| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009643 |
Definition |
Actinomyces phage Av-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae. |
DB of origin |
REFSEQ |
Length |
17171 |
Host Name |
Actinomyces naeslundii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
22 |
%GC |
49.5 |
Number of singletons |
14 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001333660.1 | NC_009643_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4303 | 4470 |
| YP_001333662.1 | NC_009643_p9 | major head protein | phrog_2006 | major head protein | head and packaging | 1 | 5646 | 7013 |
| YP_001333657.1 | NC_009643_p4 | hypothetical protein | phrog_6243 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 1114 | 1512 |
| YP_001333674.1 | NC_009643_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16386 | 16625 |
| YP_001333654.1 | NC_009643_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 285 | 539 |
| YP_001333667.1 | NC_009643_p14 | antireceptor | singleton | unknown function | unknown function | 1 | 12458 | 13759 |
| YP_001333671.1 | NC_009643_p18 | endolysin | phrog_21825 | endolysin | lysis | 1 | 15246 | 16064 |
| YP_001333673.1 | NC_009643_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16114 | 16386 |
| YP_001333659.1 | NC_009643_p6 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2591 | 4291 |
| YP_001333663.1 | NC_009643_p10 | tail protein | phrog_2248 | tail protein | tail | 1 | 7076 | 9271 |
| YP_001333668.1 | NC_009643_p15 | DNA encapsidation protein | phrog_2150 | terminase | head and packaging | 1 | 13759 | 14754 |
| YP_001333656.1 | NC_009643_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 758 | 1075 |
| YP_001333658.1 | NC_009643_p5 | terminal protein | singleton | unknown function | unknown function | 1 | 1561 | 2643 |
| YP_001333675.1 | NC_009643_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16780 | 16902 |
| YP_001333672.1 | NC_009643_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15884 | 16117 |
| YP_001333655.1 | NC_009643_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 543 | 800 |
| YP_001333664.1 | NC_009643_p11 | upper collar protein | phrog_2038 | upper collar connector | connector | 1 | 9264 | 10235 |
| YP_001333666.1 | NC_009643_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10916 | 12403 |
| YP_001333669.1 | NC_009643_p16 | holin | singleton | unknown function | unknown function | 1 | 14751 | 15056 |
| YP_001333665.1 | NC_009643_p12 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | 1 | 10207 | 10929 |
| YP_001333670.1 | NC_009643_p17 | holin | singleton | unknown function | unknown function | 1 | 15049 | 15243 |
| YP_001333661.1 | NC_009643_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4612 | 5643 |