Genomic map of Staphylococcus virus phiETA2 (NC_008798)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008798
Definition
Staphylococcus phage phiETA2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
43265
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
34.27
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001004288.1 NC_008798_p28 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 12358 12729
YP_001004278.1 NC_008798_p18 hypothetical protein phrog_20102 unknown function unknown function 1 8426 8629
YP_001004293.1 NC_008798_p33 hypothetical protein phrog_266 unknown function unknown function 1 13738 13992
YP_001004299.1 NC_008798_p39 hypothetical protein phrog_1367 unknown function unknown function 1 15442 15588
YP_001004284.1 NC_008798_p24 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 11360 11518
YP_001004263.1 NC_008798_p3 hypothetical protein phrog_13276 unknown function unknown function -1 1352 2257
YP_001004292.1 NC_008798_p32 hypothetical protein phrog_1034 unknown function unknown function 1 13455 13745
YP_001004283.1 NC_008798_p23 replicative DNA helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 10587 11366
YP_001004321.1 NC_008798_p61 hypothetical protein phrog_300 tail fiber protein tail 1 35627 36004
YP_001004265.1 NC_008798_p5 ribosomal protein phrog_1914 unknown function unknown function -1 3042 3716
YP_001004327.1 NC_008798_p67 holin protein phrog_263 holin lysis 1 40263 40538
YP_001004269.1 NC_008798_p9 hypothetical protein phrog_1796 unknown function unknown function 1 5290 5514
YP_001004261.1 NC_008798_p1 integrase phrog_1 integrase integration and excision -1 53 1102
YP_001004305.1 NC_008798_p45 hypothetical protein phrog_1431 unknown function unknown function 1 20546 20716
YP_001004300.1 NC_008798_p40 transcriptional activator RinA phrog_36 transcriptional regulator transcription regulation 1 15612 16034
YP_001004279.1 NC_008798_p19 hypothetical protein phrog_398 unknown function unknown function 1 8650 9321
YP_001004275.1 NC_008798_p15 hypothetical protein phrog_946 unknown function unknown function 1 7062 7283
YP_001004295.1 NC_008798_p35 hypothetical protein phrog_3521 unknown function unknown function 1 14712 14885
YP_001004304.1 NC_008798_p44 minor head protein phrog_115 minor head protein head and packaging 1 19479 20459
YP_001004282.1 NC_008798_p22 Rep protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 9717 10577
YP_001004326.1 NC_008798_p66 hypothetical protein phrog_1262 unknown function unknown function 1 39812 40207
YP_001004319.1 NC_008798_p59 lytic system phrog_287 minor tail protein tail 1 31894 33804
YP_001004313.1 NC_008798_p53 hypothetical protein phrog_238 major tail protein tail 1 24143 24724
YP_001004307.1 NC_008798_p47 head protein phrog_10 major head protein head and packaging 1 21459 22433
YP_001004276.1 NC_008798_p16 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7276 8055
YP_001004298.1 NC_008798_p38 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 15253 15441
YP_001004264.1 NC_008798_p4 hypothetical protein phrog_888 unknown function unknown function -1 2289 3020
YP_001004308.1 NC_008798_p48 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 22455 22742
YP_001004323.1 NC_008798_p63 hypothetical protein phrog_276 unknown function unknown function 1 36221 36520
YP_001004297.1 NC_008798_p37 hypothetical protein phrog_3885 unknown function unknown function 1 15059 15265
YP_001004267.1 NC_008798_p7 Cro protein phrog_3 transcriptional repressor transcription regulation 1 4328 4522
YP_001004277.1 NC_008798_p17 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 8086 8637
YP_001004314.1 NC_008798_p54 hypothetical protein phrog_183 tail chaperone protein tail 1 24786 25151
YP_001004268.1 NC_008798_p8 anti-repressor protein phrog_130 anti-repressor Ant transcription regulation 1 4522 5289
YP_001004309.1 NC_008798_p49 hypothetical protein phrog_132 head-tail adaptor connector 1 22751 23083
YP_001004311.1 NC_008798_p51 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23382 23729
YP_001004328.1 NC_008798_p68 amidase phrog_489 endolysin lysis 1 40525 41937
YP_001004271.1 NC_008798_p11 hypothetical protein phrog_989 unknown function unknown function 1 6017 6238
YP_001004310.1 NC_008798_p50 hypothetical protein phrog_348 minor head protein head and packaging 1 23080 23382
YP_001004289.1 NC_008798_p29 hypothetical protein phrog_236 nucleotide kinase other 1 12729 12986
YP_001004273.1 NC_008798_p13 hypothetical protein phrog_983 unknown function unknown function 1 6485 6787
YP_001004291.1 NC_008798_p31 hypothetical protein phrog_258 virulence associated other 1 13204 13446
YP_001004294.1 NC_008798_p34 dUTP nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 14142 14675
YP_001004286.1 NC_008798_p26 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11763 12167
YP_001004290.1 NC_008798_p30 hypothetical protein phrog_987 unknown function unknown function 1 12989 13189
YP_001004285.1 NC_008798_p25 hypothetical protein phrog_433 unknown function unknown function 1 11531 11752
YP_001004318.1 NC_008798_p58 hypothetical protein phrog_663 minor head protein head and packaging 1 29978 31879
YP_001004272.1 NC_008798_p12 hypothetical protein phrog_369 unknown function unknown function 1 6231 6392
YP_001004322.1 NC_008798_p62 hypothetical protein phrog_134 unknown function unknown function 1 36008 36181
YP_001004281.1 NC_008798_p21 hypothetical protein phrog_1090 unknown function unknown function -1 9460 9741
YP_001004280.1 NC_008798_p20 hypothetical protein phrog_1902 unknown function unknown function 1 9318 9467
YP_001004306.1 NC_008798_p46 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 20825 21445
YP_001004302.1 NC_008798_p42 large terminase phrog_2 terminase large subunit head and packaging 1 16649 17926
YP_001004296.1 NC_008798_p36 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 14902 15090
YP_001004317.1 NC_008798_p57 hypothetical protein phrog_33 distal tail protein Dit tail 1 29022 29969
YP_001004274.1 NC_008798_p14 hypothetical protein phrog_401 unknown function unknown function 1 6792 7052
YP_001004266.1 NC_008798_p6 repressor phrog_8 transcriptional regulator transcription regulation -1 3733 4065
YP_001004324.1 NC_008798_p64 cell wall hydrolase phrog_759 tail associated cell-wall hydrolase other 1 36657 38555
YP_001004315.1 NC_008798_p55 hypothetical protein phrog_441 tail assembly chaperone tail 1 25181 25525
YP_001004320.1 NC_008798_p60 hypothetical protein phrog_257 minor tail protein tail 1 33804 35627
YP_001004287.1 NC_008798_p27 hypothetical protein phrog_299 unknown function unknown function 1 12172 12357
YP_001004301.1 NC_008798_p41 small terminase phrog_51 terminase small subunit head and packaging 1 16147 16662
YP_001004325.1 NC_008798_p65 tail fiber protein phrog_1125 tail fiber protein tail 1 38568 39806
YP_001004329.1 NC_008798_p69 exfoliative toxin A phrog_13651 unknown function unknown function 1 42063 42905
YP_001004262.1 NC_008798_p2 excisionase phrog_16497 excisionase integration and excision 1 1215 1415
YP_001004312.1 NC_008798_p52 hypothetical protein phrog_176 tail terminator connector 1 23741 24124
YP_001004316.1 NC_008798_p56 tail protein phrog_58 tail length tape measure protein tail 1 25542 29009
YP_001004270.1 NC_008798_p10 hypothetical protein phrog_2305 unknown function unknown function 1 5554 6003
YP_001004303.1 NC_008798_p43 portal protein phrog_64 portal protein head and packaging 1 17937 19472