Genomic map of Burkholderia virus BcepNY3 (NC_009604)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009604
Definition
Burkholderia phage BcepNY3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Naesvirus.
DB of origin
REFSEQ
Length
47382
Host Name
Burkholderia cenocepacia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
63.64
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001294842.1 NC_009604_p5 BcepNY3gp05 phrog_1912 head protein head and packaging -1 2855 3313
YP_001294884.1 NC_009604_p47 BcepNY3gp46 phrog_1932 tail assembly chaperone tail -1 31094 31504
YP_001294898.1 NC_009604_p61 BcepNY3gp60 singleton unknown function unknown function 1 41022 42077
YP_001294851.1 NC_009604_p14 scaffold protein singleton unknown function unknown function -1 7797 8594
YP_001294847.1 NC_009604_p10 BcepNY3gp10 phrog_21699 unknown function unknown function -1 5626 6069
YP_001294906.1 NC_009604_p69 BcepNY3gp68 phrog_19506 tail protein tail 1 45908 46714
YP_001294844.1 NC_009604_p7 BcepNY3gp07 phrog_302 virion structural protein head and packaging -1 3774 4250
YP_001294902.1 NC_009604_p65 BcepNY3gp64 singleton unknown function unknown function 1 42721 42894
YP_001294889.1 NC_009604_p52 BcepNY3gp51 phrog_349 virion structural protein head and packaging -1 34215 34604
YP_001294857.1 NC_009604_p20 BcepNY3gp19 phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 14998 16251
YP_001294855.1 NC_009604_p18 TerL phrog_38 terminase large subunit head and packaging -1 12589 14112
YP_001294858.1 NC_009604_p21 BcepNY3gp20 phrog_16841 unknown function unknown function 1 16472 17182
YP_001294876.1 NC_009604_p39 BcepNY3gp38 phrog_196 baseplate hub tail -1 26187 27113
YP_001294852.1 NC_009604_p15 BcepNY3gp14 phrog_33834 unknown function unknown function 1 9385 9513
YP_001294885.1 NC_009604_p48 BcepNY3gp47 phrog_18181 unknown function unknown function -1 31501 32013
YP_001294879.1 NC_009604_p42 BcepNY3gp41 phrog_21177 unknown function unknown function -1 27943 28089
YP_001294846.1 NC_009604_p9 DNA methylase phrog_67 DNA methyltransferase other -1 4738 5469
YP_001294881.1 NC_009604_p44 BcepNY3gp43 phrog_29445 unknown function unknown function -1 28301 28564
YP_001294871.1 NC_009604_p34 BcepNY3gp33 phrog_21112 unknown function unknown function -1 24664 24843
YP_001294903.1 NC_009604_p66 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 42960 44930
YP_001294860.1 NC_009604_p23 BcepNY3gp22 phrog_19682 unknown function unknown function 1 17725 18030
YP_001294850.1 NC_009604_p13 prohead protease phrog_2229 head maturation protease head and packaging -1 7797 9188
YP_001294887.1 NC_009604_p50 BcepNY3gp49 phrog_20222 unknown function unknown function -1 32362 32586
YP_001294896.1 NC_009604_p59 BcepNY3gp58 phrog_21312 unknown function unknown function 1 38867 39076
YP_001294880.1 NC_009604_p43 BcepNY3gp42 phrog_21965 unknown function unknown function -1 28098 28274
YP_001294868.1 NC_009604_p31 tail fiber protein phrog_12796 tail fiber protein tail -1 21241 22659
YP_001294848.1 NC_009604_p11 major capsid protein phrog_264 major head protein head and packaging -1 6179 7189
YP_001294895.1 NC_009604_p58 BcepNY3gp57 phrog_20230 unknown function unknown function 1 38692 38847
YP_001294863.1 NC_009604_p26 BcepNY3gp25 phrog_20760 unknown function unknown function 1 18581 19096
YP_001294877.1 NC_009604_p40 hypothetical protein phrog_17384 unknown function unknown function -1 27110 27406
YP_001294892.1 NC_009604_p55 BcepNY3gp54 phrog_20496 unknown function unknown function 1 38032 38175
YP_001294899.1 NC_009604_p62 BcepNY3gp61 phrog_15216 unknown function unknown function 1 42064 42279
YP_001294897.1 NC_009604_p60 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 39197 41038
YP_001294904.1 NC_009604_p67 BcepNY3gp66 phrog_16943 unknown function unknown function 1 44974 45474
YP_001294861.1 NC_009604_p24 Rz phrog_21554 membrane protein moron, auxiliary metabolic gene and host takeover 1 18027 18356
YP_001294894.1 NC_009604_p57 BcepNY3gp56 phrog_18086 unknown function unknown function 1 38489 38695
YP_001294849.1 NC_009604_p12 minor capsid protein phrog_2122 minor head protein head and packaging -1 7248 7751
YP_001294838.1 NC_009604_p1 BcepNY3gp01 phrog_2423 unknown function unknown function -1 17 217
YP_001294853.1 NC_009604_p16 head protein phrog_324 head morphogenesis head and packaging -1 9555 10499
YP_001294893.1 NC_009604_p56 BcepNY3gp55 phrog_17526 unknown function unknown function 1 38178 38492
YP_001294841.1 NC_009604_p4 BcepNY3gp04 phrog_1876 unknown function unknown function -1 2322 2858
YP_001294873.1 NC_009604_p36 BcepNY3gp35 phrog_19712 unknown function unknown function -1 25066 25260
YP_001294840.1 NC_009604_p3 BcepNY3gp03 phrog_205 tail sheath tail -1 741 2246
YP_001294843.1 NC_009604_p6 BcepNY3gp06 phrog_222 tail completion or Neck1 protein connector -1 3310 3777
YP_001294839.1 NC_009604_p2 BcepNY3gp02 phrog_1964 virion structural protein head and packaging -1 255 689
YP_001294854.1 NC_009604_p17 NUDIX hydrolase phrog_15528 portal protein head and packaging -1 10499 12586
YP_001294883.1 NC_009604_p46 BcepNY3gp45 phrog_1830 unknown function unknown function -1 30490 31089
YP_001294856.1 NC_009604_p19 BcepNY3gp18 phrog_16968 unknown function unknown function -1 14102 14599
YP_001294890.1 NC_009604_p53 BcepNY3gp52 phrog_120 baseplate wedge subunit tail -1 34601 34981
YP_001294870.1 NC_009604_p33 BcepNY3gp32 phrog_6 baseplate wedge subunit tail -1 23344 24612
YP_001294866.1 NC_009604_p29 holin phrog_785 holin lysis -1 20713 21060
YP_001294888.1 NC_009604_p51 tail spike protein phrog_32740 tail fiber protein tail -1 32653 34218
YP_001294864.1 NC_009604_p27 endolysin phrog_1224 endolysin head and packaging 1 19098 19865
YP_001294867.1 NC_009604_p30 BcepNY3gp29 phrog_14370 unknown function unknown function -1 21057 21236
YP_001294886.1 NC_009604_p49 BcepNY3gp48 phrog_36269 unknown function unknown function -1 32167 32358
YP_001294878.1 NC_009604_p41 BcepNY3gp40 phrog_21283 unknown function unknown function -1 27406 27927
YP_001294905.1 NC_009604_p68 BcepNY3gp67 phrog_17223 unknown function unknown function 1 45560 45871
YP_001294845.1 NC_009604_p8 BcepNY3gp08 phrog_2085 unknown function unknown function -1 4263 4646
YP_001294891.1 NC_009604_p54 DNA primase phrog_16593 DNA primase DNA, RNA and nucleotide metabolism 1 35537 38011
YP_001294872.1 NC_009604_p35 BcepNY3gp34 phrog_18845 unknown function unknown function -1 24845 24994
YP_001294862.1 NC_009604_p25 Rz-1 phrog_20897 unknown function unknown function 1 18235 18555
YP_001294859.1 NC_009604_p22 Rus phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 17281 17676
YP_001294869.1 NC_009604_p32 BcepNY3gp31 phrog_587 structural protein head and packaging -1 22670 23347
YP_001294901.1 NC_009604_p64 BcepNY3gp63 phrog_1411 unknown function unknown function 1 42505 42696
YP_001294875.1 NC_009604_p38 BcepNY3gp37 phrog_21497 unknown function unknown function -1 25999 26190
YP_001294874.1 NC_009604_p37 baseplate assembly protein phrog_11 baseplate spike tail -1 25263 26006
YP_001294907.1 NC_009604_p70 BcepNY3gp69 phrog_21604 membrane protein moron, auxiliary metabolic gene and host takeover 1 46761 47102
YP_001294900.1 NC_009604_p63 helix-turn-helix protein phrog_3 transcriptional repressor transcription regulation 1 42292 42495
YP_001294882.1 NC_009604_p45 tape measure protein phrog_9570 tail length tape measure protein tail -1 28633 30486
YP_001294865.1 NC_009604_p28 BcepNY3gp27 phrog_21375 unknown function unknown function 1 19933 20502