| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008720 |
Definition |
Enterobacteria phage N4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enquatrovirus. |
DB of origin |
REFSEQ |
Length |
70153 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
72 |
%GC |
41.3 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_950548.1 | NC_008720_p70 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 69055 | 69363 |
| YP_950489.1 | NC_008720_p11 | hypothetical protein | phrog_7827 | unknown function | unknown function | 1 | 3282 | 3602 |
| YP_950492.1 | NC_008720_p14 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 4148 | 4528 |
| YP_950537.1 | NC_008720_p59 | 94 kDa protein | phrog_1216 | portal protein | head and packaging | -1 | 54676 | 56967 |
| YP_950509.1 | NC_008720_p31 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 14882 | 15115 |
| YP_950544.1 | NC_008720_p66 | 60 kDa protein | phrog_29955 | appendage | connector | -1 | 64233 | 65903 |
| YP_950542.1 | NC_008720_p64 | hypothetical protein | phrog_16150 | tail assembly protein | tail | -1 | 58757 | 60010 |
| YP_950484.1 | NC_008720_p6 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 2152 | 2310 |
| YP_950536.1 | NC_008720_p58 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 54326 | 54673 |
| YP_950525.1 | NC_008720_p47 | hypothetical protein | phrog_7641 | unknown function | unknown function | 1 | 31678 | 32112 |
| YP_950516.1 | NC_008720_p38 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 22286 | 22813 |
| YP_950506.1 | NC_008720_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13147 | 13389 |
| YP_950543.1 | NC_008720_p65 | 160 kDa protein | phrog_15324 | tail sheath and receptor binding protein | tail | -1 | 60043 | 64191 |
| YP_950490.1 | NC_008720_p12 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 3605 | 3973 |
| YP_950491.1 | NC_008720_p13 | hypothetical protein | phrog_13804 | unknown function | unknown function | 1 | 3966 | 4151 |
| YP_950514.1 | NC_008720_p36 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 20462 | 20914 |
| YP_950486.1 | NC_008720_p8 | hypothetical protein | phrog_15592 | unknown function | unknown function | 1 | 2593 | 2808 |
| YP_950526.1 | NC_008720_p48 | hypothetical protein | phrog_322 | unknown function | unknown function | 1 | 33632 | 34003 |
| YP_950513.1 | NC_008720_p35 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 20143 | 20538 |
| YP_950480.1 | NC_008720_p2 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 586 | 1071 |
| YP_950546.1 | NC_008720_p68 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 66617 | 68209 |
| YP_950487.1 | NC_008720_p9 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 2805 | 3119 |
| YP_950502.1 | NC_008720_p24 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 9938 | 10996 |
| YP_950500.1 | NC_008720_p22 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9381 | 9737 |
| YP_950528.1 | NC_008720_p50 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34523 | 45025 |
| YP_950507.1 | NC_008720_p29 | hypothetical protein | phrog_9867 | unknown function | unknown function | 1 | 13389 | 13850 |
| YP_950481.1 | NC_008720_p3 | hypothetical protein | phrog_2510 | unknown function | unknown function | 1 | 1214 | 1528 |
| YP_950497.1 | NC_008720_p19 | hypothetical protein | phrog_1130 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 8057 | 8263 |
| YP_950501.1 | NC_008720_p23 | hypothetical protein | phrog_23946 | unknown function | unknown function | 1 | 9738 | 9908 |
| YP_950535.1 | NC_008720_p57 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 53083 | 54300 |
| YP_950483.1 | NC_008720_p5 | hypothetical protein | phrog_2010 | unknown function | unknown function | 1 | 1944 | 2141 |
| YP_950549.1 | NC_008720_p71 | hypothetical protein | phrog_9160 | unknown function | unknown function | 1 | 69574 | 69939 |
| YP_950495.1 | NC_008720_p17 | 32 kDa protein | phrog_2973 | Hoc-like head decoration | head and packaging | 1 | 6759 | 7598 |
| YP_950550.1 | NC_008720_p72 | hypothetical protein | phrog_19797 | unknown function | unknown function | 1 | 69948 | 70076 |
| YP_950482.1 | NC_008720_p4 | hypothetical protein | phrog_2164 | unknown function | unknown function | 1 | 1532 | 1969 |
| YP_950517.1 | NC_008720_p39 | DNAP | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 22821 | 25400 |
| YP_950518.1 | NC_008720_p40 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 25397 | 25735 |
| YP_950545.1 | NC_008720_p67 | 30 kDa protein | phrog_2125 | virion structural protein | head and packaging | -1 | 65900 | 66610 |
| YP_950541.1 | NC_008720_p63 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 58321 | 58653 |
| YP_950529.1 | NC_008720_p51 | 66 kDa protein | phrog_6126 | virion structural protein | head and packaging | -1 | 45126 | 47060 |
| YP_950479.1 | NC_008720_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 154 | 480 |
| YP_950499.1 | NC_008720_p21 | hypothetical protein | phrog_7431 | unknown function | unknown function | 1 | 9155 | 9379 |
| YP_950547.1 | NC_008720_p69 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 68202 | 68894 |
| YP_950538.1 | NC_008720_p60 | hypothetical protein | phrog_6197 | Rz-like spanin | lysis | -1 | 56976 | 57479 |
| YP_950504.1 | NC_008720_p26 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 12313 | 12819 |
| YP_950493.1 | NC_008720_p15 | RNAP1 | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4603 | 5412 |
| YP_950533.1 | NC_008720_p55 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 51177 | 51803 |
| YP_950532.1 | NC_008720_p54 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 50198 | 51097 |
| YP_950531.1 | NC_008720_p53 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 47537 | 50194 |
| YP_950524.1 | NC_008720_p46 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31118 | 31675 |
| YP_950508.1 | NC_008720_p30 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 13843 | 14784 |
| YP_950519.1 | NC_008720_p41 | hypothetical protein | phrog_37456 | unknown function | unknown function | 1 | 25738 | 26346 |
| YP_950523.1 | NC_008720_p45 | single-stranded DNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30321 | 31118 |
| YP_950515.1 | NC_008720_p37 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 20957 | 22276 |
| YP_950512.1 | NC_008720_p34 | rIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 17985 | 20075 |
| YP_950494.1 | NC_008720_p16 | RNAP2 | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5460 | 6674 |
| YP_950503.1 | NC_008720_p25 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11164 | 12306 |
| YP_950540.1 | NC_008720_p62 | hypothetical protein | phrog_1356 | holin | lysis | -1 | 58073 | 58336 |
| YP_950520.1 | NC_008720_p42 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 26343 | 27317 |
| YP_950511.1 | NC_008720_p33 | rIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 15460 | 17985 |
| YP_950522.1 | NC_008720_p44 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29520 | 30275 |
| YP_950539.1 | NC_008720_p61 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 57460 | 58086 |
| YP_950496.1 | NC_008720_p18 | hypothetical protein | phrog_1510 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 7668 | 7982 |
| YP_950527.1 | NC_008720_p49 | hypothetical protein | phrog_872 | unknown function | unknown function | 1 | 34003 | 34485 |
| YP_950510.1 | NC_008720_p32 | hypothetical protein | phrog_9004 | unknown function | unknown function | 1 | 15108 | 15434 |
| YP_950505.1 | NC_008720_p27 | hypothetical protein | phrog_7594 | unknown function | unknown function | 1 | 12833 | 13033 |
| YP_950488.1 | NC_008720_p10 | hypothetical protein | phrog_35919 | unknown function | unknown function | 1 | 3106 | 3282 |
| YP_950485.1 | NC_008720_p7 | hypothetical protein | phrog_20789 | unknown function | unknown function | 1 | 2310 | 2519 |
| YP_950521.1 | NC_008720_p43 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27314 | 29461 |
| YP_950530.1 | NC_008720_p52 | 16.5 kDa protein | phrog_2646 | unknown function | unknown function | -1 | 47071 | 47523 |
| YP_950534.1 | NC_008720_p56 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 51866 | 53071 |
| YP_950498.1 | NC_008720_p20 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 8256 | 9092 |