008464_p8 anti-repressor protein Ant phrog_524 anti-repressor Ant transcription regulation 1 6060 6629
YP_794077.1 NC_008464_p30 hypothetical protein phrog_610 unknown function unknown function 1 25442 25843
YP_794111.1 NC_008464_p64 regulatory protein Cro phrog_35 transcriptional repressor transcription regulation 1 51395 51622
YP_794050.1 NC_008464_p3 hypothetical protein phrog_143 unknown function unknown function 1 1727 3622
YP_794093.1 NC_008464_p46 hypothetical protein phrog_12350 unknown function unknown function -1 42697 43164
YP_794065.1 NC_008464_p18 hypothetical protein phrog_482 unknown function unknown function 1 15491 15979
YP_794078.1 NC_008464_p31 hypothetical protein phrog_611 unknown function unknown function 1 25937 26590
YP_794064.1 NC_008464_p17 hypothetical protein phrog_486 virion structural protein head and packaging 1 15079 15468
YP_794128.1 NC_008464_p81 DNA modification methylase phrog_14488 DNA methyltransferase other 1 59704 59856
YP_794053.1 NC_008464_p6 hypothetical protein phrog_1853 unknown function unknown function -1 4809 5123
YP_794067.1 NC_008464_p20 hypothetical protein phrog_399 structural protein head and packaging 1 16526 17176
YP_794058.1 NC_008464_p11 lipoprotein Bor phrog_260 Bor-like outer membrane protein other -1 7282 7575
YP_794052.1 NC_008464_p5 hypothetical protein phrog_1085 unknown function unknown function 1 3993 4799
YP_794112.1 NC_008464_p65 regulatory protein CII phrog_191 CII-like transcriptional activator transcription regulation 1 51761 52057
YP_794059.1 NC_008464_p12 terminase small subunit phrog_370 terminase small subunit head and packaging 1 7984 8790
YP_794057.1 NC_008464_p10 outer membrane lipoprotein Rz1 precursor phrog_3198 Rz-like spanin lysis 1 7006 7191
YP_794073.1 NC_008464_p26 tail tip fiber protein phrog_496 tail fiber protein tail 1 22000 23268
YP_794094.1 NC_008464_p47 hypothetical protein phrog_250 unknown function unknown function -1 43037 43810
YP_794095.1 NC_008464_p48 DksA-like zinc finger domain containing protein phrog_54 DksA-like zinc-finger protein other -1 43807 44028
YP_794091.1 NC_008464_p44 hypothetical protein phrog_924 unknown function unknown function -1 41657 42037
YP_794089.1 NC_008464_p42 phage anti-repressor protein AntB phrog_377 anti-repressor Ant transcription regulation -1 40395 41018
YP_794066.1 NC_008464_p19 hypothetical protein phrog_437 virion structural protein head and packaging 1 16026 16526
YP_794100.1 NC_008464_p53 host-nuclease inhibitor protein Gam phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 46230 46526
YP_794086.1 NC_008464_p39 adenine methylase phrog_359 DNA methyltransferase other -1 39326 39958
YP_794088.1 NC_008464_p41 hypothetical protein phrog_676 unknown function unknown function -1 40185 40352
YP_794125.1 NC_008464_p78 protein ninG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 58232 58837
YP_794081.1 NC_008464_p34 hypothetical protein phrog_601 unknown function unknown function 1 27312 28577
YP_794107.1 NC_008464_p60 serine/threonine protein kinases phrog_2361 serine-threonine kinase other -1 48638 49684
YP_794080.1 NC_008464_p33 hypothetical protein phrog_594 unknown function unknown function 1 27050 27301
YP_794116.1 NC_008464_p69 hypothetical protein phrog_2239 unknown function unknown function 1 54554 54823
YP_794124.1 NC_008464_p77 DNA-binding protein Roi phrog_63 anti-repressor Ant transcription regulation 1 57510 58232
YP_794101.1 NC_008464_p54 host-nuclease inhibitor protein Gam singleton unknown function unknown function -1 46495 46647
YP_794068.1 NC_008464_p21 long tail fiber protein phrog_366 tail fiber protein tail 1 17173 19194
YP_794113.1 NC_008464_p66 hypothetical protein phrog_1913 tail protein tail 1 52090 52236
YP_794099.1 NC_008464_p52 recombination protein Bet phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 45439 46224
YP_794070.1 NC_008464_p23 phage superinfection exclusion protein Cor like protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 19828 20055
YP_794061.1 NC_008464_p14 phage portal protein phrog_156 portal protein head and packaging 1 10477 12621
YP_794069.1 NC_008464_p22 hypothetical protein phrog_1121 tail fiber adhesin tail 1 19270 19815
YP_794108.1 NC_008464_p61 hypothetical protein phrog_3875 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 49678 50139
YP_794126.1 NC_008464_p79 protein ninH phrog_268 unknown function unknown function 1 58834 59028
YP_794110.1 NC_008464_p63 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 50609 51316
YP_794120.1 NC_008464_p73 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56045 56647
YP_794109.1 NC_008464_p62 hypothetical protein phrog_3467 unknown function unknown function -1 50207 50548
YP_794071.1 NC_008464_p24 hypothetical protein phrog_32751 unknown function unknown function 1 20106 20252
YP_794103.1 NC_008464_p56 regulatory protein CIII phrog_550 CIII anti-termination transcription regulation -1 46714 46878
YP_794072.1 NC_008464_p25 hypothetical protein phrog_511 internal virion protein head and packaging 1 20303 22003
YP_794122.1 NC_008464_p75 protein ninE phrog_288 unknown function unknown function 1 57168 57350
YP_794127.1 NC_008464_p80 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 59021 59455
YP_794048.1 NC_008464_p1 shiga toxin 2 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 1 960
YP_794090.1 NC_008464_p43 hypothetical protein singleton unknown function unknown function 1 41017 41610
YP_794079.1 NC_008464_p32 hypothetical protein phrog_596 unknown function unknown function 1 26593 27039
YP_794062.1 NC_008464_p15 hypothetical protein phrog_479 unknown function unknown function 1 12779 13786
YP_794117.1 NC_008464_p70 hypothetical protein phrog_1165 unknown function unknown function 1 54896 55102
YP_794087.1 NC_008464_p40 hypothetical protein phrog_8038 unknown function unknown function -1 39955 40185
YP_794051.1 NC_008464_p4 lysis protein S phrog_20 holin lysis 1 3773 3988
YP_794076.1 NC_008464_p29 outer membrane protein Lom precursor phrog_108 Lom outer membrane protein other 1 24278 25012