Genomic map of Listeria phage A500 (NC_009810)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009810
Definition
Listeria phage A500, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38867
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
36.68
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001468447.1 NC_009810_p61 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 37208 37642
YP_001468442.1 NC_009810_p56 hypothetical protein phrog_6184 unknown function unknown function 1 35968 36159
YP_001468390.1 NC_009810_p4 hypothetical protein phrog_581 minor head protein head and packaging 1 3383 4522
YP_001468425.1 NC_009810_p39 hypothetical protein phrog_23908 unknown function unknown function 1 29422 29511
YP_001468429.1 NC_009810_p43 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30400 31059
YP_001468399.1 NC_009810_p13 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 8184 8423
YP_001468398.1 NC_009810_p12 major tail protein phrog_820 major tail protein tail 1 7724 8161
YP_001468423.1 NC_009810_p37 hypothetical protein phrog_1124 transcriptional regulator transcription regulation 1 28689 29213
YP_001468436.1 NC_009810_p50 hypothetical protein phrog_24824 unknown function unknown function 1 33689 33865
YP_001468410.1 NC_009810_p24 holin phrog_1299 holin lysis 1 19725 20015
YP_001468433.1 NC_009810_p47 hypothetical protein phrog_20345 unknown function unknown function 1 32513 32722
YP_001468392.1 NC_009810_p6 major capsid protein phrog_544 major head protein head and packaging 1 5223 6059
YP_001468404.1 NC_009810_p18 hypothetical protein phrog_326 tail protein with endopeptidase domain other 1 15722 16744
YP_001468414.1 NC_009810_p28 hypothetical protein singleton unknown function unknown function 1 23171 23353
YP_001468401.1 NC_009810_p15 hypothetical protein phrog_706 unknown function unknown function 1 8904 9506
YP_001468430.1 NC_009810_p44 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 31076 32053
YP_001468389.1 NC_009810_p3 portal protein phrog_533 portal protein head and packaging 1 1878 3377
YP_001468397.1 NC_009810_p11 hypothetical protein phrog_913 minor head protein head and packaging 1 7314 7721
YP_001468391.1 NC_009810_p5 scaffold protein phrog_194 head scaffolding protein head and packaging 1 4601 5200
YP_001468409.1 NC_009810_p23 hypothetical protein phrog_8806 unknown function unknown function 1 19356 19721
YP_001468405.1 NC_009810_p19 hypothetical protein phrog_4577 tail protein tail 1 16745 17770
YP_001468416.1 NC_009810_p30 integrase phrog_1 integrase integration and excision -1 24281 25483
YP_001468445.1 NC_009810_p59 hypothetical protein phrog_7279 unknown function unknown function 1 36888 37013
YP_001468420.1 NC_009810_p34 hypothetical protein phrog_8019 unknown function unknown function 1 27250 27477
YP_001468424.1 NC_009810_p38 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 29220 29405
YP_001468448.1 NC_009810_p62 hypothetical protein phrog_8187 unknown function unknown function 1 38006 38566
YP_001468428.1 NC_009810_p42 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 29918 30394
YP_001468396.1 NC_009810_p10 hypothetical protein phrog_556 minor head protein head and packaging 1 6976 7314
YP_001468431.1 NC_009810_p45 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 32050 32217
YP_001468449.1 NC_009810_p63 hypothetical protein phrog_4960 unknown function unknown function 1 38663 38848
YP_001468388.1 NC_009810_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 534 1865
YP_001468402.1 NC_009810_p16 tape measure protein phrog_1686 tail length tape measure protein tail 1 9517 14883
YP_001468435.1 NC_009810_p49 hypothetical protein phrog_24658 unknown function unknown function 1 33324 33692
YP_001468419.1 NC_009810_p33 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 27015 27236
YP_001468415.1 NC_009810_p29 hypothetical protein phrog_4724 unknown function unknown function 1 23826 24032
YP_001468437.1 NC_009810_p51 hypothetical protein phrog_8684 unknown function unknown function 1 33852 34313
YP_001468403.1 NC_009810_p17 hypothetical protein phrog_33 distal tail protein Dit tail 1 14880 15707
YP_001468418.1 NC_009810_p32 repressor phrog_8 transcriptional regulator transcription regulation -1 26424 26852
YP_001468387.1 NC_009810_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 23 565
YP_001468412.1 NC_009810_p26 hypothetical protein phrog_3446 unknown function unknown function 1 21378 21929
YP_001468438.1 NC_009810_p52 hypothetical protein phrog_3205 unknown function unknown function 1 34310 34831
YP_001468443.1 NC_009810_p57 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36104 36508
YP_001468394.1 NC_009810_p8 hypothetical protein phrog_541 head-tail adaptor connector 1 6219 6614
YP_001468400.1 NC_009810_p14 hypothetical protein phrog_1061 unknown function unknown function 1 8476 8898
YP_001468432.1 NC_009810_p46 hypothetical protein phrog_9484 unknown function unknown function 1 32223 32516
YP_001468417.1 NC_009810_p31 hypothetical protein phrog_11062 unknown function unknown function -1 25549 26289
YP_001468395.1 NC_009810_p9 hypothetical protein phrog_793 head-tail adaptor connector 1 6614 6976
YP_001468406.1 NC_009810_p20 hypothetical protein phrog_3285 minor tail protein tail 1 17767 18834
YP_001468421.1 NC_009810_p35 hypothetical protein phrog_4074 unknown function unknown function 1 27489 27773
YP_001468427.1 NC_009810_p41 hypothetical protein phrog_11613 unknown function unknown function 1 29727 29921
YP_001468411.1 NC_009810_p25 endolysin phrog_15351 endolysin lysis 1 20015 20884
YP_001468407.1 NC_009810_p21 hypothetical protein phrog_1766 tail fiber protein tail 1 18831 19172
YP_001468434.1 NC_009810_p48 hypothetical protein phrog_121 unknown function unknown function 1 32719 33327
YP_001468393.1 NC_009810_p7 hypothetical protein phrog_2250 unknown function unknown function 1 6059 6217
YP_001468408.1 NC_009810_p22 hypothetical protein phrog_134 unknown function unknown function 1 19173 19319
YP_001468426.1 NC_009810_p40 hypothetical protein phrog_21539 unknown function unknown function 1 29504 29632
YP_001468413.1 NC_009810_p27 hypothetical protein singleton unknown function unknown function 1 22516 23148
YP_001468441.1 NC_009810_p55 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 35465 35947
YP_001468439.1 NC_009810_p53 hypothetical protein phrog_923 unknown function unknown function 1 34828 35268
YP_001468446.1 NC_009810_p60 hypothetical protein phrog_11352 unknown function unknown function 1 37025 37189
YP_001468440.1 NC_009810_p54 hypothetical protein singleton unknown function unknown function 1 35265 35465
YP_001468444.1 NC_009810_p58 hypothetical protein phrog_5229 unknown function unknown function 1 36512 36895
YP_001468422.1 NC_009810_p36 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 27786 28565