Genomic map of Lactobacillus phage LL-H (NC_009554)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009554
Definition
Lactobacillus phage LL-H, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
34659
Host Name
Lactobacillus delbrueckii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
47.81
Number of singletons
13
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001285878.1 NC_009554_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1647 3785
YP_001285897.1 NC_009554_p22 hypothetical protein phrog_8537 unknown function unknown function 1 13923 15005
YP_001285907.1 NC_009554_p32 hypothetical protein phrog_16410 unknown function unknown function 1 23844 24173
YP_001285909.1 NC_009554_p34 hypothetical protein phrog_7634 unknown function unknown function 1 25029 25316
YP_001285924.1 NC_009554_p49 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32986 33405
YP_001285880.1 NC_009554_p5 minor structural protein gp61 phrog_533 portal protein head and packaging 1 3796 5313
YP_001285883.1 NC_009554_p8 major capsid protein gp34 phrog_422 major head protein head and packaging 1 7036 7893
YP_001285900.1 NC_009554_p25 hypothetical protein singleton unknown function unknown function -1 18578 18907
YP_001285895.1 NC_009554_p20 hypothetical protein singleton unknown function unknown function -1 13302 13751
YP_001285893.1 NC_009554_p18 hypothetical protein singleton unknown function unknown function 1 11658 12251
YP_001285886.1 NC_009554_p11 hypothetical protein phrog_556 minor head protein head and packaging 1 8872 9213
YP_001285894.1 NC_009554_p19 hypothetical protein singleton unknown function unknown function 1 12194 13249
YP_001285921.1 NC_009554_p46 hypothetical protein phrog_14354 unknown function unknown function 1 31404 31655
YP_001285926.1 NC_009554_p51 hypothetical protein phrog_11108 unknown function unknown function 1 33771 34388
YP_001285916.1 NC_009554_p41 hypothetical protein singleton unknown function unknown function 1 28575 28922
YP_001285876.1 NC_009554_p1 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 1 204
YP_001285876.1 NC_009554_p1 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 34345 34659
YP_001285923.1 NC_009554_p48 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 32325 32954
YP_001285899.1 NC_009554_p24 minor structural protein gp89 phrog_4798 tail protein tail 1 16904 19294
YP_001285891.1 NC_009554_p16 hypothetical protein singleton unknown function unknown function 1 10955 11182
YP_001285877.1 NC_009554_p2 terminase small subunit phrog_51 terminase small subunit head and packaging 1 1229 1657
YP_001285911.1 NC_009554_p36 hypothetical protein phrog_8594 unknown function unknown function 1 26820 27017
YP_001285881.1 NC_009554_p6 hypothetical protein phrog_581 minor head protein head and packaging 1 5316 6431
YP_001285918.1 NC_009554_p43 dnaA analog phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 29251 30150
YP_001285906.1 NC_009554_p31 muramidase phrog_291 endolysin lysis 1 22938 23834
YP_001285905.1 NC_009554_p30 hypothetical protein phrog_2609 holin lysis 1 22625 22948
YP_001285919.1 NC_009554_p44 dnaC analog phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 30165 30968
YP_001285892.1 NC_009554_p17 hypothetical protein singleton unknown function unknown function 1 11461 11661
YP_001285913.1 NC_009554_p38 hypothetical protein singleton unknown function unknown function 1 27607 27894
YP_001285912.1 NC_009554_p37 hypothetical protein phrog_823 unknown function unknown function 1 27030 27356
YP_001285882.1 NC_009554_p7 scaffolding protein, structural protein phrog_194 head scaffolding protein head and packaging 1 6495 7031
YP_001285917.1 NC_009554_p42 hypothetical protein phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 28947 29285
YP_001285902.1 NC_009554_p27 hypothetical protein phrog_14733 unknown function unknown function 1 21457 21753
YP_001285889.1 NC_009554_p14 hypothetical protein phrog_21296 unknown function unknown function 1 10160 10606
YP_001285887.1 NC_009554_p12 hypothetical protein phrog_913 minor head protein head and packaging 1 9275 9616
YP_001285908.1 NC_009554_p33 hypothetical protein singleton unknown function unknown function 1 24574 24783
YP_001285922.1 NC_009554_p47 single strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31754 32269
YP_001285879.1 NC_009554_p4 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2195 2701
YP_001285903.1 NC_009554_p28 hypothetical protein phrog_4325 holin lysis 1 21888 22310
YP_001285925.1 NC_009554_p50 hypothetical protein singleton unknown function unknown function -1 33226 33459
YP_001285920.1 NC_009554_p45 hypothetical protein singleton unknown function unknown function 1 30965 31210
YP_001285898.1 NC_009554_p23 minor structural protein gp75 phrog_202 distal tail protein Dit tail 1 15015 16904
YP_001285910.1 NC_009554_p35 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 25932 26807
YP_001285914.1 NC_009554_p39 hypothetical protein phrog_7634 unknown function unknown function 1 27894 28184
YP_001285885.1 NC_009554_p10 hypothetical protein phrog_793 head-tail adaptor connector 1 8516 8872
YP_001285884.1 NC_009554_p9 hypothetical protein phrog_541 head-tail adaptor connector 1 8085 8519
YP_001285896.1 NC_009554_p21 hypothetical protein singleton unknown function unknown function 1 13444 13896
YP_001285888.1 NC_009554_p13 main tail protein gp19 phrog_820 major tail protein tail 1 9621 10103
YP_001285915.1 NC_009554_p40 hypothetical protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28162 28698
YP_001285890.1 NC_009554_p15 hypothetical protein singleton unknown function unknown function 1 10581 10958
YP_001285904.1 NC_009554_p29 hypothetical protein phrog_3671 unknown function unknown function 1 22300 22638
YP_001285901.1 NC_009554_p26 minor structural protein gp58 phrog_35520 tail protein tail 1 19311 21281