Genomic map of Staphylococcus virus phiETA3 (NC_008799)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008799
Definition
Staphylococcus phage phiETA3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
43282
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
34.89
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001004373.1 NC_008799_p44 hypothetical protein phrog_2881 dCMP hydroxymethylase DNA, RNA and nucleotide metabolism 1 21212 21418
YP_001004389.1 NC_008799_p60 hypothetical protein phrog_300 tail fiber protein tail 1 35668 36045
YP_001004380.1 NC_008799_p51 tail protein phrog_176 tail terminator connector 1 24307 24732
YP_001004332.1 NC_008799_p3 hypothetical protein phrog_13276 unknown function unknown function -1 1351 2256
YP_001004364.1 NC_008799_p35 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 15295 15489
YP_001004371.1 NC_008799_p42 portal protein phrog_64 portal protein head and packaging 1 18864 20288
YP_001004363.1 NC_008799_p34 hypothetical protein phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 14722 15258
YP_001004350.1 NC_008799_p21 Rep protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 9774 10634
YP_001004378.1 NC_008799_p49 hypothetical protein phrog_25 head closure Hc1 connector 1 23559 23894
YP_001004384.1 NC_008799_p55 hypothetical protein phrog_58 tail length tape measure protein tail 1 26196 29081
YP_001004387.1 NC_008799_p58 hypothetical protein phrog_287 minor tail protein tail 1 31947 33845
YP_001004372.1 NC_008799_p43 minor head protein phrog_115 minor head protein head and packaging 1 20257 21210
YP_001004341.1 NC_008799_p12 hypothetical protein phrog_369 unknown function unknown function 1 6230 6391
YP_001004396.1 NC_008799_p67 amidase phrog_489 endolysin lysis 1 40542 41954
YP_001004362.1 NC_008799_p33 hypothetical protein singleton unknown function unknown function 1 14460 14729
YP_001004375.1 NC_008799_p46 major capsid protein phrog_10 major head protein head and packaging 1 22122 23036
YP_001004338.1 NC_008799_p9 hypothetical protein phrog_1796 unknown function unknown function 1 5289 5513
YP_001004366.1 NC_008799_p37 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 16060 16233
YP_001004353.1 NC_008799_p24 hypothetical protein phrog_433 unknown function unknown function 1 11588 11809
YP_001004334.1 NC_008799_p5 hypothetical protein phrog_1914 unknown function unknown function -1 3041 3715
YP_001004381.1 NC_008799_p52 major tail protein phrog_238 major tail protein tail 1 24733 25290
YP_001004351.1 NC_008799_p22 replicative DNA helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 10644 11423
YP_001004357.1 NC_008799_p28 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 12847 13203
YP_001004382.1 NC_008799_p53 hypothetical protein phrog_183 tail chaperone protein tail 1 25357 25863
YP_001004386.1 NC_008799_p57 hypothetical protein phrog_663 minor head protein head and packaging 1 30048 31934
YP_001004365.1 NC_008799_p36 hypothetical protein phrog_20169 membrane protein moron, auxiliary metabolic gene and host takeover 1 15489 16013
YP_001004367.1 NC_008799_p38 hypothetical protein phrog_1367 unknown function unknown function 1 16234 16380
YP_001004355.1 NC_008799_p26 hypothetical protein phrog_299 unknown function unknown function 1 12228 12413
YP_001004335.1 NC_008799_p6 repressor phrog_8 transcriptional regulator transcription regulation -1 3732 4064
YP_001004346.1 NC_008799_p17 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 8249 8692
YP_001004388.1 NC_008799_p59 hypothetical protein phrog_257 minor tail protein tail 1 33845 35668
YP_001004352.1 NC_008799_p23 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 11417 11575
YP_001004383.1 NC_008799_p54 hypothetical protein phrog_12040 unknown function unknown function 1 26043 26192
YP_001004385.1 NC_008799_p56 hypothetical protein phrog_33 distal tail protein Dit tail 1 29096 30037
YP_001004369.1 NC_008799_p40 hypothetical protein phrog_1595 terminase small subunit head and packaging 1 17157 17651
YP_001004393.1 NC_008799_p64 tail fiber protein phrog_1125 tail fiber protein tail 1 38585 39823
YP_001004391.1 NC_008799_p62 hypothetical protein phrog_276 unknown function unknown function 1 36262 36561
YP_001004361.1 NC_008799_p32 hypothetical protein phrog_266 unknown function unknown function 1 14309 14572
YP_001004331.1 NC_008799_p2 excisionase phrog_16497 excisionase integration and excision 1 1214 1414
YP_001004390.1 NC_008799_p61 hypothetical protein phrog_134 unknown function unknown function 1 36049 36222
YP_001004344.1 NC_008799_p15 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7065 7601
YP_001004358.1 NC_008799_p29 hypothetical protein phrog_258 virulence associated other 1 13207 13449
YP_001004336.1 NC_008799_p7 Cro protein phrog_3 transcriptional repressor transcription regulation 1 4327 4521
YP_001004356.1 NC_008799_p27 hypothetical protein phrog_1709 unknown function unknown function 1 12414 12719
YP_001004343.1 NC_008799_p14 hypothetical protein phrog_401 unknown function unknown function 1 6792 7052
YP_001004347.1 NC_008799_p18 hypothetical protein phrog_398 unknown function unknown function 1 8704 9378
YP_001004349.1 NC_008799_p20 hypothetical protein phrog_1090 unknown function unknown function -1 9517 9798
YP_001004360.1 NC_008799_p31 hypothetical protein phrog_742 acetyltransferase other 1 13960 14325
YP_001004340.1 NC_008799_p11 hypothetical protein phrog_989 unknown function unknown function 1 6016 6237
YP_001004395.1 NC_008799_p66 holin protein phrog_263 holin lysis 1 40280 40555
YP_001004397.1 NC_008799_p68 exfoliative toxin A phrog_13651 unknown function unknown function 1 42080 42922
YP_001004379.1 NC_008799_p50 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23845 24294
YP_001004376.1 NC_008799_p47 hypothetical protein phrog_2406 unknown function unknown function 1 23045 23191
YP_001004342.1 NC_008799_p13 hypothetical protein phrog_983 unknown function unknown function 1 6485 6787
YP_001004348.1 NC_008799_p19 hypothetical protein phrog_1902 unknown function unknown function 1 9375 9524
YP_001004345.1 NC_008799_p16 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7602 8252
YP_001004333.1 NC_008799_p4 hypothetical protein phrog_888 unknown function unknown function -1 2288 3013
YP_001004337.1 NC_008799_p8 anti-repressor protein phrog_130 anti-repressor Ant transcription regulation 1 4521 5288
YP_001004394.1 NC_008799_p65 hypothetical protein phrog_1262 unknown function unknown function 1 39829 40224
YP_001004359.1 NC_008799_p30 hypothetical protein phrog_98 unknown function unknown function 1 13514 13963
YP_001004374.1 NC_008799_p45 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 21521 22105
YP_001004368.1 NC_008799_p39 transcriptional activator RinA phrog_36 transcriptional regulator transcription regulation 1 16404 16826
YP_001004370.1 NC_008799_p41 large terminase phrog_2 terminase large subunit head and packaging 1 17644 18867
YP_001004339.1 NC_008799_p10 hypothetical protein phrog_2305 unknown function unknown function 1 5553 6002
YP_001004392.1 NC_008799_p63 cell wall hydrolase phrog_759 tail associated cell-wall hydrolase other 1 36698 38572
YP_001004377.1 NC_008799_p48 head completion protein phrog_1161 head-tail adaptor connector 1 23197 23547
YP_001004354.1 NC_008799_p25 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11819 12223
YP_001004330.1 NC_008799_p1 integrase phrog_1 integrase integration and excision -1 53 1102