| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009603 |
Definition |
Microbacterium phage Min1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Minunavirus; Microbacterium virus Min1. |
DB of origin |
REFSEQ |
Length |
46365 |
Host Name |
Microbacterium nematophilum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
68.31 |
Number of singletons |
46 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001294809.1 | NC_009603_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26077 | 26433 |
| YP_001294812.1 | NC_009603_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31666 | 32241 |
| YP_001294761.1 | NC_009603_p1 | probable phage-family integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 771 |
| YP_001294837.1 | NC_009603_p77 | hypothetical protein | phrog_7115 | unknown function | unknown function | 1 | 45944 | 46315 |
| YP_001294808.1 | NC_009603_p48 | ATP-dependent serine Clp protease | phrog_18582 | tail assembly chaperone | tail | 1 | 25712 | 26080 |
| YP_001294831.1 | NC_009603_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41305 | 42609 |
| YP_001294786.1 | NC_009603_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12874 | 13305 |
| YP_001294817.1 | NC_009603_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34560 | 35519 |
| YP_001294767.1 | NC_009603_p7 | hypothetical protein | phrog_22627 | unknown function | unknown function | 1 | 2983 | 3147 |
| YP_001294824.1 | NC_009603_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38394 | 39257 |
| YP_001294765.1 | NC_009603_p5 | hypothetical protein | phrog_22627 | unknown function | unknown function | 1 | 2230 | 2394 |
| YP_001294778.1 | NC_009603_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8767 | 8871 |
| YP_001294766.1 | NC_009603_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2449 | 2964 |
| YP_001294836.1 | NC_009603_p76 | hypothetical protein | phrog_301 | secreted protein | other | -1 | 45313 | 45786 |
| YP_001294805.1 | NC_009603_p45 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 24101 | 24379 |
| YP_001294774.1 | NC_009603_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5906 | 6460 |
| YP_001294818.1 | NC_009603_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35606 | 35899 |
| YP_001294834.1 | NC_009603_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44885 | 45145 |
| YP_001294783.1 | NC_009603_p23 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11006 | 11470 |
| YP_001294819.1 | NC_009603_p59 | hypothetical protein | phrog_12298 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 35913 | 36341 |
| YP_001294788.1 | NC_009603_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13877 | 14011 |
| YP_001294804.1 | NC_009603_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23391 | 24101 |
| YP_001294813.1 | NC_009603_p53 | probable tail fiber protein | singleton | unknown function | unknown function | 1 | 32259 | 33011 |
| YP_001294800.1 | NC_009603_p40 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 21806 | 22165 |
| YP_001294779.1 | NC_009603_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9178 | 9393 |
| YP_001294827.1 | NC_009603_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39619 | 40002 |
| YP_001294807.1 | NC_009603_p47 | hypothetical protein | phrog_10909 | major tail protein | tail | 1 | 24857 | 25630 |
| YP_001294781.1 | NC_009603_p21 | hypothetical protein | phrog_35392 | unknown function | unknown function | 1 | 10003 | 10623 |
| YP_001294776.1 | NC_009603_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7119 | 7580 |
| YP_001294780.1 | NC_009603_p20 | hypothetical protein | phrog_32908 | unknown function | unknown function | 1 | 9390 | 9608 |
| YP_001294764.1 | NC_009603_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1937 | 2098 |
| YP_001294803.1 | NC_009603_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23106 | 23372 |
| YP_001294771.1 | NC_009603_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4564 | 4818 |
| YP_001294814.1 | NC_009603_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32998 | 33150 |
| YP_001294806.1 | NC_009603_p46 | hypothetical protein | phrog_6485 | tail terminator | connector | 1 | 24376 | 24795 |
| YP_001294768.1 | NC_009603_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3210 | 3497 |
| YP_001294787.1 | NC_009603_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13574 | 13771 |
| YP_001294830.1 | NC_009603_p70 | phosphoribosyl formylglycinamidine (FGAM) synthase II | singleton | unknown function | unknown function | -1 | 40945 | 43272 |
| YP_001294825.1 | NC_009603_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39265 | 39450 |
| YP_001294832.1 | NC_009603_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43328 | 43702 |
| YP_001294810.1 | NC_009603_p50 | probable tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 26451 | 29483 |
| YP_001294773.1 | NC_009603_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5102 | 5482 |
| YP_001294794.1 | NC_009603_p34 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16506 | 16799 |
| YP_001294826.1 | NC_009603_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39564 | 40130 |
| YP_001294793.1 | NC_009603_p33 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16047 | 16238 |
| YP_001294799.1 | NC_009603_p39 | Clp protease | phrog_2976 | head maturation protease | head and packaging | 1 | 20605 | 21804 |
| YP_001294777.1 | NC_009603_p17 | probable DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 7577 | 8530 |
| YP_001294811.1 | NC_009603_p51 | hypothetical protein | phrog_1885 | minor tail protein | tail | 1 | 29802 | 31673 |
| YP_001294770.1 | NC_009603_p10 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 3743 | 4495 |
| YP_001294782.1 | NC_009603_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10747 | 10965 |
| YP_001294791.1 | NC_009603_p31 | hypothetical protein | phrog_1384 | Mom-like DNA modification protein | other | 1 | 14728 | 15201 |
| YP_001294835.1 | NC_009603_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45146 | 45316 |
| YP_001294790.1 | NC_009603_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14448 | 14741 |
| YP_001294772.1 | NC_009603_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4815 | 5102 |
| YP_001294795.1 | NC_009603_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16811 | 17047 |
| YP_001294829.1 | NC_009603_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40808 | 40948 |
| YP_001294821.1 | NC_009603_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36691 | 37029 |
| YP_001294823.1 | NC_009603_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37439 | 37999 |
| YP_001294833.1 | NC_009603_p73 | delta fatty acid desaturase | singleton | unknown function | unknown function | 1 | 43713 | 44810 |
| YP_001294784.1 | NC_009603_p24 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 11671 | 12522 |
| YP_001294820.1 | NC_009603_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36359 | 36694 |
| YP_001294785.1 | NC_009603_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12534 | 12884 |
| YP_001294797.1 | NC_009603_p37 | probable terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 17540 | 19132 |
| YP_001294796.1 | NC_009603_p36 | hypothetical protein | phrog_10639 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 17154 | 17543 |
| YP_001294822.1 | NC_009603_p62 | hypothetical protein | phrog_30277 | unknown function | unknown function | 1 | 37038 | 37367 |
| YP_001294789.1 | NC_009603_p29 | hypothetical protein | phrog_33945 | unknown function | unknown function | 1 | 14008 | 14451 |
| YP_001294763.1 | NC_009603_p3 | probable cro protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1542 | 1820 |
| YP_001294815.1 | NC_009603_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33692 | 34498 |
| YP_001294775.1 | NC_009603_p15 | hypothetical protein | phrog_38686 | unknown function | unknown function | 1 | 6457 | 7119 |
| YP_001294828.1 | NC_009603_p68 | hypothetical protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 40127 | 40462 |
| YP_001294798.1 | NC_009603_p38 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 19528 | 20595 |
| YP_001294762.1 | NC_009603_p2 | probable c1 repressor | phrog_3 | transcriptional repressor | transcription regulation | -1 | 1066 | 1413 |
| YP_001294816.1 | NC_009603_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34010 | 34948 |
| YP_001294769.1 | NC_009603_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3576 | 3737 |
| YP_001294801.1 | NC_009603_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22179 | 22784 |
| YP_001294802.1 | NC_009603_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22735 | 23106 |
| YP_001294792.1 | NC_009603_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15198 | 15587 |