Genomic map of Burkholderia virus phiE122 (NC_009236)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009236
Definition
Burkholderia phage phiE12-2 chromosome, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Tigrvirus.
DB of origin
REFSEQ
Length
36690
Host Name
Burkholderia pseudomallei
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
64.61
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001111173.1 NC_009236_p23 gp23, hypothetical protein phrog_11952 unknown function unknown function -1 15672 16613
YP_001111180.1 NC_009236_p30 gp30, phage tail protein, P2 GpE family phrog_6416 tail protein tail -1 23273 23386
YP_001111199.1 NC_009236_p49 gp49, hypothetical protein phrog_6732 unknown function unknown function -1 35940 36191
YP_001111165.1 NC_009236_p15 gp15, hypothetical replication protein phrog_91 nicking at origin of replication DNA, RNA and nucleotide metabolism -1 10955 12748
YP_001111169.1 NC_009236_p19 gp19, hypothetical protein phrog_35591 unknown function unknown function -1 14770 14907
YP_001111195.1 NC_009236_p45 gp45, bacteriophage-acquired protein phrog_1224 endolysin head and packaging -1 34295 35107
YP_001111157.1 NC_009236_p7 gp7, addiction module killer protein phrog_3445 toxin moron, auxiliary metabolic gene and host takeover -1 5990 6511
YP_001111198.1 NC_009236_p48 gp48, phage Tail Protein X phrog_46 baseplate hub tail -1 35737 35943
YP_001111191.1 NC_009236_p41 gp41, hypothetical protein phrog_8383 unknown function unknown function -1 32216 32719
YP_001111192.1 NC_009236_p42 gp42, conserved hypothetical protein singleton unknown function unknown function 1 32861 33529
YP_001111184.1 NC_009236_p34 gp34, bacteriophage-acquired protein phrog_105 tail fiber assembly tail -1 25550 26221
YP_001111167.1 NC_009236_p17 gp17, hypothetical protein phrog_20319 unknown function unknown function -1 12954 14195
YP_001111190.1 NC_009236_p40 gp40, DNA methylase phrog_67 DNA methyltransferase other 1 31175 32050
YP_001111163.1 NC_009236_p13 gp13, phage transcriptional activator, Ogr/Delta phrog_13080 unknown function unknown function -1 10470 10676
YP_001111158.1 NC_009236_p8 gp8, bacteriophage protein phrog_6456 unknown function unknown function -1 6871 7992
YP_001111154.1 NC_009236_p4 gp4, phage terminase, ATPase subunit phrog_2 terminase large subunit head and packaging 1 2730 4535
YP_001111153.1 NC_009236_p3 gp3, phage capsid scaffolding protein (GPO) phrog_73 head scaffolding protein head and packaging -1 1813 2622
YP_001111161.1 NC_009236_p11 gp11, conserved hypothetical protein phrog_18157 transcriptional repressor transcription regulation -1 9371 9652
YP_001111197.1 NC_009236_p47 gp47, bacteriophage membrane protein phrog_198 holin lysis -1 35378 35722
YP_001111151.1 NC_009236_p1 gp1, phage small terminase subunit phrog_74 terminase small subunit head and packaging -1 80 769
YP_001111176.1 NC_009236_p26 gp26, conserved hypothetical protein phrog_3518 unknown function unknown function 1 18099 18662
YP_001111193.1 NC_009236_p43 gp43, LysC phrog_952 Rz-like spanin lysis -1 33746 34021
YP_001111152.1 NC_009236_p2 gp2, phage major capsid protein, P2 family phrog_70 major head protein head and packaging -1 766 1779
YP_001111162.1 NC_009236_p12 gp12, partition protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism -1 9727 10383
YP_001111170.1 NC_009236_p20 gp20, hypothetical protein phrog_11001 unknown function unknown function -1 14916 15131
YP_001111164.1 NC_009236_p14 gp14, hypothetical-acquired protein phrog_603 transcriptional regulator transcription regulation -1 10673 10930
YP_001111194.1 NC_009236_p44 gp44, bacteriophage protein phrog_89 Rz-like spanin lysis -1 33858 34298
YP_001111178.1 NC_009236_p28 gp28, fels-2 prophage protein phrog_76 tail protein tail -1 19867 20292
YP_001111155.1 NC_009236_p5 gp5, phage portal protein, pbsx family phrog_68 portal protein head and packaging 1 4532 5587
YP_001111181.1 NC_009236_p31 gp31, phage tail protein E phrog_103 tail protein tail -1 23395 23739
YP_001111177.1 NC_009236_p27 gp27, bacteriophage late control gene D protein phrog_52 tail protein tail -1 18767 19867
YP_001111174.1 NC_009236_p24 gp24, hypothetical protein phrog_4441 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 16835 17173
YP_001111166.1 NC_009236_p16 gp16, DNA methyltransferase phrog_23296 DNA methyltransferase other -1 12748 12954
YP_001111172.1 NC_009236_p22 gp22, hypothetical protein phrog_19335 unknown function unknown function -1 15353 15538
YP_001111171.1 NC_009236_p21 gp21, hypothetical protein phrog_10656 unknown function unknown function -1 15135 15356
YP_001111196.1 NC_009236_p46 gp46, bacteriophage membrane protein phrog_217 holin lysis -1 35104 35376
YP_001111185.1 NC_009236_p35 gp35, bacteriophage protein phrog_4849 tail protein tail -1 26238 28601
YP_001111179.1 NC_009236_p29 gp29, bacteriophage membrane protein phrog_28 tail length tape measure protein tail -1 20310 23276
YP_001111160.1 NC_009236_p10 hypothetical protein phrog_5348 unknown function unknown function -1 8735 9268
YP_001111168.1 NC_009236_p18 gp18, hypothetical protein phrog_21559 unknown function unknown function -1 14397 14609
YP_001111189.1 NC_009236_p39 gp39, phage baseplate assembly protein phrog_11 baseplate spike tail -1 30420 31172
YP_001111200.1 NC_009236_p50 gp50, phage head completion protein (GPL) phrog_71 head-tail adaptor Ad1 connector -1 36191 36670
YP_001111182.1 NC_009236_p32 gp32, phage major tail tube protein phrog_55 head closure connector -1 23797 24306
YP_001111156.1 NC_009236_p6 gp6, addiction module antidote protein phrog_4268 transcriptional repressor transcription regulation -1 5631 5987
YP_001111186.1 NC_009236_p36 gp36, phage tail protein I phrog_48 tail protein tail -1 28612 29166
YP_001111175.1 NC_009236_p25 gp25, conserved hypothetical protein phrog_10187 unknown function unknown function 1 17311 17847
YP_001111187.1 NC_009236_p37 gp37, bacteriophage baseplate assembly protein J phrog_6 baseplate wedge subunit tail -1 29159 30064
YP_001111159.1 NC_009236_p9 gp9, bacteriophage protein phrog_7616 unknown function unknown function -1 8001 8738
YP_001111188.1 NC_009236_p38 gp38, phage baseplate assembly protein phrog_43 baseplate wedge subunit tail -1 30061 30423
YP_001111183.1 NC_009236_p33 gp33, phage tail sheath protein phrog_23 tail sheath tail -1 24322 25494