Genomic map of Microcystis aeruginosa phage Ma-LMM01 (NC_008562)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008562
Definition
Microcystis phage Ma-LMM01 DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
162109
Host Name
Microcystis aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
184
%GC
45.95
Number of singletons
29
Number of paralogs
23

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_851064.1 NC_008562_p50 hypothetical protein singleton unknown function unknown function -1 35879 36091
YP_851021.1 NC_008562_p7 hypothetical protein phrog_31605 unknown function unknown function -1 7346 7780
YP_851168.1 NC_008562_p154 hypothetical protein phrog_4393 unknown function unknown function -1 140609 140818
YP_851136.1 NC_008562_p122 hypothetical protein singleton unknown function unknown function -1 126494 126721
YP_851102.1 NC_008562_p88 hypothetical protein phrog_29398 unknown function unknown function 1 74913 75581
YP_851059.1 NC_008562_p45 hypothetical protein phrog_37791 unknown function unknown function 1 32748 33689
YP_851029.1 NC_008562_p15 hypothetical protein singleton unknown function unknown function 1 13338 13463
YP_851113.1 NC_008562_p99 hypothetical protein phrog_29307 unknown function unknown function 1 91207 91560
YP_851154.1 NC_008562_p140 hypothetical protein phrog_4393 unknown function unknown function -1 137532 137687
YP_851050.1 NC_008562_p36 hypothetical protein phrog_30884 unknown function unknown function -1 26928 27611
YP_851173.1 NC_008562_p159 hypothetical protein phrog_32406 unknown function unknown function -1 142399 142680
YP_851149.1 NC_008562_p135 transposase phrog_506 transposase integration and excision -1 134712 135884
YP_851049.1 NC_008562_p35 hypothetical protein singleton unknown function unknown function -1 26606 26938
YP_851077.1 NC_008562_p63 hypothetical protein phrog_32927 unknown function unknown function -1 42567 43226
YP_851198.1 NC_008562_p184 hypothetical protein phrog_609 RIIB lysis inhibitor lysis -1 161274 162089
YP_851118.1 NC_008562_p104 hypothetical protein phrog_38246 unknown function unknown function -1 96683 97483
YP_851085.1 NC_008562_p71 hypothetical protein singleton unknown function unknown function 1 53941 54459
YP_851134.1 NC_008562_p120 hypothetical protein phrog_29513 unknown function unknown function 1 117618 126314
YP_851035.1 NC_008562_p21 hypothetical protein phrog_30125 unknown function unknown function 1 17250 17978
YP_851036.1 NC_008562_p22 hypothetical protein phrog_30946 unknown function unknown function -1 17964 18128
YP_851069.1 NC_008562_p55 hypothetical protein phrog_33306 unknown function unknown function -1 38096 38272
YP_851196.1 NC_008562_p182 hypothetical protein phrog_38206 unknown function unknown function -1 160333 160542
YP_851157.1 NC_008562_p143 hypothetical protein phrog_4393 unknown function unknown function -1 138050 138238
YP_851043.1 NC_008562_p29 hypothetical protein phrog_31979 unknown function unknown function -1 22169 22759
YP_851020.1 NC_008562_p6 ribonucleoside-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 5113 7341
YP_851081.1 NC_008562_p67 hypothetical protein phrog_35503 unknown function unknown function -1 50915 51319
YP_851066.1 NC_008562_p52 hypothetical protein phrog_36616 unknown function unknown function -1 36781 37011
YP_851116.1 NC_008562_p102 hypothetical protein singleton unknown function unknown function 1 92973 95762
YP_851127.1 NC_008562_p113 hypothetical protein phrog_37921 unknown function unknown function 1 111492 112640
YP_851030.1 NC_008562_p16 hypothetical protein phrog_36331 unknown function unknown function -1 13627 14169
YP_851150.1 NC_008562_p136 site-specific integrase-resolvase phrog_6620 transposase integration and excision -1 135862 136470
YP_851115.1 NC_008562_p101 hypothetical protein phrog_6 baseplate wedge subunit tail 1 92000 92980
YP_851158.1 NC_008562_p144 hypothetical protein phrog_4393 unknown function unknown function -1 138225 138464
YP_851022.1 NC_008562_p8 recA recombinase phrog_97 UvsX-like recombinase other -1 7777 8841
YP_851167.1 NC_008562_p153 hypothetical protein phrog_4393 unknown function unknown function -1 140458 140622
YP_851151.1 NC_008562_p137 hypothetical protein phrog_4393 unknown function unknown function -1 136752 136943
YP_851171.1 NC_008562_p157 hypothetical protein phrog_4393 unknown function unknown function -1 141155 141397
YP_851180.1 NC_008562_p166 superfamily II DNA/RNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 146894 148345
YP_851170.1 NC_008562_p156 hypothetical protein phrog_4393 unknown function unknown function -1 141004 141189
YP_851145.1 NC_008562_p131 hypothetical protein phrog_4806 histidyl tRNA synthetase DNA, RNA and nucleotide metabolism -1 131837 132637
YP_851037.1 NC_008562_p23 hypothetical protein phrog_34084 unknown function unknown function -1 18360 18740
YP_851096.1 NC_008562_p82 hypothetical protein singleton unknown function unknown function 1 68990 69238
YP_851097.1 NC_008562_p83 hypothetical protein phrog_113 portal protein head and packaging 1 69235 70575
YP_851104.1 NC_008562_p90 hypothetical protein phrog_34839 unknown function unknown function 1 77468 78166
YP_851129.1 NC_008562_p115 hypothetical protein phrog_30675 unknown function unknown function 1 113457 113825
YP_851042.1 NC_008562_p28 hypothetical protein phrog_31619 unknown function unknown function -1 21685 22179
YP_851041.1 NC_008562_p27 hypothetical protein singleton unknown function unknown function -1 21566 21688
YP_851152.1 NC_008562_p138 hypothetical protein phrog_4393 unknown function unknown function -1 136930 137118
YP_851146.1 NC_008562_p132 hypothetical protein phrog_36340 unknown function unknown function -1 132642 132983
YP_851068.1 NC_008562_p54 hypothetical protein phrog_28585 unknown function unknown function -1 37513 38043
YP_851125.1 NC_008562_p111 hypothetical protein phrog_37225 unknown function unknown function 1 107955 109535
YP_851093.1 NC_008562_p79 hypothetical protein phrog_30042 unknown function unknown function 1 57441 57716
YP_851065.1 NC_008562_p51 hypothetical protein phrog_28475 unknown function unknown function 1 36090 36773
YP_851089.1 NC_008562_p75 hypothetical protein singleton unknown function unknown function 1 55882 56049
YP_851143.1 NC_008562_p129 hypothetical protein singleton unknown function unknown function -1 130726 131064
YP_851076.1 NC_008562_p62 hypothetical protein phrog_18508 kinase other -1 41679 42509
YP_851178.1 NC_008562_p164 hypothetical protein phrog_10346 unknown function unknown function 1 146035 146298
YP_851027.1 NC_008562_p13 hypothetical protein phrog_2018 unknown function unknown function -1 10636 11073
YP_851084.1 NC_008562_p70 hypothetical protein phrog_30714 unknown function unknown function 1 53039 53476
YP_851190.1 NC_008562_p176 hypothetical protein phrog_29400 unknown function unknown function -1 155656 156759
YP_851047.1 NC_008562_p33 hypothetical protein singleton unknown function unknown function 1 26239 26418
YP_851098.1 NC_008562_p84 hypothetical protein phrog_32834 unknown function unknown function -1 70568 70990
YP_851052.1 NC_008562_p38 hypothetical protein singleton unknown function unknown function -1 28829 28954
YP_851195.1 NC_008562_p181 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 159632 160306
YP_851166.1 NC_008562_p152 hypothetical protein phrog_4393 unknown function unknown function -1 140298 140471
YP_851132.1 NC_008562_p118 terminase phrog_2 terminase large subunit head and packaging 1 115106 116884
YP_851079.1 NC_008562_p65 hypothetical protein phrog_37209 unknown function unknown function -1 48893 49672
YP_851091.1 NC_008562_p77 hypothetical protein phrog_36319 unknown function unknown function 1 56939 57187
YP_851147.1 NC_008562_p133 hypothetical protein phrog_34685 unknown function unknown function -1 132973 133473
YP_851107.1 NC_008562_p93 hypothetical protein phrog_34291 unknown function unknown function 1 81316 83187
YP_851063.1 NC_008562_p49 hypothetical protein singleton unknown function unknown function -1 35776 35913
YP_851138.1 NC_008562_p124 hypothetical protein phrog_29168 unknown function unknown function -1 127412 127858
YP_851114.1 NC_008562_p100 hypothetical protein singleton unknown function unknown function 1 91563 91940
YP_851119.1 NC_008562_p105 hypothetical protein phrog_32934 unknown function unknown function 1 97622 99355
YP_851153.1 NC_008562_p139 hypothetical protein phrog_4393 unknown function unknown function -1 137257 137517
YP_851112.1 NC_008562_p98 hypothetical protein phrog_37437 unknown function unknown function 1 87543 91076
YP_851099.1 NC_008562_p85 hypothetical protein phrog_32941 unknown function unknown function 1 71028 72380
YP_851182.1 NC_008562_p168 hypothetical protein singleton unknown function unknown function -1 149617 150303
YP_851075.1 NC_008562_p61 hypothetical protein phrog_21731 unknown function unknown function -1 41222 41686
YP_851087.1 NC_008562_p73 hypothetical protein phrog_33575 unknown function unknown function 1 55259 55621
YP_851105.1 NC_008562_p91 phage tail sheath protein phrog_30392 tail sheath tail 1 78218 80542
YP_851175.1 NC_008562_p161 hypothetical protein phrog_33590 unknown function unknown function -1 143800 144255
YP_851135.1 NC_008562_p121 hypothetical protein singleton unknown function unknown function -1 126316 126504
YP_851120.1 NC_008562_p106 lysine/ornithine N-monooxygenase phrog_29209 unknown function unknown function 1 99480 100493
YP_851179.1 NC_008562_p165 hypothetical protein phrog_36817 unknown function unknown function -1 146295 146894
YP_851080.1 NC_008562_p66 hypothetical protein phrog_28304 unknown function unknown function -1 50144 50659
YP_851016.1 NC_008562_p2 ribonucleoside-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 2449 3495
YP_851185.1 NC_008562_p171 hypothetical protein phrog_32617 unknown function unknown function -1 151605 152753
YP_851078.1 NC_008562_p64 hypothetical protein phrog_30979 unknown function unknown function -1 43811 48832
YP_851181.1 NC_008562_p167 hypothetical protein phrog_28354 unknown function unknown function -1 148342 149568
YP_851191.1 NC_008562_p177 hypothetical protein phrog_34739 unknown function unknown function -1 156716 157282
YP_851156.1 NC_008562_p142 hypothetical protein phrog_4393 unknown function unknown function -1 137834 138049
YP_851111.1 NC_008562_p97 hypothetical protein phrog_31533 unknown function unknown function 1 86452 87546
YP_851121.1 NC_008562_p107 hypothetical protein phrog_1394 virion structural protein head and packaging 1 100493 101050
YP_851058.1 NC_008562_p44 hypothetical protein singleton unknown function unknown function 1 32400 32642
YP_851048.1 NC_008562_p34 hypothetical protein phrog_34510 unknown function unknown function -1 26351 26599
YP_851086.1 NC_008562_p72 hypothetical protein phrog_2554 unknown function unknown function -1 54512 55231
YP_851189.1 NC_008562_p175 hypothetical protein phrog_27831 unknown function unknown function -1 155187 155558
YP_851188.1 NC_008562_p174 hypothetical protein phrog_31813 unknown function unknown function -1 154027 155163
YP_851148.1 NC_008562_p134 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 133470 134663
YP_851051.1 NC_008562_p37 hypothetical protein phrog_18508 kinase other -1 28025 28765
YP_851101.1 NC_008562_p87 hypothetical protein phrog_28926 unknown function unknown function 1 73749 74855
YP_851054.1 NC_008562_p40 hypothetical protein phrog_7946 unknown function unknown function 1 29780 30211
YP_851060.1 NC_008562_p46 hypothetical protein singleton unknown function unknown function -1 33824 34039
YP_851088.1 NC_008562_p74 hypothetical protein phrog_37553 unknown function unknown function 1 55590 55871
YP_851133.1 NC_008562_p119 hypothetical protein phrog_38487 unknown function unknown function 1 117001 117636
YP_851155.1 NC_008562_p141 hypothetical protein phrog_4393 unknown function unknown function -1 137674 137883
YP_851095.1 NC_008562_p81 hypothetical protein phrog_32670 unknown function unknown function 1 68445 68807
YP_851094.1 NC_008562_p80 hypothetical protein phrog_31006 unknown function unknown function -1 57700 68388
YP_851117.1 NC_008562_p103 hypothetical protein phrog_35606 unknown function unknown function 1 95771 96586
YP_851019.1 NC_008562_p5 phycobilisome degradation protein NblA singleton unknown function unknown function -1 4899 5138
YP_851163.1 NC_008562_p149 hypothetical protein phrog_4393 unknown function unknown function -1 139547 139750
YP_851108.1 NC_008562_p94 hypothetical protein phrog_30576 baseplate protein tail 1 83187 84752
YP_851061.1 NC_008562_p47 hypothetical protein singleton unknown function unknown function 1 34602 34763
YP_851162.1 NC_008562_p148 hypothetical protein phrog_4393 unknown function unknown function -1 139368 139523
YP_851130.1 NC_008562_p116 hypothetical protein phrog_32126 unknown function unknown function 1 113827 114297
YP_851186.1 NC_008562_p172 hypothetical protein phrog_38706 unknown function unknown function -1 153022 153285
YP_851074.1 NC_008562_p60 hypothetical protein phrog_28949 unknown function unknown function -1 40662 41066
YP_851062.1 NC_008562_p48 hypothetical protein phrog_27453 unknown function unknown function -1 35477 35755
YP_851192.1 NC_008562_p178 DNA polymerase phrog_35406 DNA polymerase DNA, RNA and nucleotide metabolism -1 157270 158232
YP_851106.1 NC_008562_p92 hypothetical protein phrog_34837 unknown function unknown function 1 80547 81257
YP_851070.1 NC_008562_p56 hypothetical protein phrog_29512 unknown function unknown function -1 38265 38516
YP_851172.1 NC_008562_p158 hypothetical protein phrog_9974 unknown function unknown function -1 141947 142273
YP_851092.1 NC_008562_p78 hypothetical protein phrog_34136 unknown function unknown function 1 57184 57447
YP_851055.1 NC_008562_p41 hypothetical protein phrog_3545 unknown function unknown function 1 30742 31509
YP_851176.1 NC_008562_p162 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 144239 144850
YP_851090.1 NC_008562_p76 hypothetical protein phrog_35244 unknown function unknown function 1 56049 56951
YP_851056.1 NC_008562_p42 hypothetical protein phrog_28130 unknown function unknown function 1 31515 32003
YP_851033.1 NC_008562_p19 hypothetical protein phrog_38064 tail collar protein tail 1 14713 15720
YP_851103.1 NC_008562_p89 hypothetical protein phrog_28006 unknown function unknown function 1 75594 77471
YP_851046.1 NC_008562_p32 transposase phrog_2577 transposase integration and excision 1 25710 26129
YP_851123.1 NC_008562_p109 hypothetical protein phrog_877 unknown function unknown function 1 105120 107642
YP_851110.1 NC_008562_p96 hypothetical protein phrog_33054 unknown function unknown function 1 85950 86462
YP_851018.1 NC_008562_p4 hypothetical protein phrog_34617 unknown function unknown function -1 4294 4854
YP_851067.1 NC_008562_p53 hypothetical protein singleton unknown function unknown function -1 37004 37411
YP_851039.1 NC_008562_p25 serine/threonine protein phosphatase phrog_28031 unknown function unknown function -1 19926 21146
YP_851015.1 NC_008562_p1 rIIA-like protein phrog_38678 RIIA lysis inhibitor lysis -1 9 2417
YP_851071.1 NC_008562_p57 hypothetical protein phrog_29647 unknown function unknown function -1 38595 39641
YP_851031.1 NC_008562_p17 hypothetical protein phrog_32722 unknown function unknown function -1 14166 14525
YP_851193.1 NC_008562_p179 hypothetical protein singleton unknown function unknown function -1 158210 158365
YP_851144.1 NC_008562_p130 hypothetical protein phrog_28997 unknown function unknown function -1 131113 131610
YP_851174.1 NC_008562_p160 helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 142680 143828
YP_851034.1 NC_008562_p20 thymidylate synthase phrog_36506 thymidylate synthase DNA, RNA and nucleotide metabolism -1 15717 17192
YP_851024.1 NC_008562_p10 hypothetical protein phrog_33589 unknown function unknown function -1 9535 10056
YP_851161.1 NC_008562_p147 hypothetical protein phrog_4393 unknown function unknown function -1 139054 139260
YP_851184.1 NC_008562_p170 hypothetical protein phrog_31277 unknown function unknown function -1 151375 151545
YP_851023.1 NC_008562_p9 prophage antirepressor phrog_9976 anti-repressor transcription regulation -1 8925 9413
YP_851038.1 NC_008562_p24 prophage antirepressor phrog_130 anti-repressor Ant transcription regulation -1 18772 19584
YP_851072.1 NC_008562_p58 hypothetical protein phrog_30452 unknown function unknown function -1 39647 39889
YP_851165.1 NC_008562_p151 hypothetical protein phrog_4393 unknown function unknown function -1 140096 140329
YP_851040.1 NC_008562_p26 hypothetical protein singleton unknown function unknown function -1 21359 21562
YP_851187.1 NC_008562_p173 uracil-DNA glycosylase phrog_35496 unknown function unknown function -1 153269 154024
YP_851073.1 NC_008562_p59 hypothetical protein phrog_30422 unknown function unknown function -1 39909 40505
YP_851017.1 NC_008562_p3 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 3500 4294
YP_851032.1 NC_008562_p18 hypothetical protein phrog_28280 unknown function unknown function -1 14530 14736
YP_851122.1 NC_008562_p108 hypothetical protein phrog_877 unknown function unknown function 1 101054 105133
YP_851025.1 NC_008562_p11 hypothetical protein singleton unknown function unknown function -1 10044 10169
YP_851137.1 NC_008562_p123 hypothetical protein phrog_32230 unknown function unknown function -1 126721 127431
YP_851164.1 NC_008562_p150 hypothetical protein phrog_4393 unknown function unknown function -1 139737 140057
YP_851128.1 NC_008562_p114 hypothetical protein singleton unknown function unknown function 1 112618 113463
YP_851177.1 NC_008562_p163 hypothetical protein phrog_36071 unknown function unknown function -1 145289 145915
YP_851026.1 NC_008562_p12 hypothetical protein singleton unknown function unknown function -1 10265 10663
YP_851183.1 NC_008562_p169 holB-like ATPase involved in DNA replication phrog_5846 clamp loader of DNA polymerase DNA, RNA and nucleotide metabolism -1 150291 151394
YP_851139.1 NC_008562_p125 hypothetical protein phrog_33176 unknown function unknown function -1 127908 129050
YP_851142.1 NC_008562_p128 Fe-S oxidoreductase phrog_16999 Fe-S oxidoreductase other -1 129804 130721
YP_851159.1 NC_008562_p145 hypothetical protein phrog_4393 unknown function unknown function -1 138433 138813
YP_851140.1 NC_008562_p126 hypothetical protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 129022 129567
YP_851045.1 NC_008562_p31 transposase phrog_506 transposase integration and excision -1 24416 25645
YP_851109.1 NC_008562_p95 lysozyme/metalloendopeptidase phrog_28672 metallo-endopeptidase other 1 84752 85945
YP_851169.1 NC_008562_p155 hypothetical protein phrog_4393 unknown function unknown function -1 140805 141017
YP_851100.1 NC_008562_p86 hypothetical protein phrog_30785 major head protein head and packaging 1 72407 73720
YP_851141.1 NC_008562_p127 hypothetical protein phrog_35726 unknown function unknown function -1 129616 129819
YP_851028.1 NC_008562_p14 hypothetical protein phrog_1735 unknown function unknown function -1 11045 13135
YP_851197.1 NC_008562_p183 phoH-like phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 160545 161216
YP_851126.1 NC_008562_p112 hypothetical protein singleton unknown function unknown function 1 109519 111477
YP_851131.1 NC_008562_p117 hypothetical protein singleton unknown function unknown function 1 114328 115116
YP_851124.1 NC_008562_p110 hypothetical protein singleton unknown function unknown function 1 107627 107962
YP_851160.1 NC_008562_p146 hypothetical protein phrog_4393 unknown function unknown function -1 138825 139067
YP_851083.1 NC_008562_p69 chitinase phrog_181 endolysin lysis 1 52314 53069
YP_851082.1 NC_008562_p68 hypothetical protein phrog_894 endolysin lysis 1 51615 52256
YP_851194.1 NC_008562_p180 3'-5' exonuclease phrog_31382 3'-5' exonuclease DNA, RNA and nucleotide metabolism -1 158352 159635
YP_851053.1 NC_008562_p39 hypothetical protein phrog_35690 unknown function unknown function 1 29163 29633
YP_851057.1 NC_008562_p43 hypothetical protein phrog_36693 unknown function unknown function 1 32096 32293
YP_851044.1 NC_008562_p30 hypothetical protein phrog_34692 unknown function unknown function -1 22746 24266