Genomic map of Listeria phage B054 (NC_009813)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009813
Definition
Listeria phage B054, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
48172
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
36.21
Number of singletons
5
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001468722.1 NC_009813_p18 tape measure protein phrog_167 tail length tape measure protein tail 1 12057 16772
YP_001468716.1 NC_009813_p12 hypothetical protein phrog_1661 unknown function unknown function 1 9204 9578
YP_001468741.1 NC_009813_p37 hypothetical protein singleton unknown function unknown function -1 25646 25912
YP_001468724.1 NC_009813_p20 hypothetical protein phrog_1264 unknown function unknown function 1 17341 17706
YP_001468737.1 NC_009813_p33 endolysin phrog_489 endolysin lysis 1 23638 24603
YP_001468766.1 NC_009813_p62 hypothetical protein phrog_7484 unknown function unknown function 1 39214 40575
YP_001468762.1 NC_009813_p58 hypothetical protein phrog_5403 unknown function unknown function 1 37606 38226
YP_001468727.1 NC_009813_p23 hypothetical protein phrog_120 baseplate wedge subunit tail 1 18848 19210
YP_001468715.1 NC_009813_p11 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 8605 9204
YP_001468725.1 NC_009813_p21 hypothetical protein phrog_196 baseplate hub tail 1 17706 18512
YP_001468709.1 NC_009813_p5 hypothetical protein phrog_36451 unknown function unknown function 1 5146 5316
YP_001468751.1 NC_009813_p47 hypothetical protein phrog_35940 unknown function unknown function 1 30906 31133
YP_001468769.1 NC_009813_p65 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 41769 42449
YP_001468774.1 NC_009813_p70 hypothetical protein phrog_398 unknown function unknown function 1 43296 43856
YP_001468763.1 NC_009813_p59 hypothetical protein phrog_36543 unknown function unknown function 1 38267 38647
YP_001468773.1 NC_009813_p69 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 43033 43284
YP_001468726.1 NC_009813_p22 hypothetical protein phrog_11 baseplate spike tail 1 18513 18851
YP_001468714.1 NC_009813_p10 hypothetical protein phrog_302 virion structural protein head and packaging 1 8270 8605
YP_001468748.1 NC_009813_p44 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29826 30119
YP_001468732.1 NC_009813_p28 hypothetical protein phrog_1382 unknown function unknown function 1 22113 22238
YP_001468753.1 NC_009813_p49 hypothetical protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 31479 33422
YP_001468778.1 NC_009813_p74 hypothetical protein phrog_10400 unknown function unknown function 1 45270 45386
YP_001468719.1 NC_009813_p15 hypothetical protein phrog_280 virion structural protein head and packaging 1 11073 11471
YP_001468743.1 NC_009813_p39 hypothetical protein phrog_37056 unknown function unknown function -1 27560 27952
YP_001468768.1 NC_009813_p64 hypothetical protein phrog_1 integrase integration and excision 1 40812 41756
YP_001468707.1 NC_009813_p3 structural protein phrog_146 portal protein head and packaging 1 2362 3747
YP_001468776.1 NC_009813_p72 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 44372 45139
YP_001468757.1 NC_009813_p53 hypothetical protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 35758 36573
YP_001468738.1 NC_009813_p34 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 24666 24887
YP_001468767.1 NC_009813_p63 hypothetical protein singleton unknown function unknown function 1 40588 40812
YP_001468759.1 NC_009813_p55 hypothetical protein phrog_37289 unknown function unknown function 1 36751 36957
YP_001468761.1 NC_009813_p57 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37148 37585
YP_001468729.1 NC_009813_p25 hypothetical protein phrog_1160 baseplate protein tail 1 20344 20985
YP_001468781.1 NC_009813_p77 hypothetical protein phrog_498 DNA methyltransferase other 1 45957 47294
YP_001468708.1 NC_009813_p4 hypothetical protein phrog_4529 minor head protein and DNA pilot head and packaging 1 3740 5149
YP_001468777.1 NC_009813_p73 hypothetical protein singleton unknown function unknown function 1 45087 45257
YP_001468749.1 NC_009813_p45 hypothetical protein phrog_35221 unknown function unknown function 1 30124 30288
YP_001468718.1 NC_009813_p14 structural protein phrog_205 tail sheath tail 1 10061 11056
YP_001468706.1 NC_009813_p2 terminase large subunit phrog_38 terminase large subunit head and packaging 1 888 2348
YP_001468710.1 NC_009813_p6 hypothetical protein phrog_530 head maturation protease head and packaging 1 5365 6474
YP_001468711.1 NC_009813_p7 structural protein phrog_563 virion structural protein head and packaging 1 6474 6923
YP_001468739.1 NC_009813_p35 hypothetical protein phrog_14056 unknown function unknown function -1 24915 25118
YP_001468744.1 NC_009813_p40 hypothetical protein phrog_87 metallo-protease other -1 28000 28419
YP_001468736.1 NC_009813_p32 holin phrog_297 holin lysis 1 23381 23638
YP_001468746.1 NC_009813_p42 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 29025 29210
YP_001468740.1 NC_009813_p36 hypothetical protein phrog_33216 unknown function unknown function -1 25132 25506
YP_001468784.1 NC_009813_p80 hypothetical protein phrog_4960 unknown function unknown function 1 47928 48152
YP_001468728.1 NC_009813_p24 hypothetical protein phrog_6 baseplate wedge subunit tail 1 19203 20354
YP_001468747.1 NC_009813_p43 hypothetical protein phrog_1124 transcriptional regulator transcription regulation 1 29287 29811
YP_001468779.1 NC_009813_p75 hypothetical protein singleton unknown function unknown function 1 45576 45710
YP_001468712.1 NC_009813_p8 structural protein phrog_264 major head protein head and packaging 1 6944 7849
YP_001468750.1 NC_009813_p46 hypothetical protein phrog_33992 unknown function unknown function 1 30438 30728
YP_001468720.1 NC_009813_p16 hypothetical protein phrog_1778 unknown function unknown function 1 11524 11880
YP_001468764.1 NC_009813_p60 hypothetical protein phrog_32887 unknown function unknown function 1 38607 38783
YP_001468775.1 NC_009813_p71 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 43937 44359
YP_001468713.1 NC_009813_p9 hypothetical protein phrog_1983 unknown function unknown function 1 7872 8258
YP_001468733.1 NC_009813_p29 hypothetical protein phrog_2968 tail protein tail 1 22268 22714
YP_001468730.1 NC_009813_p26 hypothetical protein phrog_35034 unknown function unknown function 1 21006 21734
YP_001468765.1 NC_009813_p61 hypothetical protein phrog_7445 unknown function unknown function 1 38795 39217
YP_001468782.1 NC_009813_p78 hypothetical protein phrog_10302 unknown function unknown function 1 47342 47539
YP_001468717.1 NC_009813_p13 hypothetical protein phrog_1232 tail terminator connector 1 9568 10056
YP_001468705.1 NC_009813_p1 small terminase phrog_1889 terminase small subunit head and packaging 1 26 910
YP_001468783.1 NC_009813_p79 hypothetical protein phrog_1476 unknown function unknown function 1 47670 47900
YP_001468771.1 NC_009813_p67 hypothetical protein phrog_6739 unknown function unknown function 1 42757 42897
YP_001468735.1 NC_009813_p31 hypothetical protein singleton unknown function unknown function 1 23155 23370
YP_001468721.1 NC_009813_p17 hypothetical protein phrog_1995 unknown function unknown function 1 11843 12055
YP_001468758.1 NC_009813_p54 hypothetical protein phrog_20889 unknown function unknown function 1 36570 36764
YP_001468755.1 NC_009813_p51 hypothetical protein phrog_392 metal-dependent hydrolase other 1 34168 34905
YP_001468754.1 NC_009813_p50 hypothetical protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 33423 34208
YP_001468723.1 NC_009813_p19 hypothetical protein phrog_1517 endolysin lysis 1 16778 17341
YP_001468770.1 NC_009813_p66 hypothetical protein phrog_3930 unknown function unknown function 1 42446 42739
YP_001468760.1 NC_009813_p56 hypothetical protein phrog_33309 unknown function unknown function 1 36958 37167
YP_001468772.1 NC_009813_p68 hypothetical protein phrog_4292 unknown function unknown function 1 42884 43036
YP_001468731.1 NC_009813_p27 hypothetical protein phrog_35186 unknown function unknown function 1 21740 22081
YP_001468742.1 NC_009813_p38 hypothetical protein phrog_1 integrase integration and excision -1 26288 27463
YP_001468756.1 NC_009813_p52 hypothetical protein phrog_2562 replication initiation protein DNA, RNA and nucleotide metabolism 1 34917 35834
YP_001468734.1 NC_009813_p30 hypothetical protein phrog_2990 unknown function unknown function 1 22690 23136
YP_001468780.1 NC_009813_p76 hypothetical protein phrog_32566 unknown function unknown function 1 45667 45960
YP_001468752.1 NC_009813_p48 hypothetical protein phrog_34236 unknown function unknown function 1 31151 31492
YP_001468745.1 NC_009813_p41 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 28436 28864