Genomic map of Streptococcus phage phi3396 (NC_009018)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009018
Definition
Streptococcus phage phi3396, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38528
Host Name
Streptococcus dysgalactiae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
37.48
Number of singletons
6
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001039948.1 NC_009018_p61 hypothetical protein phrog_1529 unknown function unknown function -1 37132 37317
YP_001039945.1 NC_009018_p58 hypothetical protein phrog_3399 unknown function unknown function -1 36135 36290
YP_001039926.1 NC_009018_p39 hypothetical protein phrog_25 head closure Hc1 connector 1 20101 20463
YP_001039951.1 NC_009018_p64 paratox phrog_2133 unknown function unknown function 1 38259 38441
YP_001039950.1 NC_009018_p63 hypothetical protein phrog_26647 unknown function unknown function -1 37827 38135
YP_001039894.1 NC_009018_p7 hypothetical protein phrog_8322 unknown function unknown function 1 3780 3914
YP_001039913.1 NC_009018_p26 phage transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 11490 11909
YP_001039927.1 NC_009018_p40 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20447 20863
YP_001039943.1 NC_009018_p56 phage-associated cell wall hydrolase phrog_1309 endolysin lysis 1 34816 35592
YP_001039895.1 NC_009018_p8 antirepressor phrog_463 anti-repressor transcription regulation 1 3911 4666
YP_001039930.1 NC_009018_p43 hypothetical protein phrog_187 head-tail adaptor connector 1 21916 22218
YP_001039908.1 NC_009018_p21 hypothetical protein phrog_11721 unknown function unknown function 1 9203 9430
YP_001039929.1 NC_009018_p42 major tail protein phrog_88 major tail protein tail 1 21233 21823
YP_001039892.1 NC_009018_p5 hypothetical protein phrog_6383 unknown function unknown function 1 3369 3533
YP_001039910.1 NC_009018_p23 hypothetical protein phrog_12294 unknown function unknown function 1 10050 10328
YP_001039914.1 NC_009018_p27 probable site-specific tyrosine recombinase xerc_like phrog_216 integrase integration and excision 1 12069 12644
YP_001039933.1 NC_009018_p46 hypothetical protein phrog_33 distal tail protein Dit tail 1 26547 27320
YP_001039903.1 NC_009018_p16 hypothetical protein phrog_12294 unknown function unknown function 1 7386 7664
YP_001039888.1 NC_009018_p1 integrase phrog_1 integrase integration and excision -1 106 1302
YP_001039917.1 NC_009018_p30 endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13584 13895
YP_001039897.1 NC_009018_p10 hypothetical protein singleton unknown function unknown function 1 4885 5001
YP_001039936.1 NC_009018_p49 hypothetical protein phrog_5239 unknown function unknown function 1 30426 31058
YP_001039907.1 NC_009018_p20 N-6 adenine-specific DNA methylase phrog_67 DNA methyltransferase other 1 8516 9190
YP_001039904.1 NC_009018_p17 hypothetical protein singleton unknown function unknown function 1 7679 7795
YP_001039925.1 NC_009018_p38 hypothetical protein phrog_749 unknown function unknown function 1 19800 20108
YP_001039896.1 NC_009018_p9 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 4680 4997
YP_001039934.1 NC_009018_p47 phage endopeptidase phrog_3095 tail protein with endopeptidase activity other 1 27317 29374
YP_001039911.1 NC_009018_p24 immunity repressor protein phrog_8 transcriptional regulator transcription regulation 1 10325 10663
YP_001039932.1 NC_009018_p45 phage-related tail tape measure protein phrog_1293 tail length tape measure protein tail 1 22410 26537
YP_001039921.1 NC_009018_p34 portal protein phrog_12 portal protein head and packaging 1 16489 17676
YP_001039919.1 NC_009018_p32 terminase large subunit phrog_9 terminase large subunit head and packaging 1 14368 16098
YP_001039947.1 NC_009018_p60 hypothetical protein phrog_34334 unknown function unknown function -1 36826 37116
YP_001039949.1 NC_009018_p62 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 37314 37805
YP_001039909.1 NC_009018_p22 hypothetical protein phrog_23238 unknown function unknown function 1 9432 10031
YP_001039944.1 NC_009018_p57 hypothetical protein phrog_18728 unknown function unknown function -1 35743 36024
YP_001039939.1 NC_009018_p52 hypothetical protein phrog_1401 unknown function unknown function 1 33125 33550
YP_001039937.1 NC_009018_p50 phage infection protein phrog_1899 unknown function unknown function 1 31069 33111
YP_001039923.1 NC_009018_p36 major coat protein phrog_10 major head protein head and packaging 1 18480 19613
YP_001039906.1 NC_009018_p19 hypothetical protein phrog_1027 unknown function unknown function 1 8235 8519
YP_001039905.1 NC_009018_p18 hypothetical protein phrog_98 unknown function unknown function 1 7864 8238
YP_001039928.1 NC_009018_p41 hypothetical protein phrog_78 tail terminator connector 1 20856 21236
YP_001039900.1 NC_009018_p13 replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 5959 6873
YP_001039912.1 NC_009018_p25 prohibitin phrog_200 lipoprotein other 1 10651 11493
YP_001039891.1 NC_009018_p4 repressor phrog_8 transcriptional regulator transcription regulation -1 2725 3147
YP_001039901.1 NC_009018_p14 hypothetical protein singleton unknown function unknown function 1 6860 7051
YP_001039920.1 NC_009018_p33 hypothetical protein phrog_13414 unknown function unknown function 1 16089 16313
YP_001039902.1 NC_009018_p15 single-strand binding protein 1 singleton unknown function unknown function 1 7132 7371
YP_001039941.1 NC_009018_p54 hypothetical protein phrog_1009 unknown function unknown function 1 34184 34504
YP_001039899.1 NC_009018_p12 hypothetical protein phrog_5051 unknown function unknown function 1 5336 5920
YP_001039889.1 NC_009018_p2 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover -1 1613 2353
YP_001039938.1 NC_009018_p51 hypothetical protein singleton unknown function unknown function -1 33070 33543
YP_001039916.1 NC_009018_p29 hypothetical protein phrog_3511 unknown function unknown function 1 13160 13597
YP_001039924.1 NC_009018_p37 hypothetical protein phrog_933 unknown function unknown function 1 19627 19800
YP_001039942.1 NC_009018_p55 N-acetylmuramoyl-L-alanine amidase phrog_608 holin lysis 1 34506 34838
YP_001039915.1 NC_009018_p28 hypothetical protein phrog_4194 unknown function unknown function 1 12799 12969
YP_001039946.1 NC_009018_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 36383 36643
YP_001039935.1 NC_009018_p48 phage hyaluronoglucosaminidase phrog_6049 tail fiber protein tail 1 29371 30426
YP_001039931.1 NC_009018_p44 hypothetical protein phrog_10068 unknown function unknown function 1 22284 22400
YP_001039890.1 NC_009018_p3 hypothetical protein phrog_87 metallo-protease other -1 2364 2759
YP_001039898.1 NC_009018_p11 hypothetical protein singleton unknown function unknown function 1 4976 5116
YP_001039918.1 NC_009018_p31 terminase small subunit phrog_2343 terminase small subunit head and packaging 1 14038 14355
YP_001039940.1 NC_009018_p53 hypothetical protein phrog_1554 unknown function unknown function 1 33556 34173
YP_001039922.1 NC_009018_p35 head maturation protease phrog_94 head maturation protease head and packaging 1 17657 18463
YP_001039893.1 NC_009018_p6 hypothetical protein phrog_1468 transcriptional repressor transcription regulation 1 3575 3778