| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008695 |
Definition |
Archaeal BJ1 virus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
42271 |
Host Name |
Halorubrum |
Host domain |
Archaea |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
64.88 |
Number of singletons |
27 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_919065.1 | NC_008695_p38 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 18512 | 18817 |
| YP_919093.1 | NC_008695_p66 | protein of an unannotated phage | phrog_33719 | unknown function | unknown function | 1 | 36634 | 38226 |
| YP_919092.1 | NC_008695_p65 | protein of an unannotated phage | phrog_18406 | unknown function | unknown function | 1 | 35446 | 36633 |
| YP_919045.1 | NC_008695_p18 | protein of an unannotated phage | phrog_37137 | unknown function | unknown function | 1 | 8689 | 8949 |
| YP_919063.1 | NC_008695_p36 | protein of an unannotated phage | phrog_26506 | unknown function | unknown function | 1 | 17606 | 18058 |
| YP_919088.1 | NC_008695_p61 | protein of an unannotated phage | phrog_19457 | unknown function | unknown function | 1 | 32680 | 33177 |
| YP_919078.1 | NC_008695_p51 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 26461 | 26586 |
| YP_919028.1 | NC_008695_p1 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 130 | 990 |
| YP_919054.1 | NC_008695_p27 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 12668 | 12760 |
| YP_919066.1 | NC_008695_p39 | protein of an unannotated phage | phrog_37740 | unknown function | unknown function | 1 | 18814 | 19074 |
| YP_919079.1 | NC_008695_p52 | protein of an unannotated phage | phrog_26743 | unknown function | unknown function | 1 | 26590 | 27933 |
| YP_919056.1 | NC_008695_p29 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 13092 | 13262 |
| YP_919073.1 | NC_008695_p46 | protein of an unannotated phage | phrog_18714 | unknown function | unknown function | 1 | 22108 | 22416 |
| YP_919046.1 | NC_008695_p19 | protein of an unannotated phage | phrog_18310 | unknown function | unknown function | 1 | 8950 | 9153 |
| YP_919083.1 | NC_008695_p56 | protein of an unannotated phage | phrog_36181 | unknown function | unknown function | 1 | 29576 | 30451 |
| YP_919090.1 | NC_008695_p63 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 34444 | 34731 |
| YP_919031.1 | NC_008695_p4 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 2207 | 2425 |
| YP_919068.1 | NC_008695_p41 | protein of an unannotated phage | phrog_27334 | unknown function | unknown function | 1 | 19129 | 19806 |
| YP_919049.1 | NC_008695_p22 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 10022 | 10153 |
| YP_919084.1 | NC_008695_p57 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 30444 | 30761 |
| YP_919047.1 | NC_008695_p20 | protein of an unannotated phage | phrog_2440 | transcriptional regulator | transcription regulation | -1 | 9159 | 9446 |
| YP_919069.1 | NC_008695_p42 | protein of an unannotated phage | phrog_37636 | unknown function | unknown function | 1 | 19803 | 19982 |
| YP_919053.1 | NC_008695_p26 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 11946 | 12671 |
| YP_919057.1 | NC_008695_p30 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 13255 | 14700 |
| YP_919038.1 | NC_008695_p11 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 5208 | 5357 |
| YP_919050.1 | NC_008695_p23 | protein of an unannotated phage | phrog_18169 | unknown function | unknown function | 1 | 10153 | 10890 |
| YP_919082.1 | NC_008695_p55 | protein of an unannotated phage | phrog_17946 | unknown function | unknown function | 1 | 29222 | 29572 |
| YP_919067.1 | NC_008695_p40 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 19071 | 19241 |
| YP_919081.1 | NC_008695_p54 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 29040 | 29219 |
| YP_919097.1 | NC_008695_p70 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41840 | 42151 |
| YP_919058.1 | NC_008695_p31 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 13270 | 14487 |
| YP_919077.1 | NC_008695_p50 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 24427 | 26382 |
| YP_919074.1 | NC_008695_p47 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 22416 | 22577 |
| YP_919030.1 | NC_008695_p3 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 1980 | 2093 |
| YP_919034.1 | NC_008695_p7 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 3547 | 3993 |
| YP_919060.1 | NC_008695_p33 | protein of an unannotated phage | phrog_33103 | unknown function | unknown function | 1 | 14819 | 15307 |
| YP_919040.1 | NC_008695_p13 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 5571 | 5744 |
| YP_919085.1 | NC_008695_p58 | protein of an unannotated phage | phrog_18530 | unknown function | unknown function | 1 | 30758 | 31210 |
| YP_919095.1 | NC_008695_p68 | protein of an unannotated phage | phrog_26967 | unknown function | unknown function | 1 | 41059 | 41400 |
| YP_919039.1 | NC_008695_p12 | protein of an unannotated phage | phrog_31945 | unknown function | unknown function | 1 | 5350 | 5574 |
| YP_919086.1 | NC_008695_p59 | protein of an unannotated phage | phrog_25153 | unknown function | unknown function | 1 | 31207 | 31734 |
| YP_919032.1 | NC_008695_p5 | protein of an unannotated phage | phrog_9210 | unknown function | unknown function | -1 | 2541 | 3191 |
| YP_919059.1 | NC_008695_p32 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 14701 | 14826 |
| YP_919044.1 | NC_008695_p17 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 7919 | 8560 |
| YP_919041.1 | NC_008695_p14 | protein of an unannotated phage | phrog_17157 | unknown function | unknown function | 1 | 5741 | 5986 |
| YP_919061.1 | NC_008695_p34 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 15310 | 15531 |
| YP_919051.1 | NC_008695_p24 | protein of an unannotated phage | phrog_25628 | unknown function | unknown function | 1 | 10880 | 11806 |
| YP_919055.1 | NC_008695_p28 | protein of an unannotated phage | phrog_29061 | unknown function | unknown function | 1 | 12757 | 13092 |
| YP_919071.1 | NC_008695_p44 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 21840 | 21998 |
| YP_919052.1 | NC_008695_p25 | protein of an unannotated phage | phrog_36987 | unknown function | unknown function | 1 | 11803 | 11946 |
| YP_919042.1 | NC_008695_p15 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 5998 | 6417 |
| YP_919091.1 | NC_008695_p64 | protein of an unannotated phage | phrog_20675 | unknown function | unknown function | 1 | 34771 | 35439 |
| YP_919089.1 | NC_008695_p62 | protein of an unannotated phage | phrog_30850 | unknown function | unknown function | 1 | 33281 | 34408 |
| YP_919062.1 | NC_008695_p35 | protein of an unannotated phage | phrog_10371 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 15489 | 17603 |
| YP_919076.1 | NC_008695_p49 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 23080 | 24423 |
| YP_919075.1 | NC_008695_p48 | protein of an unannotated phage | phrog_1482 | terminase small subunit | head and packaging | 1 | 22574 | 23083 |
| YP_919036.1 | NC_008695_p9 | protein of an unannotated phage | phrog_27279 | unknown function | unknown function | 1 | 4456 | 4851 |
| YP_919035.1 | NC_008695_p8 | protein of an unannotated phage | phrog_26013 | unknown function | unknown function | 1 | 3993 | 4463 |
| YP_919033.1 | NC_008695_p6 | protein of an unannotated phage | phrog_38164 | unknown function | unknown function | -1 | 3178 | 3393 |
| YP_919043.1 | NC_008695_p16 | protein of an unannotated phage | phrog_7998 | unknown function | unknown function | 1 | 6637 | 7713 |
| YP_919087.1 | NC_008695_p60 | protein of an unannotated phage | phrog_18409 | minor tail protein | tail | 1 | 31766 | 32680 |
| YP_919072.1 | NC_008695_p45 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 22001 | 22111 |
| YP_919096.1 | NC_008695_p69 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41403 | 41843 |
| YP_919037.1 | NC_008695_p10 | protein of an unannotated phage | phrog_17897 | unknown function | unknown function | 1 | 4844 | 5218 |
| YP_919070.1 | NC_008695_p43 | protein of an unannotated phage | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 20365 | 21843 |
| YP_919029.1 | NC_008695_p2 | protein of an unannotated phage | phrog_6788 | unknown function | unknown function | 1 | 1146 | 1805 |
| YP_919094.1 | NC_008695_p67 | protein of an unannotated phage | phrog_18315 | unknown function | unknown function | 1 | 38229 | 40979 |
| YP_919048.1 | NC_008695_p21 | protein of an unannotated phage | phrog_4278 | unknown function | unknown function | 1 | 9660 | 10022 |
| YP_919080.1 | NC_008695_p53 | protein of an unannotated phage | phrog_1623 | virion structural protein | head and packaging | 1 | 27949 | 29031 |
| YP_919064.1 | NC_008695_p37 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 18055 | 18519 |