Genomic map of Listeria phage B025 (NC_009812)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009812
Definition
Listeria phage B025, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
42653
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
35.09
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001468678.1 NC_009812_p39 hypothetical protein phrog_823 unknown function unknown function 1 27362 27604
YP_001468682.1 NC_009812_p43 hypothetical protein phrog_1 integrase integration and excision 1 29040 29984
YP_001468697.1 NC_009812_p58 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 35993 37135
YP_001468669.1 NC_009812_p30 hypothetical protein singleton unknown function unknown function 1 23023 23175
YP_001468664.1 NC_009812_p25 endolysin phrog_6523 endolysin lysis 1 20257 21087
YP_001468692.1 NC_009812_p53 hypothetical protein phrog_11886 unknown function unknown function 1 33810 34037
YP_001468644.1 NC_009812_p5 major capsid protein phrog_10 major head protein head and packaging 1 3916 5067
YP_001468655.1 NC_009812_p16 hypothetical protein phrog_326 tail protein with endopeptidase domain other 1 13670 15262
YP_001468659.1 NC_009812_p20 hypothetical protein singleton unknown function unknown function 1 18708 18983
YP_001468691.1 NC_009812_p52 hypothetical protein phrog_15098 unknown function unknown function 1 33379 33813
YP_001468660.1 NC_009812_p21 hypothetical protein phrog_1382 unknown function unknown function 1 18989 19153
YP_001468687.1 NC_009812_p48 hypothetical protein phrog_24552 unknown function unknown function 1 32066 32395
YP_001468665.1 NC_009812_p26 hypothetical protein phrog_38672 unknown function unknown function 1 21099 21533
YP_001468699.1 NC_009812_p60 hypothetical protein phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 37663 39936
YP_001468670.1 NC_009812_p31 hypothetical protein singleton unknown function unknown function 1 23299 23463
YP_001468698.1 NC_009812_p59 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 37158 37640
YP_001468695.1 NC_009812_p56 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 34631 35110
YP_001468661.1 NC_009812_p22 hypothetical protein phrog_2968 tail protein tail 1 19179 19634
YP_001468696.1 NC_009812_p57 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 35123 35815
YP_001468688.1 NC_009812_p49 hypothetical protein phrog_27807 unknown function unknown function 1 32392 32664
YP_001468671.1 NC_009812_p32 hypothetical protein phrog_4945 unknown function unknown function 1 23531 23764
YP_001468650.1 NC_009812_p11 major tail protein phrog_88 major tail protein tail 1 6702 7289
YP_001468694.1 NC_009812_p55 hypothetical protein phrog_7593 unknown function unknown function 1 34246 34629
YP_001468647.1 NC_009812_p8 hypothetical protein phrog_25 head closure Hc1 connector 1 5537 5902
YP_001468703.1 NC_009812_p64 hypothetical protein singleton unknown function unknown function 1 42047 42250
YP_001468677.1 NC_009812_p38 hypothetical protein phrog_1468 transcriptional repressor transcription regulation 1 27157 27360
YP_001468646.1 NC_009812_p7 hypothetical protein phrog_749 unknown function unknown function 1 5254 5553
YP_001468685.1 NC_009812_p46 hypothetical protein phrog_18487 unknown function unknown function 1 31458 31859
YP_001468700.1 NC_009812_p61 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 40225 40539
YP_001468689.1 NC_009812_p50 hypothetical protein phrog_13542 unknown function unknown function 1 32664 32843
YP_001468667.1 NC_009812_p28 hypothetical protein phrog_1936 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover 1 22442 22834
YP_001468686.1 NC_009812_p47 hypothetical protein phrog_4124 unknown function unknown function 1 31856 32065
YP_001468684.1 NC_009812_p45 hypothetical protein phrog_121 unknown function unknown function 1 30674 31237
YP_001468656.1 NC_009812_p17 hypothetical protein phrog_10588 tail protein tail 1 15262 15486
YP_001468643.1 NC_009812_p4 potential scaffold protein phrog_94 head maturation protease head and packaging 1 3140 3889
YP_001468642.1 NC_009812_p3 potential part of the capsid-tail connector phrog_12 portal protein head and packaging 1 2013 3143
YP_001468673.1 NC_009812_p34 integrase phrog_1 integrase integration and excision -1 24147 25301
YP_001468676.1 NC_009812_p37 repressor phrog_8 transcriptional regulator transcription regulation -1 26570 26890
YP_001468648.1 NC_009812_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5899 6300
YP_001468675.1 NC_009812_p36 hypothetical protein phrog_87 metallo-protease other -1 26101 26553
YP_001468653.1 NC_009812_p14 hypothetical protein phrog_167 tail length tape measure protein tail 1 7908 12830
YP_001468663.1 NC_009812_p24 holin phrog_297 holin lysis 1 20009 20257
YP_001468683.1 NC_009812_p44 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 29997 30677
YP_001468652.1 NC_009812_p13 hypothetical protein phrog_5294 unknown function unknown function 1 7743 7892
YP_001468693.1 NC_009812_p54 hypothetical protein phrog_7205 unknown function unknown function 1 34076 34249
YP_001468702.1 NC_009812_p63 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 41185 41610
YP_001468674.1 NC_009812_p35 hypothetical protein phrog_3727 unknown function unknown function -1 25436 26050
YP_001468679.1 NC_009812_p40 hypothetical protein phrog_8639 unknown function unknown function 1 27607 27792
YP_001468681.1 NC_009812_p42 hypothetical protein phrog_1071 DNA methyltransferase other 1 28316 29029
YP_001468672.1 NC_009812_p33 hypothetical protein phrog_4724 unknown function unknown function 1 23761 23952
YP_001468649.1 NC_009812_p10 hypothetical protein phrog_78 tail terminator connector 1 6297 6680
YP_001468662.1 NC_009812_p23 hypothetical protein phrog_2990 unknown function unknown function 1 19601 19996
YP_001468654.1 NC_009812_p15 hypothetical protein phrog_33 distal tail protein Dit tail 1 12830 13660
YP_001468680.1 NC_009812_p41 hypothetical protein phrog_8328 unknown function unknown function 1 28027 28179
YP_001468657.1 NC_009812_p18 hypothetical protein phrog_2234 tail spike protein tail 1 15486 17405
YP_001468645.1 NC_009812_p6 hypothetical protein phrog_933 unknown function unknown function 1 5074 5244
YP_001468701.1 NC_009812_p62 hypothetical protein phrog_4897 kinase other 1 40542 41180
YP_001468640.1 NC_009812_p1 hypothetical protein phrog_2343 terminase small subunit head and packaging 1 62 361
YP_001468668.1 NC_009812_p29 hypothetical protein singleton unknown function unknown function 1 22859 23017
YP_001468658.1 NC_009812_p19 hypothetical protein phrog_20746 unknown function unknown function 1 17417 18691
YP_001468666.1 NC_009812_p27 hypothetical protein phrog_1281 unknown function unknown function 1 21942 22445
YP_001468651.1 NC_009812_p12 hypothetical protein phrog_187 head-tail adaptor connector 1 7324 7692
YP_001468704.1 NC_009812_p65 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42295 42609
YP_001468690.1 NC_009812_p51 hypothetical protein phrog_923 unknown function unknown function 1 32840 33379
YP_001468641.1 NC_009812_p2 hypothetical protein phrog_9 terminase large subunit head and packaging 1 358 2001