Genomic map of Burkholderia phage BcepGomr (NC_009447)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009447
Definition
Burkholderia phage BcepGomr, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
52414
Host Name
Burkholderia cepacia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
56.29
Number of singletons
35
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001210274.1 NC_009447_p54 hypothetical protein singleton unknown function unknown function -1 41743 41955
YP_001210257.1 NC_009447_p37 COG0602 phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 31478 32260
YP_001210282.1 NC_009447_p62 COG4983 phrog_6012 DNA helicase DNA, RNA and nucleotide metabolism 1 44883 47261
YP_001210295.1 NC_009447_p75 Rz1 phrog_1275 Rz-like spanin lysis 1 52125 52397
YP_001210287.1 NC_009447_p67 hypothetical protein singleton unknown function unknown function 1 49395 49556
YP_001210231.1 NC_009447_p11 phi JL001 hypothetical protein gp77 phrog_179 tail terminator connector 1 7836 8288
YP_001210290.1 NC_009447_p70 hypothetical protein singleton unknown function unknown function -1 50219 50611
YP_001210293.1 NC_009447_p73 Holin phrog_1356 holin lysis 1 51619 51969
YP_001210271.1 NC_009447_p51 hypothetical protein singleton unknown function unknown function -1 40655 40915
YP_001210222.1 NC_009447_p2 hypothetical protein singleton unknown function unknown function 1 790 957
YP_001210232.1 NC_009447_p12 phi JL001 hypothetical protein gp78 phrog_290 minor tail protein tail 1 8292 9587
YP_001210291.1 NC_009447_p71 protein p5 phrog_873 endolysin head and packaging 1 50837 51328
YP_001210284.1 NC_009447_p64 similar to Enterobacteria phage P1 pmgM phrog_824 unknown function unknown function 1 47916 48383
YP_001210281.1 NC_009447_p61 hypothetical protein singleton unknown function unknown function 1 44707 44883
YP_001210234.1 NC_009447_p14 hypothetical protein phrog_3817 tail chaperonin tail 1 10119 10436
YP_001210228.1 NC_009447_p8 hypothetical protein singleton unknown function unknown function 1 6399 6929
YP_001210292.1 NC_009447_p72 Holin singleton unknown function unknown function 1 51341 51622
YP_001210230.1 NC_009447_p10 hypothetical protein phrog_161 head closure Hc1 connector 1 7471 7839
YP_001210265.1 NC_009447_p45 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 38331 38993
YP_001210240.1 NC_009447_p20 similar to phage D3 orf 22 phrog_396 minor tail protein tail 1 17434 17967
YP_001210270.1 NC_009447_p50 hypothetical protein singleton unknown function unknown function -1 40391 40633
YP_001210268.1 NC_009447_p48 hypothetical protein phrog_2480 unknown function unknown function -1 39573 40109
YP_001210279.1 NC_009447_p59 hypothetical protein singleton unknown function unknown function -1 43945 44151
YP_001210277.1 NC_009447_p57 hypothetical protein singleton unknown function unknown function -1 42784 43080
YP_001210226.1 NC_009447_p6 similar to minor capsid protein phrog_206 head scaffolding protein head and packaging 1 4479 5192
YP_001210225.1 NC_009447_p5 similar to 62 kD structural protein of Bacteriophage MB78 phrog_145 portal protein head and packaging 1 2695 4302
YP_001210223.1 NC_009447_p3 hypothetical protein phrog_2864 unknown function unknown function 1 957 1160
YP_001210249.1 NC_009447_p29 hypothetical protein singleton unknown function unknown function -1 27249 27401
YP_001210224.1 NC_009447_p4 TerL phrog_2 terminase large subunit head and packaging 1 1160 2692
YP_001210269.1 NC_009447_p49 hypothetical protein singleton unknown function unknown function -1 40201 40389
YP_001210233.1 NC_009447_p13 hypothetical protein phrog_313 Tail assembly chaperone tail 1 9664 10101
YP_001210237.1 NC_009447_p17 hypothetical protein phrog_384 virion structural protein head and packaging 1 13816 14934
YP_001210267.1 NC_009447_p47 hypothetical protein singleton unknown function unknown function -1 39343 39573
YP_001210260.1 NC_009447_p40 hypothetical protein phrog_7864 unknown function unknown function -1 33664 34359
YP_001210285.1 NC_009447_p65 hypothetical protein singleton unknown function unknown function -1 48429 49043
YP_001210244.1 NC_009447_p24 hypothetical protein singleton unknown function unknown function 1 22349 23011
YP_001210280.1 NC_009447_p60 hypothetical protein singleton unknown function unknown function -1 44224 44532
YP_001210235.1 NC_009447_p15 phi JL001 hypothetical protein gp81 phrog_169 tail completion or Neck1 protein connector 1 10433 10837
YP_001210248.1 NC_009447_p28 hypothetical protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 26273 27256
YP_001210275.1 NC_009447_p55 hypothetical protein singleton unknown function unknown function -1 41952 42326
YP_001210288.1 NC_009447_p68 hypothetical protein singleton unknown function unknown function 1 49553 49675
YP_001210245.1 NC_009447_p25 hypothetical protein phrog_229 MazG-like pyrophosphatase other -1 23056 23631
YP_001210252.1 NC_009447_p32 hypothetical protein singleton unknown function unknown function -1 28929 29204
YP_001210283.1 NC_009447_p63 hypothetical protein singleton unknown function unknown function 1 47448 47714
YP_001210247.1 NC_009447_p27 hypothetical protein singleton unknown function unknown function -1 25773 26147
YP_001210255.1 NC_009447_p35 ExsB phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 30398 31303
YP_001210236.1 NC_009447_p16 tape measure protein singleton unknown function unknown function 1 10834 13812
YP_001210276.1 NC_009447_p56 hypothetical protein singleton unknown function unknown function -1 42323 42787
YP_001210242.1 NC_009447_p22 similar to phiE125 gp21 phrog_31 central tail fiber J tail 1 18355 22065
YP_001210266.1 NC_009447_p46 hypothetical protein singleton unknown function unknown function -1 39011 39346
YP_001210262.1 NC_009447_p42 COG1061 phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 34609 36411
YP_001210258.1 NC_009447_p38 hypothetical protein phrog_18634 unknown function unknown function -1 32682 33317
YP_001210238.1 NC_009447_p18 hypothetical protein phrog_5417 unknown function unknown function 1 14943 15374
YP_001210239.1 NC_009447_p19 hypothetical protein singleton unknown function unknown function 1 15378 17387
YP_001210264.1 NC_009447_p44 hypothetical protein singleton unknown function unknown function -1 37422 38270
YP_001210221.1 NC_009447_p1 hypothetical protein phrog_5334 terminase small subunit head and packaging 1 74 793
YP_001210229.1 NC_009447_p9 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 6956 7474
YP_001210294.1 NC_009447_p74 Rz inner membrane protein singleton unknown function unknown function 1 51875 52264
YP_001210261.1 NC_009447_p41 hypothetical protein singleton unknown function unknown function -1 34374 34631
YP_001210243.1 NC_009447_p23 hypothetical protein phrog_2427 unknown function unknown function 1 22065 22349
YP_001210241.1 NC_009447_p21 tail protein with COG0791: cell wall hydrolase phrog_329 minor tail protein tail 1 17964 18404
YP_001210250.1 NC_009447_p30 hypothetical protein singleton unknown function unknown function -1 27401 28015
YP_001210256.1 NC_009447_p36 hypothetical protein singleton unknown function unknown function -1 31305 31475
YP_001210246.1 NC_009447_p26 COG0417 phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 23646 25700
YP_001210251.1 NC_009447_p31 similar to Mycobacteriophage Rosebush gp2 phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 28012 28932
YP_001210254.1 NC_009447_p34 COG0720 phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 29937 30398
YP_001210278.1 NC_009447_p58 similar to Bacteriophage B3 B3ORF5 phrog_421 unknown function unknown function -1 43142 43846
YP_001210253.1 NC_009447_p33 COG0302 phrog_2197 GTP cyclohydrolase other -1 29216 29935
YP_001210227.1 NC_009447_p7 similar to JL001p67 major capsid protein phrog_247 major head protein head and packaging 1 5222 6325
YP_001210289.1 NC_009447_p69 hypothetical protein singleton unknown function unknown function 1 49808 50020
YP_001210273.1 NC_009447_p53 hypothetical protein singleton unknown function unknown function -1 41609 41746
YP_001210272.1 NC_009447_p52 similar to Mycobacteriophage Rosebush gp45 phrog_636 unknown function unknown function -1 40857 41489
YP_001210286.1 NC_009447_p66 hypothetical protein singleton unknown function unknown function 1 49241 49387
YP_001210259.1 NC_009447_p39 hypothetical protein singleton unknown function unknown function -1 33467 33667
YP_001210263.1 NC_009447_p43 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 36415 37359