Genomic map of Escherichia phage N4 (NC_008720)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008720
Definition
Enterobacteria phage N4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enquatrovirus.
DB of origin
REFSEQ
Length
70153
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
41.3
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_950548.1 NC_008720_p70 hypothetical protein phrog_7213 unknown function unknown function 1 69055 69363
YP_950489.1 NC_008720_p11 hypothetical protein phrog_7827 unknown function unknown function 1 3282 3602
YP_950492.1 NC_008720_p14 hypothetical protein phrog_2072 unknown function unknown function 1 4148 4528
YP_950537.1 NC_008720_p59 94 kDa protein phrog_1216 portal protein head and packaging -1 54676 56967
YP_950509.1 NC_008720_p31 hypothetical protein phrog_7900 unknown function unknown function 1 14882 15115
YP_950544.1 NC_008720_p66 60 kDa protein phrog_29955 appendage connector -1 64233 65903
YP_950542.1 NC_008720_p64 hypothetical protein phrog_16150 tail assembly protein tail -1 58757 60010
YP_950484.1 NC_008720_p6 hypothetical protein phrog_7648 unknown function unknown function 1 2152 2310
YP_950536.1 NC_008720_p58 hypothetical protein phrog_2346 unknown function unknown function -1 54326 54673
YP_950525.1 NC_008720_p47 hypothetical protein phrog_7641 unknown function unknown function 1 31678 32112
YP_950516.1 NC_008720_p38 hypothetical protein phrog_4881 unknown function unknown function 1 22286 22813
YP_950506.1 NC_008720_p28 hypothetical protein singleton unknown function unknown function 1 13147 13389
YP_950543.1 NC_008720_p65 160 kDa protein phrog_15324 tail sheath and receptor binding protein tail -1 60043 64191
YP_950490.1 NC_008720_p12 hypothetical protein phrog_464 unknown function unknown function 1 3605 3973
YP_950491.1 NC_008720_p13 hypothetical protein phrog_13804 unknown function unknown function 1 3966 4151
YP_950514.1 NC_008720_p36 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 20462 20914
YP_950486.1 NC_008720_p8 hypothetical protein phrog_15592 unknown function unknown function 1 2593 2808
YP_950526.1 NC_008720_p48 hypothetical protein phrog_322 unknown function unknown function 1 33632 34003
YP_950513.1 NC_008720_p35 hypothetical protein phrog_6377 unknown function unknown function 1 20143 20538
YP_950480.1 NC_008720_p2 hypothetical protein phrog_4099 unknown function unknown function 1 586 1071
YP_950546.1 NC_008720_p68 hypothetical protein phrog_38 terminase large subunit head and packaging -1 66617 68209
YP_950487.1 NC_008720_p9 hypothetical protein phrog_464 unknown function unknown function 1 2805 3119
YP_950502.1 NC_008720_p24 hypothetical protein phrog_1297 ATPase other 1 9938 10996
YP_950500.1 NC_008720_p22 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 9381 9737
YP_950528.1 NC_008720_p50 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 34523 45025
YP_950507.1 NC_008720_p29 hypothetical protein phrog_9867 unknown function unknown function 1 13389 13850
YP_950481.1 NC_008720_p3 hypothetical protein phrog_2510 unknown function unknown function 1 1214 1528
YP_950497.1 NC_008720_p19 hypothetical protein phrog_1130 membrane protein moron, auxiliary metabolic gene and host takeover 1 8057 8263
YP_950501.1 NC_008720_p23 hypothetical protein phrog_23946 unknown function unknown function 1 9738 9908
YP_950535.1 NC_008720_p57 hypothetical protein phrog_2120 tail length tape measure protein tail -1 53083 54300
YP_950483.1 NC_008720_p5 hypothetical protein phrog_2010 unknown function unknown function 1 1944 2141
YP_950549.1 NC_008720_p71 hypothetical protein phrog_9160 unknown function unknown function 1 69574 69939
YP_950495.1 NC_008720_p17 32 kDa protein phrog_2973 Hoc-like head decoration head and packaging 1 6759 7598
YP_950550.1 NC_008720_p72 hypothetical protein phrog_19797 unknown function unknown function 1 69948 70076
YP_950482.1 NC_008720_p4 hypothetical protein phrog_2164 unknown function unknown function 1 1532 1969
YP_950517.1 NC_008720_p39 DNAP phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 22821 25400
YP_950518.1 NC_008720_p40 hypothetical protein phrog_5974 unknown function unknown function 1 25397 25735
YP_950545.1 NC_008720_p67 30 kDa protein phrog_2125 virion structural protein head and packaging -1 65900 66610
YP_950541.1 NC_008720_p63 hypothetical protein phrog_5211 unknown function unknown function -1 58321 58653
YP_950529.1 NC_008720_p51 66 kDa protein phrog_6126 virion structural protein head and packaging -1 45126 47060
YP_950479.1 NC_008720_p1 hypothetical protein phrog_5020 unknown function unknown function 1 154 480
YP_950499.1 NC_008720_p21 hypothetical protein phrog_7431 unknown function unknown function 1 9155 9379
YP_950547.1 NC_008720_p69 hypothetical protein phrog_2109 unknown function unknown function -1 68202 68894
YP_950538.1 NC_008720_p60 hypothetical protein phrog_6197 Rz-like spanin lysis -1 56976 57479
YP_950504.1 NC_008720_p26 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 12313 12819
YP_950493.1 NC_008720_p15 RNAP1 phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4603 5412
YP_950533.1 NC_008720_p55 hypothetical protein phrog_2130 unknown function unknown function -1 51177 51803
YP_950532.1 NC_008720_p54 hypothetical protein phrog_2050 virion structural protein head and packaging -1 50198 51097
YP_950531.1 NC_008720_p53 hypothetical protein phrog_2220 unknown function unknown function -1 47537 50194
YP_950524.1 NC_008720_p46 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31118 31675
YP_950508.1 NC_008720_p30 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 13843 14784
YP_950519.1 NC_008720_p41 hypothetical protein phrog_37456 unknown function unknown function 1 25738 26346
YP_950523.1 NC_008720_p45 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30321 31118
YP_950515.1 NC_008720_p37 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 20957 22276
YP_950512.1 NC_008720_p34 rIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 17985 20075
YP_950494.1 NC_008720_p16 RNAP2 phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 5460 6674
YP_950503.1 NC_008720_p25 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11164 12306
YP_950540.1 NC_008720_p62 hypothetical protein phrog_1356 holin lysis -1 58073 58336
YP_950520.1 NC_008720_p42 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 26343 27317
YP_950511.1 NC_008720_p33 rIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 15460 17985
YP_950522.1 NC_008720_p44 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29520 30275
YP_950539.1 NC_008720_p61 N-acetylmuramidase phrog_315 endolysin lysis -1 57460 58086
YP_950496.1 NC_008720_p18 hypothetical protein phrog_1510 superinfection exclusion moron, auxiliary metabolic gene and host takeover 1 7668 7982
YP_950527.1 NC_008720_p49 hypothetical protein phrog_872 unknown function unknown function 1 34003 34485
YP_950510.1 NC_008720_p32 hypothetical protein phrog_9004 unknown function unknown function 1 15108 15434
YP_950505.1 NC_008720_p27 hypothetical protein phrog_7594 unknown function unknown function 1 12833 13033
YP_950488.1 NC_008720_p10 hypothetical protein phrog_35919 unknown function unknown function 1 3106 3282
YP_950485.1 NC_008720_p7 hypothetical protein phrog_20789 unknown function unknown function 1 2310 2519
YP_950521.1 NC_008720_p43 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 27314 29461
YP_950530.1 NC_008720_p52 16.5 kDa protein phrog_2646 unknown function unknown function -1 47071 47523
YP_950534.1 NC_008720_p56 major coat protein phrog_1357 major head protein head and packaging -1 51866 53071
YP_950498.1 NC_008720_p20 hypothetical protein phrog_200 lipoprotein other 1 8256 9092