Genomic map of Staphylococcus virus PH15 (NC_008723)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008723
Definition
Staphylococcus phage PH15, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
44041
Host Name
Staphylococcus epidermidis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
34.9
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_950724.1 NC_008723_p62 dUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 41968 42393
YP_950703.1 NC_008723_p41 hypothetical protein phrog_14955 unknown function unknown function -1 33372 33578
YP_950699.1 NC_008723_p37 hypothetical protein phrog_6431 unknown function unknown function 1 32111 32272
YP_950692.1 NC_008723_p30 hypothetical protein phrog_27385 unknown function unknown function 1 27582 27797
YP_950700.1 NC_008723_p38 hypothetical protein phrog_13376 unknown function unknown function -1 32233 32403
YP_950667.1 NC_008723_p5 phage head protein phrog_115 minor head protein head and packaging 1 4351 5304
YP_950691.1 NC_008723_p29 hypothetical protein phrog_4538 unknown function unknown function 1 26247 27152
YP_950722.1 NC_008723_p60 hypothetical protein phrog_5723 acetyltransferase other 1 41558 41806
YP_950726.1 NC_008723_p64 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 42780 42932
YP_950672.1 NC_008723_p10 hypothetical protein phrog_25 head closure Hc1 connector 1 7466 7795
YP_950729.1 NC_008723_p67 hypothetical protein phrog_5723 acetyltransferase other 1 43239 43460
YP_950715.1 NC_008723_p53 hypothetical protein phrog_433 unknown function unknown function 1 38728 38973
YP_950713.1 NC_008723_p51 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 37297 38532
YP_950723.1 NC_008723_p61 hypothetical protein phrog_8714 unknown function unknown function 1 41796 41975
YP_950711.1 NC_008723_p49 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 36151 36945
YP_950721.1 NC_008723_p59 hypothetical protein phrog_4380 unknown function unknown function 1 41242 41568
YP_950701.1 NC_008723_p39 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 32452 33219
YP_950673.1 NC_008723_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7788 8201
YP_950684.1 NC_008723_p22 hypothetical protein phrog_134 unknown function unknown function 1 20587 20727
YP_950716.1 NC_008723_p54 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38982 39389
YP_950720.1 NC_008723_p58 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40381 41061
YP_950674.1 NC_008723_p12 hypothetical protein phrog_176 tail terminator connector 1 8214 8651
YP_950676.1 NC_008723_p14 hypothetical protein phrog_183 tail chaperone protein tail 1 9239 9733
YP_950669.1 NC_008723_p7 phage major capsid protein phrog_544 major head protein head and packaging 1 6022 6852
YP_950706.1 NC_008723_p44 hypothetical protein phrog_7824 unknown function unknown function 1 33971 34246
YP_950678.1 NC_008723_p16 phage tape measure protein phrog_58 tail length tape measure protein tail 1 10101 13205
YP_950719.1 NC_008723_p57 hypothetical protein phrog_1689 nucleotide kinase other 1 39944 40378
YP_950665.1 NC_008723_p3 SegB homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 1671 2300
YP_950695.1 NC_008723_p33 hypothetical protein phrog_5375 unknown function unknown function -1 30394 30870
YP_950697.1 NC_008723_p35 cI-like repressor phrog_8 transcriptional regulator transcription regulation -1 31363 31686
YP_950670.1 NC_008723_p8 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 6869 7159
YP_950689.1 NC_008723_p27 phage holin phrog_263 holin lysis 1 24493 24765
YP_950677.1 NC_008723_p15 hypothetical protein phrog_1404 tail protein tail 1 9796 10098
YP_950664.1 NC_008723_p2 large terminase subunit phrog_2 terminase large subunit head and packaging 1 720 2952
YP_950683.1 NC_008723_p21 hypothetical protein phrog_1766 tail fiber protein tail 1 20226 20585
YP_950698.1 NC_008723_p36 Cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 31850 32098
YP_950707.1 NC_008723_p45 hypothetical protein phrog_946 unknown function unknown function 1 34218 34442
YP_950727.1 NC_008723_p65 regulator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 42925 43095
YP_950728.1 NC_008723_p66 hypothetical protein phrog_1367 unknown function unknown function 1 43098 43238
YP_950666.1 NC_008723_p4 phage portal protein phrog_64 portal protein head and packaging 1 2958 4394
YP_950704.1 NC_008723_p42 hypothetical protein phrog_3785 unknown function unknown function 1 33616 33738
YP_950708.1 NC_008723_p46 topoisomerase phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34435 35061
YP_950718.1 NC_008723_p56 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 39588 39947
YP_950687.1 NC_008723_p25 hypothetical protein phrog_6487 unknown function unknown function 1 23405 23914
YP_950693.1 NC_008723_p31 site-specific recombinase phrog_95 integrase integration and excision -1 28480 29856
YP_950725.1 NC_008723_p63 hypothetical protein phrog_20198 ATPase other 1 42472 42783
YP_950675.1 NC_008723_p13 hypothetical protein phrog_238 major tail protein tail 1 8638 9177
YP_950679.1 NC_008723_p17 hypothetical protein phrog_33 distal tail protein Dit tail 1 13221 14159
YP_950668.1 NC_008723_p6 phage minor capsid protein phrog_194 head scaffolding protein head and packaging 1 5408 6004
YP_950702.1 NC_008723_p40 hypothetical protein phrog_16149 unknown function unknown function 1 33222 33386
YP_950694.1 NC_008723_p32 hypothetical protein phrog_27855 unknown function unknown function -1 29910 30392
YP_950685.1 NC_008723_p23 hypothetical protein phrog_276 unknown function unknown function 1 20764 21063
YP_950709.1 NC_008723_p47 single-strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 35054 35470
YP_950680.1 NC_008723_p18 hypothetical protein phrog_663 minor head protein head and packaging 1 14173 16029
YP_950717.1 NC_008723_p55 transcriptional regulator phrog_13968 transcriptional regulator transcription regulation 1 39390 39587
YP_950682.1 NC_008723_p20 hypothetical protein phrog_257 minor tail protein tail 1 18710 20242
YP_950690.1 NC_008723_p28 phage amidase phrog_489 endolysin lysis 1 24765 26147
YP_950710.1 NC_008723_p48 hypothetical protein phrog_398 unknown function unknown function 1 35484 36158
YP_950688.1 NC_008723_p26 hypothetical protein phrog_2981 unknown function unknown function 1 23914 24444
YP_950714.1 NC_008723_p52 hypothetical protein phrog_3161 unknown function unknown function 1 38529 38750
YP_950686.1 NC_008723_p24 hydrolase phrog_759 tail associated cell-wall hydrolase other 1 21202 23349
YP_950671.1 NC_008723_p9 head morphogenesis protein phrog_1161 head-tail adaptor connector 1 7159 7473
YP_950696.1 NC_008723_p34 hypothetical protein phrog_87 metallo-protease other -1 30890 31351
YP_950712.1 NC_008723_p50 hypothetical protein phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 36945 37304
YP_950730.1 NC_008723_p68 regulator RinA phrog_36 transcriptional regulator transcription regulation 1 43478 43894
YP_950681.1 NC_008723_p19 phage pre-neck appendage protein phrog_4775 pre-neck appendage protein connector 1 16044 18710
YP_950857.1 NC_008723_p1 small terminase subunit phrog_51 terminase small subunit head and packaging 1 299 733
YP_950705.1 NC_008723_p43 hypothetical protein phrog_5815 unknown function unknown function 1 33735 33911