| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009804 |
Definition |
Thermus phage P74-26, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Oshimavirus. |
DB of origin |
REFSEQ |
Length |
83319 |
Host Name |
Thermus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
116 |
%GC |
57.75 |
Number of singletons |
2 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001468029.1 | NC_009804_p59 | hypothetical protein | phrog_35179 | unknown function | unknown function | -1 | 32480 | 32842 |
| YP_001468043.1 | NC_009804_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40067 | 40180 |
| YP_001468019.1 | NC_009804_p49 | chaperone/ATP-dependent lon protease | phrog_27939 | ATP-dependent protease | other | -1 | 28058 | 28870 |
| YP_001467996.1 | NC_009804_p26 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 15161 | 15694 |
| YP_001468002.1 | NC_009804_p32 | hypothetical protein | phrog_23002 | unknown function | unknown function | -1 | 17909 | 18157 |
| YP_001468046.1 | NC_009804_p76 | hypothetical protein | phrog_38383 | unknown function | unknown function | -1 | 40734 | 40946 |
| YP_001468062.1 | NC_009804_p92 | hypothetical protein | phrog_37368 | unknown function | unknown function | 1 | 50407 | 50874 |
| YP_001468085.1 | NC_009804_p115 | hypothetical protein | phrog_27249 | unknown function | unknown function | 1 | 82955 | 83167 |
| YP_001468051.1 | NC_009804_p81 | ParB-like nuclease/partitioning protein | phrog_2159 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 42064 | 42750 |
| YP_001468078.1 | NC_009804_p108 | holin | phrog_26272 | holin | lysis | 1 | 79373 | 79729 |
| YP_001468003.1 | NC_009804_p33 | hypothetical protein | phrog_23312 | unknown function | unknown function | -1 | 18144 | 18725 |
| YP_001468066.1 | NC_009804_p96 | hypothetical protein | phrog_27201 | unknown function | unknown function | 1 | 67548 | 68141 |
| YP_001468005.1 | NC_009804_p35 | hypothetical protein | phrog_26453 | unknown function | unknown function | -1 | 18979 | 19938 |
| YP_001468021.1 | NC_009804_p51 | hypothetical protein | phrog_24247 | unknown function | unknown function | -1 | 29141 | 29491 |
| YP_001468076.1 | NC_009804_p106 | hypothetical protein | phrog_25634 | unknown function | unknown function | 1 | 78513 | 78890 |
| YP_001467986.1 | NC_009804_p16 | hypothetical protein | phrog_26370 | unknown function | unknown function | -1 | 11710 | 12051 |
| YP_001468075.1 | NC_009804_p105 | hypothetical protein | phrog_19901 | unknown function | unknown function | 1 | 78240 | 78488 |
| YP_001467993.1 | NC_009804_p23 | hypothetical protein | phrog_26465 | unknown function | unknown function | -1 | 14575 | 14787 |
| YP_001467999.1 | NC_009804_p29 | hypothetical protein | phrog_27671 | unknown function | unknown function | -1 | 16467 | 16748 |
| YP_001468074.2 | NC_009804_p104 | hypothetical protein | phrog_20420 | virion structural protein | head and packaging | 1 | 77350 | 78243 |
| YP_001468030.1 | NC_009804_p60 | WD40 repeat protein | singleton | unknown function | unknown function | -1 | 32910 | 33266 |
| YP_001467977.1 | NC_009804_p7 | hypothetical protein | phrog_27554 | unknown function | unknown function | -1 | 3478 | 3756 |
| YP_001468079.1 | NC_009804_p109 | metal-dependent hydrolase | phrog_7339 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 79726 | 80538 |
| YP_001467990.1 | NC_009804_p20 | hypothetical protein | phrog_18352 | unknown function | unknown function | -1 | 13127 | 13423 |
| YP_001467991.1 | NC_009804_p21 | hypothetical protein | phrog_27148 | unknown function | unknown function | -1 | 13442 | 13843 |
| YP_001468023.1 | NC_009804_p53 | hypothetical protein | phrog_22333 | unknown function | unknown function | -1 | 29802 | 29921 |
| YP_001468039.1 | NC_009804_p69 | hypothetical protein | phrog_8166 | unknown function | unknown function | -1 | 38847 | 39122 |
| YP_001468040.1 | NC_009804_p70 | hypothetical protein | phrog_24506 | tail fiber protein | tail | -1 | 39200 | 39529 |
| YP_001468044.1 | NC_009804_p74 | hypothetical protein | phrog_25413 | holin | lysis | -1 | 40181 | 40432 |
| YP_001468038.1 | NC_009804_p68 | hypothetical protein | phrog_8166 | unknown function | unknown function | -1 | 38478 | 38816 |
| YP_001467971.1 | NC_009804_p1 | hypothetical protein | phrog_23053 | unknown function | unknown function | -1 | 42 | 1145 |
| YP_001468036.1 | NC_009804_p66 | hypothetical protein | phrog_8166 | unknown function | unknown function | -1 | 37763 | 38074 |
| YP_001468026.1 | NC_009804_p56 | hypothetical protein | phrog_25884 | unknown function | unknown function | -1 | 31333 | 31536 |
| YP_001468056.1 | NC_009804_p86 | capsid scaffolding protein | phrog_22948 | head maturation protease | head and packaging | 1 | 46218 | 47237 |
| YP_001468055.1 | NC_009804_p85 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 44871 | 46217 |
| YP_001467992.1 | NC_009804_p22 | thymidylate synthase ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 13845 | 14603 |
| YP_001467998.1 | NC_009804_p28 | hypothetical protein | phrog_24783 | unknown function | unknown function | -1 | 16222 | 16470 |
| YP_001468081.1 | NC_009804_p111 | zinc metallopeptidase motif-containing protein | phrog_19616 | unknown function | unknown function | 1 | 80701 | 81126 |
| YP_001468012.1 | NC_009804_p42 | Archaeal-type Holliday junction resolvase | phrog_23036 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 22824 | 23357 |
| YP_001468065.1 | NC_009804_p95 | tape tail measure protein | phrog_23188 | tail length tape measure protein | tail | 1 | 52470 | 67490 |
| YP_001468070.1 | NC_009804_p100 | hypothetical protein | phrog_36175 | unknown function | unknown function | 1 | 73561 | 75084 |
| YP_001468007.1 | NC_009804_p37 | hypothetical protein | phrog_23987 | unknown function | unknown function | -1 | 20429 | 20854 |
| YP_001468057.1 | NC_009804_p87 | hypothetical protein | phrog_25566 | unknown function | unknown function | 1 | 47247 | 47687 |
| YP_001468050.1 | NC_009804_p80 | hypothetical protein | phrog_23911 | unknown function | unknown function | 1 | 41855 | 42067 |
| YP_001468064.1 | NC_009804_p94 | hypothetical protein | phrog_25449 | unknown function | unknown function | 1 | 51930 | 52424 |
| YP_001468006.1 | NC_009804_p36 | hypothetical protein | phrog_25321 | unknown function | unknown function | -1 | 19940 | 20383 |
| YP_001468045.1 | NC_009804_p75 | hypothetical protein | phrog_28681 | unknown function | unknown function | -1 | 40508 | 40663 |
| YP_001468082.1 | NC_009804_p112 | hypothetical protein | phrog_26286 | unknown function | unknown function | 1 | 81120 | 81560 |
| YP_001468015.1 | NC_009804_p45 | hypothetical protein | phrog_26177 | unknown function | unknown function | -1 | 25144 | 25245 |
| YP_001468025.1 | NC_009804_p55 | hypothetical protein | phrog_25930 | unknown function | unknown function | -1 | 30831 | 31325 |
| YP_001467974.1 | NC_009804_p4 | hypothetical protein | phrog_21999 | unknown function | unknown function | -1 | 1629 | 1865 |
| YP_001467989.1 | NC_009804_p19 | hypothetical protein | phrog_22859 | unknown function | unknown function | -1 | 12697 | 13116 |
| YP_001467978.1 | NC_009804_p8 | hypothetical protein | phrog_26762 | unknown function | unknown function | -1 | 3753 | 4070 |
| YP_001468077.1 | NC_009804_p107 | peptidoglycan hydrolase | phrog_7767 | metallo-endopeptidase | other | 1 | 78904 | 79365 |
| YP_001468041.1 | NC_009804_p71 | hypothetical protein | phrog_32161 | unknown function | unknown function | -1 | 39594 | 39755 |
| YP_001467980.1 | NC_009804_p10 | hypothetical protein | phrog_24861 | unknown function | unknown function | -1 | 4881 | 5222 |
| YP_001467997.1 | NC_009804_p27 | dUTP diphosphatase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 15749 | 16225 |
| YP_001467976.1 | NC_009804_p6 | hypothetical protein | phrog_26617 | unknown function | unknown function | -1 | 2997 | 3485 |
| YP_001468083.1 | NC_009804_p113 | hypothetical protein | phrog_25046 | unknown function | unknown function | 1 | 81563 | 82114 |
| YP_001468035.1 | NC_009804_p65 | hypothetical protein | phrog_26290 | unknown function | unknown function | -1 | 36672 | 36875 |
| YP_001467973.1 | NC_009804_p3 | hypothetical protein | phrog_23876 | unknown function | unknown function | -1 | 1412 | 1645 |
| YP_001467983.1 | NC_009804_p13 | ribonucleoside-triphosphate reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 7996 | 9981 |
| YP_001467979.1 | NC_009804_p9 | RecB family exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 4067 | 4909 |
| YP_001467987.1 | NC_009804_p17 | hypothetical protein | phrog_21258 | unknown function | unknown function | -1 | 12055 | 12414 |
| YP_001468061.1 | NC_009804_p91 | hypothetical protein | phrog_26161 | unknown function | unknown function | 1 | 49544 | 50410 |
| YP_001468072.1 | NC_009804_p102 | WD40-like beta-propeller protein | phrog_24171 | unknown function | unknown function | 1 | 75501 | 77183 |
| YP_001468011.1 | NC_009804_p41 | hypothetical protein | phrog_25198 | unknown function | unknown function | -1 | 22341 | 22664 |
| YP_001468037.1 | NC_009804_p67 | hypothetical protein | phrog_8166 | unknown function | unknown function | -1 | 38142 | 38432 |
| YP_001468022.1 | NC_009804_p52 | hypothetical protein | phrog_26538 | unknown function | unknown function | -1 | 29560 | 29805 |
| YP_001468031.1 | NC_009804_p61 | hypothetical protein | phrog_23953 | unknown function | unknown function | -1 | 33340 | 34251 |
| YP_001468059.1 | NC_009804_p89 | hypothetical protein | phrog_24482 | unknown function | unknown function | 1 | 48925 | 49149 |
| YP_001468032.1 | NC_009804_p62 | hypothetical protein | phrog_25317 | head protein | head and packaging | -1 | 34285 | 36216 |
| YP_001467972.1 | NC_009804_p2 | hypothetical protein | phrog_25741 | unknown function | unknown function | -1 | 1157 | 1393 |
| YP_001468068.1 | NC_009804_p98 | hypothetical protein | phrog_23173 | unknown function | unknown function | 1 | 68831 | 69952 |
| YP_001468008.1 | NC_009804_p38 | eukaryotic type DNA primase small subunit | phrog_16345 | primase | DNA, RNA and nucleotide metabolism | -1 | 20858 | 21874 |
| YP_001468027.1 | NC_009804_p57 | hypothetical protein | phrog_464 | unknown function | unknown function | -1 | 31664 | 32002 |
| YP_001468047.1 | NC_009804_p77 | hypothetical protein | phrog_35962 | unknown function | unknown function | -1 | 41131 | 41286 |
| YP_001468067.1 | NC_009804_p97 | lectin-like sugar binding domain | phrog_24001 | unknown function | unknown function | 1 | 68147 | 68830 |
| YP_001468020.1 | NC_009804_p50 | hypothetical protein | phrog_27912 | unknown function | unknown function | -1 | 28876 | 29169 |
| YP_001468001.1 | NC_009804_p31 | hypothetical protein | phrog_27768 | unknown function | unknown function | -1 | 17272 | 17847 |
| YP_001468017.1 | NC_009804_p47 | hypothetical protein | phrog_26681 | unknown function | unknown function | -1 | 25960 | 26370 |
| YP_001468063.1 | NC_009804_p93 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 50884 | 51930 |
| YP_001467981.1 | NC_009804_p11 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 5226 | 7412 |
| YP_001468086.1 | NC_009804_p116 | hypothetical protein | phrog_23241 | unknown function | unknown function | 1 | 83161 | 83319 |
| YP_001468042.1 | NC_009804_p72 | hypothetical protein | phrog_8166 | unknown function | unknown function | -1 | 39807 | 40052 |
| YP_001467985.1 | NC_009804_p15 | hypothetical protein | phrog_27600 | unknown function | unknown function | -1 | 11203 | 11697 |
| YP_001468010.1 | NC_009804_p40 | hypothetical protein | phrog_25604 | unknown function | unknown function | -1 | 22081 | 22344 |
| YP_001468048.1 | NC_009804_p78 | hypothetical protein | phrog_23517 | unknown function | unknown function | 1 | 41144 | 41245 |
| YP_001468018.1 | NC_009804_p48 | Von Willebrand factor type A domain | phrog_23488 | unknown function | unknown function | -1 | 26358 | 28049 |
| YP_001468014.1 | NC_009804_p44 | replicative DNA helicase DnaB | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 23943 | 25154 |
| YP_001468054.1 | NC_009804_p84 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 43402 | 44859 |
| YP_001467994.1 | NC_009804_p24 | hypothetical protein | phrog_26554 | unknown function | unknown function | -1 | 14789 | 14962 |
| YP_001468013.1 | NC_009804_p43 | hypothetical protein | phrog_25218 | unknown function | unknown function | -1 | 23357 | 23932 |
| YP_001467975.1 | NC_009804_p5 | phage XerD-like integrase | phrog_1 | integrase | integration and excision | 1 | 2027 | 3010 |
| YP_001468053.1 | NC_009804_p83 | hypothetical protein | phrog_23257 | terminase small subunit | head and packaging | 1 | 42906 | 43421 |
| YP_001468071.1 | NC_009804_p101 | hypothetical protein | phrog_24255 | unknown function | unknown function | 1 | 75094 | 75468 |
| YP_001468024.1 | NC_009804_p54 | metal-dependent hydrolase | phrog_4191 | peptidase | other | -1 | 29950 | 30834 |
| YP_001468060.1 | NC_009804_p90 | hypothetical protein | phrog_25426 | unknown function | unknown function | 1 | 49149 | 49541 |
| YP_001468033.1 | NC_009804_p63 | hypothetical protein | phrog_24097 | unknown function | unknown function | -1 | 36223 | 36504 |
| YP_001468004.1 | NC_009804_p34 | hypothetical protein | phrog_23854 | unknown function | unknown function | -1 | 18758 | 18979 |
| YP_001467982.1 | NC_009804_p12 | hypothetical protein | phrog_26929 | unknown function | unknown function | -1 | 7384 | 7986 |
| YP_001468009.1 | NC_009804_p39 | hypothetical protein | phrog_27787 | unknown function | unknown function | -1 | 21864 | 22088 |
| YP_001468049.1 | NC_009804_p79 | hypothetical protein | phrog_24814 | unknown function | unknown function | 1 | 41242 | 41883 |
| YP_001468000.1 | NC_009804_p30 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 16745 | 17275 |
| YP_001468084.1 | NC_009804_p114 | hypothetical protein | phrog_26382 | unknown function | unknown function | 1 | 82116 | 82949 |
| YP_001467984.1 | NC_009804_p14 | C5 cytosine-specific DNA methylase | phrog_116 | DNA methyltransferase | other | -1 | 9938 | 11044 |
| YP_001468058.1 | NC_009804_p88 | major head protein | phrog_29 | major head protein | head and packaging | 1 | 47690 | 48919 |
| YP_001468016.1 | NC_009804_p46 | hypothetical protein | phrog_27776 | unknown function | unknown function | -1 | 25314 | 25967 |
| YP_001467988.1 | NC_009804_p18 | hypothetical protein | phrog_25703 | unknown function | unknown function | -1 | 12423 | 12728 |
| YP_001468080.1 | NC_009804_p110 | hypothetical protein | phrog_20603 | unknown function | unknown function | 1 | 80525 | 80704 |
| YP_001468034.1 | NC_009804_p64 | hypothetical protein | phrog_23303 | unknown function | unknown function | -1 | 36485 | 36601 |
| YP_001468073.1 | NC_009804_p103 | hypothetical protein | phrog_22985 | unknown function | unknown function | 1 | 77207 | 77353 |
| YP_001468052.1 | NC_009804_p82 | hypothetical protein | phrog_27659 | unknown function | unknown function | 1 | 42761 | 42922 |
| YP_001468028.1 | NC_009804_p58 | hypothetical protein | phrog_24624 | unknown function | unknown function | -1 | 32046 | 32402 |
| YP_001467995.1 | NC_009804_p25 | hypothetical protein | phrog_22989 | unknown function | unknown function | -1 | 14980 | 15156 |
| YP_001468069.1 | NC_009804_p99 | hypothetical protein | phrog_24447 | unknown function | unknown function | 1 | 70062 | 73553 |