Genomic map of Microbacterium phage Min1 (NC_009603)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009603
Definition
Microbacterium phage Min1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Minunavirus; Microbacterium virus Min1.
DB of origin
REFSEQ
Length
46365
Host Name
Microbacterium nematophilum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
68.31
Number of singletons
46
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001294809.1 NC_009603_p49 hypothetical protein singleton unknown function unknown function 1 26077 26433
YP_001294812.1 NC_009603_p52 hypothetical protein singleton unknown function unknown function 1 31666 32241
YP_001294761.1 NC_009603_p1 probable phage-family integrase phrog_1 integrase integration and excision -1 1 771
YP_001294837.1 NC_009603_p77 hypothetical protein phrog_7115 unknown function unknown function 1 45944 46315
YP_001294808.1 NC_009603_p48 ATP-dependent serine Clp protease phrog_18582 tail assembly chaperone tail 1 25712 26080
YP_001294831.1 NC_009603_p71 hypothetical protein singleton unknown function unknown function 1 41305 42609
YP_001294786.1 NC_009603_p26 hypothetical protein singleton unknown function unknown function 1 12874 13305
YP_001294817.1 NC_009603_p57 hypothetical protein singleton unknown function unknown function 1 34560 35519
YP_001294767.1 NC_009603_p7 hypothetical protein phrog_22627 unknown function unknown function 1 2983 3147
YP_001294824.1 NC_009603_p64 hypothetical protein singleton unknown function unknown function 1 38394 39257
YP_001294765.1 NC_009603_p5 hypothetical protein phrog_22627 unknown function unknown function 1 2230 2394
YP_001294778.1 NC_009603_p18 hypothetical protein singleton unknown function unknown function 1 8767 8871
YP_001294766.1 NC_009603_p6 hypothetical protein singleton unknown function unknown function -1 2449 2964
YP_001294836.1 NC_009603_p76 hypothetical protein phrog_301 secreted protein other -1 45313 45786
YP_001294805.1 NC_009603_p45 hypothetical protein phrog_387 neck protein connector 1 24101 24379
YP_001294774.1 NC_009603_p14 hypothetical protein singleton unknown function unknown function 1 5906 6460
YP_001294818.1 NC_009603_p58 hypothetical protein singleton unknown function unknown function 1 35606 35899
YP_001294834.1 NC_009603_p74 hypothetical protein singleton unknown function unknown function 1 44885 45145
YP_001294783.1 NC_009603_p23 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 11006 11470
YP_001294819.1 NC_009603_p59 hypothetical protein phrog_12298 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 35913 36341
YP_001294788.1 NC_009603_p28 hypothetical protein singleton unknown function unknown function 1 13877 14011
YP_001294804.1 NC_009603_p44 hypothetical protein singleton unknown function unknown function 1 23391 24101
YP_001294813.1 NC_009603_p53 probable tail fiber protein singleton unknown function unknown function 1 32259 33011
YP_001294800.1 NC_009603_p40 hypothetical protein phrog_673 head scaffolding protein head and packaging 1 21806 22165
YP_001294779.1 NC_009603_p19 hypothetical protein singleton unknown function unknown function 1 9178 9393
YP_001294827.1 NC_009603_p67 hypothetical protein singleton unknown function unknown function 1 39619 40002
YP_001294807.1 NC_009603_p47 hypothetical protein phrog_10909 major tail protein tail 1 24857 25630
YP_001294781.1 NC_009603_p21 hypothetical protein phrog_35392 unknown function unknown function 1 10003 10623
YP_001294776.1 NC_009603_p16 hypothetical protein singleton unknown function unknown function 1 7119 7580
YP_001294780.1 NC_009603_p20 hypothetical protein phrog_32908 unknown function unknown function 1 9390 9608
YP_001294764.1 NC_009603_p4 hypothetical protein singleton unknown function unknown function -1 1937 2098
YP_001294803.1 NC_009603_p43 hypothetical protein singleton unknown function unknown function 1 23106 23372
YP_001294771.1 NC_009603_p11 hypothetical protein singleton unknown function unknown function 1 4564 4818
YP_001294814.1 NC_009603_p54 hypothetical protein singleton unknown function unknown function 1 32998 33150
YP_001294806.1 NC_009603_p46 hypothetical protein phrog_6485 tail terminator connector 1 24376 24795
YP_001294768.1 NC_009603_p8 hypothetical protein singleton unknown function unknown function -1 3210 3497
YP_001294787.1 NC_009603_p27 hypothetical protein singleton unknown function unknown function 1 13574 13771
YP_001294830.1 NC_009603_p70 phosphoribosyl formylglycinamidine (FGAM) synthase II singleton unknown function unknown function -1 40945 43272
YP_001294825.1 NC_009603_p65 hypothetical protein singleton unknown function unknown function 1 39265 39450
YP_001294832.1 NC_009603_p72 hypothetical protein singleton unknown function unknown function -1 43328 43702
YP_001294810.1 NC_009603_p50 probable tape-measure protein phrog_58 tail length tape measure protein tail 1 26451 29483
YP_001294773.1 NC_009603_p13 hypothetical protein singleton unknown function unknown function 1 5102 5482
YP_001294794.1 NC_009603_p34 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16506 16799
YP_001294826.1 NC_009603_p66 hypothetical protein singleton unknown function unknown function -1 39564 40130
YP_001294793.1 NC_009603_p33 hypothetical protein singleton unknown function unknown function -1 16047 16238
YP_001294799.1 NC_009603_p39 Clp protease phrog_2976 head maturation protease head and packaging 1 20605 21804
YP_001294777.1 NC_009603_p17 probable DNA methylase phrog_116 DNA methyltransferase other 1 7577 8530
YP_001294811.1 NC_009603_p51 hypothetical protein phrog_1885 minor tail protein tail 1 29802 31673
YP_001294770.1 NC_009603_p10 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 3743 4495
YP_001294782.1 NC_009603_p22 hypothetical protein singleton unknown function unknown function 1 10747 10965
YP_001294791.1 NC_009603_p31 hypothetical protein phrog_1384 Mom-like DNA modification protein other 1 14728 15201
YP_001294835.1 NC_009603_p75 hypothetical protein singleton unknown function unknown function -1 45146 45316
YP_001294790.1 NC_009603_p30 hypothetical protein singleton unknown function unknown function 1 14448 14741
YP_001294772.1 NC_009603_p12 hypothetical protein singleton unknown function unknown function 1 4815 5102
YP_001294795.1 NC_009603_p35 hypothetical protein singleton unknown function unknown function 1 16811 17047
YP_001294829.1 NC_009603_p69 hypothetical protein singleton unknown function unknown function -1 40808 40948
YP_001294821.1 NC_009603_p61 hypothetical protein singleton unknown function unknown function 1 36691 37029
YP_001294823.1 NC_009603_p63 hypothetical protein singleton unknown function unknown function 1 37439 37999
YP_001294833.1 NC_009603_p73 delta fatty acid desaturase singleton unknown function unknown function 1 43713 44810
YP_001294784.1 NC_009603_p24 hypothetical protein phrog_1467 unknown function unknown function 1 11671 12522
YP_001294820.1 NC_009603_p60 hypothetical protein singleton unknown function unknown function 1 36359 36694
YP_001294785.1 NC_009603_p25 hypothetical protein singleton unknown function unknown function 1 12534 12884
YP_001294797.1 NC_009603_p37 probable terminase phrog_9 terminase large subunit head and packaging 1 17540 19132
YP_001294796.1 NC_009603_p36 hypothetical protein phrog_10639 DNA binding protein DNA, RNA and nucleotide metabolism 1 17154 17543
YP_001294822.1 NC_009603_p62 hypothetical protein phrog_30277 unknown function unknown function 1 37038 37367
YP_001294789.1 NC_009603_p29 hypothetical protein phrog_33945 unknown function unknown function 1 14008 14451
YP_001294763.1 NC_009603_p3 probable cro protein phrog_3 transcriptional repressor transcription regulation 1 1542 1820
YP_001294815.1 NC_009603_p55 hypothetical protein singleton unknown function unknown function -1 33692 34498
YP_001294775.1 NC_009603_p15 hypothetical protein phrog_38686 unknown function unknown function 1 6457 7119
YP_001294828.1 NC_009603_p68 hypothetical protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 40127 40462
YP_001294798.1 NC_009603_p38 hypothetical protein phrog_113 portal protein head and packaging 1 19528 20595
YP_001294762.1 NC_009603_p2 probable c1 repressor phrog_3 transcriptional repressor transcription regulation -1 1066 1413
YP_001294816.1 NC_009603_p56 hypothetical protein singleton unknown function unknown function 1 34010 34948
YP_001294769.1 NC_009603_p9 hypothetical protein singleton unknown function unknown function 1 3576 3737
YP_001294801.1 NC_009603_p41 hypothetical protein singleton unknown function unknown function 1 22179 22784
YP_001294802.1 NC_009603_p42 hypothetical protein singleton unknown function unknown function 1 22735 23106
YP_001294792.1 NC_009603_p32 hypothetical protein singleton unknown function unknown function 1 15198 15587