| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009018 |
Definition |
Streptococcus phage phi3396, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
38528 |
Host Name |
Streptococcus dysgalactiae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
37.48 |
Number of singletons |
6 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001039948.1 | NC_009018_p61 | hypothetical protein | phrog_1529 | unknown function | unknown function | -1 | 37132 | 37317 |
| YP_001039945.1 | NC_009018_p58 | hypothetical protein | phrog_3399 | unknown function | unknown function | -1 | 36135 | 36290 |
| YP_001039926.1 | NC_009018_p39 | hypothetical protein | phrog_25 | head closure Hc1 | connector | 1 | 20101 | 20463 |
| YP_001039951.1 | NC_009018_p64 | paratox | phrog_2133 | unknown function | unknown function | 1 | 38259 | 38441 |
| YP_001039950.1 | NC_009018_p63 | hypothetical protein | phrog_26647 | unknown function | unknown function | -1 | 37827 | 38135 |
| YP_001039894.1 | NC_009018_p7 | hypothetical protein | phrog_8322 | unknown function | unknown function | 1 | 3780 | 3914 |
| YP_001039913.1 | NC_009018_p26 | phage transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 11490 | 11909 |
| YP_001039927.1 | NC_009018_p40 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20447 | 20863 |
| YP_001039943.1 | NC_009018_p56 | phage-associated cell wall hydrolase | phrog_1309 | endolysin | lysis | 1 | 34816 | 35592 |
| YP_001039895.1 | NC_009018_p8 | antirepressor | phrog_463 | anti-repressor | transcription regulation | 1 | 3911 | 4666 |
| YP_001039930.1 | NC_009018_p43 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 21916 | 22218 |
| YP_001039908.1 | NC_009018_p21 | hypothetical protein | phrog_11721 | unknown function | unknown function | 1 | 9203 | 9430 |
| YP_001039929.1 | NC_009018_p42 | major tail protein | phrog_88 | major tail protein | tail | 1 | 21233 | 21823 |
| YP_001039892.1 | NC_009018_p5 | hypothetical protein | phrog_6383 | unknown function | unknown function | 1 | 3369 | 3533 |
| YP_001039910.1 | NC_009018_p23 | hypothetical protein | phrog_12294 | unknown function | unknown function | 1 | 10050 | 10328 |
| YP_001039914.1 | NC_009018_p27 | probable site-specific tyrosine recombinase xerc_like | phrog_216 | integrase | integration and excision | 1 | 12069 | 12644 |
| YP_001039933.1 | NC_009018_p46 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 26547 | 27320 |
| YP_001039903.1 | NC_009018_p16 | hypothetical protein | phrog_12294 | unknown function | unknown function | 1 | 7386 | 7664 |
| YP_001039888.1 | NC_009018_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 106 | 1302 |
| YP_001039917.1 | NC_009018_p30 | endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13584 | 13895 |
| YP_001039897.1 | NC_009018_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4885 | 5001 |
| YP_001039936.1 | NC_009018_p49 | hypothetical protein | phrog_5239 | unknown function | unknown function | 1 | 30426 | 31058 |
| YP_001039907.1 | NC_009018_p20 | N-6 adenine-specific DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 8516 | 9190 |
| YP_001039904.1 | NC_009018_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7679 | 7795 |
| YP_001039925.1 | NC_009018_p38 | hypothetical protein | phrog_749 | unknown function | unknown function | 1 | 19800 | 20108 |
| YP_001039896.1 | NC_009018_p9 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4680 | 4997 |
| YP_001039934.1 | NC_009018_p47 | phage endopeptidase | phrog_3095 | tail protein with endopeptidase activity | other | 1 | 27317 | 29374 |
| YP_001039911.1 | NC_009018_p24 | immunity repressor protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 10325 | 10663 |
| YP_001039932.1 | NC_009018_p45 | phage-related tail tape measure protein | phrog_1293 | tail length tape measure protein | tail | 1 | 22410 | 26537 |
| YP_001039921.1 | NC_009018_p34 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 16489 | 17676 |
| YP_001039919.1 | NC_009018_p32 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 14368 | 16098 |
| YP_001039947.1 | NC_009018_p60 | hypothetical protein | phrog_34334 | unknown function | unknown function | -1 | 36826 | 37116 |
| YP_001039949.1 | NC_009018_p62 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 37314 | 37805 |
| YP_001039909.1 | NC_009018_p22 | hypothetical protein | phrog_23238 | unknown function | unknown function | 1 | 9432 | 10031 |
| YP_001039944.1 | NC_009018_p57 | hypothetical protein | phrog_18728 | unknown function | unknown function | -1 | 35743 | 36024 |
| YP_001039939.1 | NC_009018_p52 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 33125 | 33550 |
| YP_001039937.1 | NC_009018_p50 | phage infection protein | phrog_1899 | unknown function | unknown function | 1 | 31069 | 33111 |
| YP_001039923.1 | NC_009018_p36 | major coat protein | phrog_10 | major head protein | head and packaging | 1 | 18480 | 19613 |
| YP_001039906.1 | NC_009018_p19 | hypothetical protein | phrog_1027 | unknown function | unknown function | 1 | 8235 | 8519 |
| YP_001039905.1 | NC_009018_p18 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 7864 | 8238 |
| YP_001039928.1 | NC_009018_p41 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 20856 | 21236 |
| YP_001039900.1 | NC_009018_p13 | replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5959 | 6873 |
| YP_001039912.1 | NC_009018_p25 | prohibitin | phrog_200 | lipoprotein | other | 1 | 10651 | 11493 |
| YP_001039891.1 | NC_009018_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2725 | 3147 |
| YP_001039901.1 | NC_009018_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6860 | 7051 |
| YP_001039920.1 | NC_009018_p33 | hypothetical protein | phrog_13414 | unknown function | unknown function | 1 | 16089 | 16313 |
| YP_001039902.1 | NC_009018_p15 | single-strand binding protein 1 | singleton | unknown function | unknown function | 1 | 7132 | 7371 |
| YP_001039941.1 | NC_009018_p54 | hypothetical protein | phrog_1009 | unknown function | unknown function | 1 | 34184 | 34504 |
| YP_001039899.1 | NC_009018_p12 | hypothetical protein | phrog_5051 | unknown function | unknown function | 1 | 5336 | 5920 |
| YP_001039889.1 | NC_009018_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1613 | 2353 |
| YP_001039938.1 | NC_009018_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33070 | 33543 |
| YP_001039916.1 | NC_009018_p29 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 13160 | 13597 |
| YP_001039924.1 | NC_009018_p37 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 19627 | 19800 |
| YP_001039942.1 | NC_009018_p55 | N-acetylmuramoyl-L-alanine amidase | phrog_608 | holin | lysis | 1 | 34506 | 34838 |
| YP_001039915.1 | NC_009018_p28 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 12799 | 12969 |
| YP_001039946.1 | NC_009018_p59 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 36383 | 36643 |
| YP_001039935.1 | NC_009018_p48 | phage hyaluronoglucosaminidase | phrog_6049 | tail fiber protein | tail | 1 | 29371 | 30426 |
| YP_001039931.1 | NC_009018_p44 | hypothetical protein | phrog_10068 | unknown function | unknown function | 1 | 22284 | 22400 |
| YP_001039890.1 | NC_009018_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2364 | 2759 |
| YP_001039898.1 | NC_009018_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4976 | 5116 |
| YP_001039918.1 | NC_009018_p31 | terminase small subunit | phrog_2343 | terminase small subunit | head and packaging | 1 | 14038 | 14355 |
| YP_001039940.1 | NC_009018_p53 | hypothetical protein | phrog_1554 | unknown function | unknown function | 1 | 33556 | 34173 |
| YP_001039922.1 | NC_009018_p35 | head maturation protease | phrog_94 | head maturation protease | head and packaging | 1 | 17657 | 18463 |
| YP_001039893.1 | NC_009018_p6 | hypothetical protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3575 | 3778 |