Genomic map of Geobacillus virus E2 (NC_009552)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009552
Definition
Geobacillus virus E2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40863
Host Name
Geobacillus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
44.78
Number of singletons
19
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001285846.1 NC_009552_p45 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30228 31535
YP_001522898.1 NC_009552_p1 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4 396
YP_001285827.1 NC_009552_p22 hypothetical protein singleton unknown function unknown function 1 19577 19825
YP_001285820.1 NC_009552_p15 hypothetical protein singleton unknown function unknown function 1 8234 8461
YP_001285836.1 NC_009552_p32 hypothetical protein phrog_28386 unknown function unknown function 1 24930 25109
YP_001522903.1 NC_009552_p50 hypothetical protein phrog_11547 unknown function unknown function 1 33658 33975
YP_001285866.1 NC_009552_p69 hypothetical protein singleton unknown function unknown function -1 40217 40525
YP_001522901.1 NC_009552_p37 hypothetical protein phrog_38612 unknown function unknown function 1 26431 26649
YP_001285851.1 NC_009552_p52 hypothetical protein phrog_34931 unknown function unknown function 1 34155 34676
YP_001285840.1 NC_009552_p38 hypothetical protein phrog_4331 unknown function unknown function 1 26776 26973
YP_001285835.1 NC_009552_p30 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 24509 24703
YP_001285810.1 NC_009552_p5 Clp peptidase phrog_94 head maturation protease head and packaging 1 3948 4679
YP_001285841.1 NC_009552_p39 Siphovirus Gp157-like protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 26945 27532
YP_001285833.1 NC_009552_p28 S24-like peptidase phrog_4 transcriptional repressor transcription regulation -1 23602 24291
YP_001285856.1 NC_009552_p57 hypothetical protein phrog_33962 unknown function unknown function 1 35972 36136
YP_001285865.1 NC_009552_p67 regulatory protein phrog_2655 excisionase integration and excision 1 39510 40025
YP_001285823.1 NC_009552_p18 hypothetical protein singleton unknown function unknown function -1 12980 13114
YP_001285816.1 NC_009552_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6628 7008
YP_001285853.1 NC_009552_p54 hypothetical protein phrog_38385 unknown function unknown function 1 35024 35287
YP_001285847.1 NC_009552_p46 hypothetical protein phrog_9913 unknown function unknown function 1 31532 31741
YP_001285811.1 NC_009552_p6 major capsid protein phrog_10 major head protein head and packaging 1 4722 5837
YP_001285821.1 NC_009552_p16 tail tape measure protein phrog_1272 tail length tape measure protein tail 1 8473 12720
YP_001285842.1 NC_009552_p40 hypothetical protein phrog_10048 unknown function unknown function 1 27529 28329
YP_001285867.1 NC_009552_p70 hypothetical protein phrog_23181 ATPase other 1 40515 40664
YP_001522900.1 NC_009552_p35 hypothetical protein phrog_6048 unknown function unknown function 1 26168 26431
YP_001285838.1 NC_009552_p34 AbrB-like transcriptional regulator phrog_36746 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 25899 26171
YP_001522899.1 NC_009552_p31 hypothetical protein singleton unknown function unknown function 1 24710 24955
YP_001285852.1 NC_009552_p53 hypothetical protein singleton unknown function unknown function 1 34755 35000
YP_001285860.1 NC_009552_p61 hypothetical protein phrog_236 nucleotide kinase other 1 36989 37213
YP_001285864.1 NC_009552_p66 hypothetical protein phrog_30829 unknown function unknown function 1 39104 39526
YP_001285859.1 NC_009552_p60 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36681 36971
YP_001285807.1 NC_009552_p2 terminase small subunit phrog_83 terminase small subunit head and packaging 1 389 1003
YP_001285831.1 NC_009552_p26 hypothetical protein singleton unknown function unknown function 1 21119 21919
YP_001285843.1 NC_009552_p41 hypothetical protein singleton unknown function unknown function 1 28310 28459
YP_001285825.1 NC_009552_p20 O-antigen polymerase singleton unknown function unknown function -1 15754 17244
YP_001285830.1 NC_009552_p25 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 20320 21021
YP_001285861.1 NC_009552_p62 hypothetical protein phrog_24560 unknown function unknown function 1 37218 37646
YP_001285862.1 NC_009552_p63 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 37652 38446
YP_001285850.1 NC_009552_p49 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 33063 33548
YP_001522905.1 NC_009552_p64 RinA transcriptional activator-like protein phrog_36 transcriptional regulator transcription regulation 1 38462 38893
YP_001285837.1 NC_009552_p33 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 25078 25902
YP_001522904.1 NC_009552_p51 hypothetical protein phrog_14865 unknown function unknown function 1 33968 34123
YP_001285848.1 NC_009552_p47 DNA-directed RNA polymerase specialized sigma subunit phrog_351 RNA polymerase sigma factor transcription regulation 1 31746 32444
YP_001285868.1 NC_009552_p71 hypothetical protein singleton unknown function unknown function 1 40710 40862
YP_001285826.1 NC_009552_p21 minor structural protein phrog_5555 tail protein tail 1 17417 19573
YP_001285845.1 NC_009552_p44 replication protein phrog_6251 replisome organizer DnaA-like DNA, RNA and nucleotide metabolism 1 29380 30231
YP_001285854.1 NC_009552_p55 hypothetical protein singleton unknown function unknown function 1 35284 35514
YP_001285808.1 NC_009552_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1000 2703
YP_001285844.1 NC_009552_p43 hypothetical protein singleton unknown function unknown function 1 28641 29441
YP_001285863.1 NC_009552_p65 hypothetical protein singleton unknown function unknown function 1 38761 39048
YP_001285822.1 NC_009552_p17 hypothetical protein phrog_33 distal tail protein Dit tail 1 12717 13523
YP_001285814.1 NC_009552_p9 head-tail adaptor phrog_25 head closure Hc1 connector 1 6306 6635
YP_001285817.1 NC_009552_p12 hypothetical protein phrog_78 tail terminator connector 1 7001 7330
YP_001285849.1 NC_009552_p48 hypothetical protein phrog_22514 HNH endonuclease DNA, RNA and nucleotide metabolism 1 32441 33007
YP_001285857.1 NC_009552_p58 hypothetical protein phrog_98 unknown function unknown function 1 36146 36532
YP_001285815.1 NC_009552_p10 hypothetical protein singleton unknown function unknown function -1 6339 6854
YP_001285813.1 NC_009552_p8 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 6022 6309
YP_001285824.1 NC_009552_p19 pectin lyase singleton unknown function unknown function 1 13541 15712
YP_001285818.1 NC_009552_p13 major capsid protein phrog_88 major tail protein tail 1 7327 7914
YP_001285828.1 NC_009552_p23 hypothetical protein phrog_1193 hemolysin other 1 19848 20066
YP_001285832.1 NC_009552_p27 recombinase phrog_95 integrase integration and excision -1 22140 23531
YP_001522906.1 NC_009552_p68 hypothetical protein singleton unknown function unknown function 1 40109 40432
YP_001285812.1 NC_009552_p7 hypothetical protein phrog_2616 unknown function unknown function 1 5879 6025
YP_001285855.1 NC_009552_p56 hypothetical protein phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 35498 35962
YP_001285819.1 NC_009552_p14 hypothetical protein phrog_709 unknown function unknown function 1 7918 8262
YP_001285829.1 NC_009552_p24 hypothetical protein phrog_1129 holin lysis 1 20063 20323
YP_001285809.1 NC_009552_p4 portal protein phrog_12 portal protein head and packaging 1 2716 3951
YP_001285839.1 NC_009552_p36 hypothetical protein singleton unknown function unknown function -1 26242 26652
YP_001285858.1 NC_009552_p59 hypothetical protein singleton unknown function unknown function 1 36529 36684
YP_001285834.1 NC_009552_p29 hypothetical protein singleton unknown function unknown function 1 24360 24527
YP_001522902.1 NC_009552_p42 hypothetical protein phrog_13255 unknown function unknown function 1 28456 28668