Genomic map of Propionibacterium phage PA6 (NC_009541)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009541
Definition
Propionibacterium phage PA6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29739
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
54.02
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001285607.1 NC_009541_p31 similar to Bxb1 gp50 phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20661 21332
YP_001285582.1 NC_009541_p6 similar to Che9d gp7 phrog_10 major head protein head and packaging 1 4645 5592
YP_001285623.1 NC_009541_p47 6.7 kDa hypothetical protein phrog_5628 unknown function unknown function 1 29190 29369
YP_001285579.1 NC_009541_p3 similar to TM4 gp5 phrog_104 portal protein head and packaging 1 1886 3211
YP_001285610.1 NC_009541_p34 similar to Bxb1 gp57 phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21796 22749
YP_001285612.1 NC_009541_p36 similar to Bxb1 gp43 phrog_1890 unknown function unknown function -1 23312 23722
YP_001285584.1 NC_009541_p8 13.1 kDa hypothetical protein phrog_501 head closure Hc1 connector 1 6101 6448
YP_001285602.1 NC_009541_p26 12.3 kDa hypothetical protein phrog_1340 unknown function unknown function -1 17938 18258
YP_001285615.1 NC_009541_p39 7.2 kDa hypothetical protein phrog_1937 unknown function unknown function -1 25131 25334
YP_001285611.1 NC_009541_p35 17.3 kDa hypothetical protein phrog_1288 unknown function unknown function -1 22791 23261
YP_001285590.1 NC_009541_p14 similar to TM4 gp17 phrog_58 tail length tape measure protein tail 1 8532 11297
YP_001285595.1 NC_009541_p19 similar to Homo sapiens collagen phrog_1806 collagen like minor tail tail 1 14630 15319
YP_001285578.1 NC_009541_p2 similar to TM4 gp4 phrog_9 terminase large subunit head and packaging 1 378 1889
YP_001285587.1 NC_009541_p11 similar to phiLC3 MTP phrog_117 major tail protein tail 1 7172 7813
YP_001285592.1 NC_009541_p16 similar to Bxb1 gp45 phrog_110 minor tail protein tail 1 12270 13427
YP_001285586.1 NC_009541_p10 12.9 kDa hypothetical protein phrog_1892 minor tail protein tail 1 6766 7113
YP_001285606.1 NC_009541_p30 22.5 kDa hypothetical protein phrog_1881 unknown function unknown function -1 20053 20616
YP_001285577.1 NC_009541_p1 similar to TM4 gp4 phrog_1897 terminase small subunit head and packaging 1 2 373
YP_001285613.1 NC_009541_p37 similar to Bxb1 gp62 phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23719 24666
YP_001285609.1 NC_009541_p33 similar to Bxz1 gp15 phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21530 21886
YP_001285588.1 NC_009541_p12 10.6 kDa hypothetical protein phrog_1927 tail assembly chaperone tail 1 7842 8138
YP_001285600.1 NC_009541_p24 14.7 kDa sigma factor (SigE) phrog_1729 unknown function unknown function -1 17245 17637
YP_001285581.1 NC_009541_p5 similar to TM4 gp8 phrog_1879 head scaffolding protein head and packaging 1 4084 4638
YP_001285608.1 NC_009541_p32 15.4 kDa DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21169 21570
YP_001285605.1 NC_009541_p29 15.6 kDa hypothetical protein singleton unknown function unknown function -1 19513 19953
YP_001285583.1 NC_009541_p7 similar to Che9d gp9 phrog_1290 head-tail adaptor connector 1 5638 6099
YP_001285601.1 NC_009541_p25 10.1 kDa hypothetical protein phrog_1947 unknown function unknown function -1 17641 17916
YP_001285604.1 NC_009541_p28 7.1 kDa hypothetical protein phrog_1923 unknown function unknown function -1 19312 19506
YP_001285622.1 NC_009541_p46 5.3 kDa hypothetical protein phrog_8276 unknown function unknown function 1 28878 29033
YP_001285596.1 NC_009541_p20 similar to Che8 gp32 phrog_670 endolysin lysis 1 15376 16236
YP_001285614.1 NC_009541_p38 similar to TM4 gp52 phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24666 25025
YP_001285621.1 NC_009541_p45 7.0 kDa hypothetical protein phrog_26952 unknown function unknown function -1 27430 27612
YP_001285618.1 NC_009541_p42 similar to omega gp151 phrog_7707 unknown function unknown function -1 26206 26493
YP_001285597.1 NC_009541_p21 similar to Che8 gp34 phrog_443 holin lysis 1 16249 16650
YP_001285591.1 NC_009541_p15 similar to D29 gp27 phrog_106 minor tail protein tail 1 11315 12262
YP_001285593.1 NC_009541_p17 28.9 kDa hypothetical protein phrog_1910 lectin other 1 13444 14262
YP_001285616.1 NC_009541_p40 8.4 kDa hypothetical protein phrog_1884 unknown function unknown function -1 25331 25558
YP_001285598.1 NC_009541_p22 11.3 kDa hypothetical protein singleton unknown function unknown function 1 16663 16959
YP_001285617.1 NC_009541_p41 19.1 kDa hypothetical protein phrog_1908 unknown function unknown function -1 25581 26120
YP_001285599.1 NC_009541_p23 8.6 kDa hypothetical protein phrog_22752 unknown function unknown function 1 16984 17217
YP_001285594.1 NC_009541_p18 8.8 kDa hypothetical protein phrog_1958 minor tail protein tail 1 14331 14570
YP_001285589.1 NC_009541_p13 10.6 kDa hypothetical protein phrog_3166 unknown function unknown function 1 8237 8524
YP_001285580.1 NC_009541_p4 similar to TM4 gp6 phrog_193 head maturation protease head and packaging 1 3218 3973
YP_001285619.1 NC_009541_p43 11.8 kDa hypothetical protein phrog_919 unknown function unknown function -1 26622 26933
YP_001285620.1 NC_009541_p44 9.4 kDa hypothetical protein phrog_25681 unknown function unknown function -1 27007 27273
YP_001285585.1 NC_009541_p9 10.2 kDa hypothetical protein phrog_387 neck protein connector 1 6455 6745
YP_001285624.1 NC_009541_p48 similar to TM4 gp92 phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29388 29690
YP_001285603.1 NC_009541_p27 similar to TM4 gp 36 phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18269 19315