Genomic map of Actinomyces virus Av1 (NC_009643)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009643
Definition
Actinomyces phage Av-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae.
DB of origin
REFSEQ
Length
17171
Host Name
Actinomyces naeslundii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
22
%GC
49.5
Number of singletons
14
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001333660.1 NC_009643_p7 hypothetical protein singleton unknown function unknown function 1 4303 4470
YP_001333662.1 NC_009643_p9 major head protein phrog_2006 major head protein head and packaging 1 5646 7013
YP_001333657.1 NC_009643_p4 hypothetical protein phrog_6243 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1114 1512
YP_001333674.1 NC_009643_p21 hypothetical protein singleton unknown function unknown function -1 16386 16625
YP_001333654.1 NC_009643_p1 hypothetical protein singleton unknown function unknown function 1 285 539
YP_001333667.1 NC_009643_p14 antireceptor singleton unknown function unknown function 1 12458 13759
YP_001333671.1 NC_009643_p18 endolysin phrog_21825 endolysin lysis 1 15246 16064
YP_001333673.1 NC_009643_p20 hypothetical protein singleton unknown function unknown function -1 16114 16386
YP_001333659.1 NC_009643_p6 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2591 4291
YP_001333663.1 NC_009643_p10 tail protein phrog_2248 tail protein tail 1 7076 9271
YP_001333668.1 NC_009643_p15 DNA encapsidation protein phrog_2150 terminase head and packaging 1 13759 14754
YP_001333656.1 NC_009643_p3 hypothetical protein singleton unknown function unknown function 1 758 1075
YP_001333658.1 NC_009643_p5 terminal protein singleton unknown function unknown function 1 1561 2643
YP_001333675.1 NC_009643_p22 hypothetical protein singleton unknown function unknown function -1 16780 16902
YP_001333672.1 NC_009643_p19 hypothetical protein singleton unknown function unknown function -1 15884 16117
YP_001333655.1 NC_009643_p2 hypothetical protein singleton unknown function unknown function 1 543 800
YP_001333664.1 NC_009643_p11 upper collar protein phrog_2038 upper collar connector connector 1 9264 10235
YP_001333666.1 NC_009643_p13 hypothetical protein singleton unknown function unknown function 1 10916 12403
YP_001333669.1 NC_009643_p16 holin singleton unknown function unknown function 1 14751 15056
YP_001333665.1 NC_009643_p12 lower collar protein phrog_3225 adaptor Ad4 connector 1 10207 10929
YP_001333670.1 NC_009643_p17 holin singleton unknown function unknown function 1 15049 15243
YP_001333661.1 NC_009643_p8 hypothetical protein singleton unknown function unknown function 1 4612 5643