Genomic map of Listeria phage P35 (NC_009814)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009814
Definition
Listeria phage P35, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
35822
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
40.81
Number of singletons
21
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001468802.1 NC_009814_p18 holin phrog_199 holin lysis 1 15427 15876
YP_001468819.1 NC_009814_p35 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 27102 27341
YP_001468823.1 NC_009814_p39 hypothetical protein phrog_7738 unknown function unknown function 1 28784 29215
YP_001468836.1 NC_009814_p52 hypothetical protein phrog_38720 unknown function unknown function 1 33357 33548
YP_001468812.1 NC_009814_p28 endolysin phrog_15351 endolysin lysis 1 19450 20325
YP_001468808.1 NC_009814_p24 hypothetical protein singleton unknown function unknown function 1 18218 18460
YP_001468793.1 NC_009814_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7409 7834
YP_001468794.1 NC_009814_p10 hypothetical protein phrog_957 head protein head and packaging 1 7834 8298
YP_001468811.1 NC_009814_p27 hypothetical protein singleton unknown function unknown function 1 19272 19433
YP_001468839.1 NC_009814_p55 hypothetical protein singleton unknown function unknown function 1 34677 35090
YP_001468791.1 NC_009814_p7 hypothetical protein phrog_1236 head protein head and packaging 1 6518 7054
YP_001468810.1 NC_009814_p26 hypothetical protein singleton unknown function unknown function 1 19103 19261
YP_001468822.1 NC_009814_p38 hypothetical protein phrog_4897 kinase other 1 28203 28787
YP_001468837.1 NC_009814_p53 hypothetical protein phrog_4400 unknown function unknown function 1 33550 34179
YP_001468831.1 NC_009814_p47 hypothetical protein phrog_1494 unknown function unknown function 1 31617 31799
YP_001468814.1 NC_009814_p30 hypothetical protein phrog_392 metal-dependent hydrolase other 1 20884 21456
YP_001468828.1 NC_009814_p44 hypothetical protein singleton unknown function unknown function 1 30647 31012
YP_001468832.1 NC_009814_p48 hypothetical protein singleton unknown function unknown function 1 31908 32012
YP_001468792.1 NC_009814_p8 hypothetical protein phrog_1059 head-tail adaptor connector 1 7054 7407
YP_001468817.1 NC_009814_p33 hypothetical protein phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism 1 23285 25192
YP_001468826.1 NC_009814_p42 hypothetical protein singleton unknown function unknown function 1 29957 30172
YP_001468807.1 NC_009814_p23 hypothetical protein singleton unknown function unknown function 1 17448 18221
YP_001468813.1 NC_009814_p29 hypothetical protein singleton unknown function unknown function 1 20439 20834
YP_001468806.1 NC_009814_p22 hypothetical protein singleton unknown function unknown function 1 17119 17448
YP_001468821.1 NC_009814_p37 hypothetical protein phrog_25554 unknown function unknown function 1 27649 28203
YP_001468790.1 NC_009814_p6 major capsid protein phrog_422 major head protein head and packaging 1 5543 6451
YP_001468834.1 NC_009814_p50 hypothetical protein singleton unknown function unknown function 1 32298 32465
YP_001468827.1 NC_009814_p43 hypothetical protein singleton unknown function unknown function 1 30183 30644
YP_001468820.1 NC_009814_p36 hypothetical protein phrog_14860 unknown function unknown function 1 27437 27652
YP_001468799.1 NC_009814_p15 hypothetical protein phrog_13564 minor tail protein tail 1 12036 13295
YP_001468830.1 NC_009814_p46 hypothetical protein singleton unknown function unknown function 1 31316 31624
YP_001468805.1 NC_009814_p21 hypothetical protein singleton unknown function unknown function 1 16905 17117
YP_001468787.1 NC_009814_p3 portal protein phrog_64 portal protein head and packaging 1 2008 3621
YP_001468797.1 NC_009814_p13 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 9875 10147
YP_001468818.1 NC_009814_p34 hypothetical protein phrog_864 DNA primase DNA, RNA and nucleotide metabolism 1 25205 27109
YP_001468815.1 NC_009814_p31 hypothetical protein phrog_674 unknown function unknown function 1 21497 22243
YP_001468804.1 NC_009814_p20 hypothetical protein singleton unknown function unknown function 1 16660 16905
YP_001468786.1 NC_009814_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 637 1959
YP_001468840.1 NC_009814_p56 hypothetical protein singleton unknown function unknown function 1 35063 35326
YP_001468795.1 NC_009814_p11 hypothetical protein phrog_885 major tail protein tail 1 8299 9279
YP_001468824.1 NC_009814_p40 hypothetical protein singleton unknown function unknown function 1 29290 29490
YP_001468798.1 NC_009814_p14 tail protein phrog_58 tail length tape measure protein tail 1 10153 12039
YP_001468816.1 NC_009814_p32 hypothetical protein phrog_6479 unknown function unknown function 1 22263 22958
YP_001468788.1 NC_009814_p4 minor head protein phrog_115 minor head protein head and packaging 1 3872 4780
YP_001468801.1 NC_009814_p17 hypothetical protein phrog_6779 tail protein tail 1 14459 15295
YP_001468833.1 NC_009814_p49 hypothetical protein singleton unknown function unknown function 1 32009 32320
YP_001468803.1 NC_009814_p19 hypothetical protein phrog_35662 unknown function unknown function 1 16299 16544
YP_001468825.1 NC_009814_p41 hypothetical protein phrog_34622 unknown function unknown function 1 29487 29957
YP_001468829.1 NC_009814_p45 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 31005 31319
YP_001468809.1 NC_009814_p25 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 18444 19067
YP_001468838.1 NC_009814_p54 hypothetical protein singleton unknown function unknown function 1 34270 34674
YP_001468785.1 NC_009814_p1 hypothetical protein singleton unknown function unknown function 1 29 649
YP_001468800.1 NC_009814_p16 hypothetical protein phrog_7064 tail protein tail 1 13288 14451
YP_001468835.1 NC_009814_p51 hypothetical protein singleton unknown function unknown function 1 32449 33357
YP_001468796.1 NC_009814_p12 hypothetical protein phrog_1021 unknown function unknown function 1 9363 9821
YP_001468789.1 NC_009814_p5 scaffold protein phrog_194 head scaffolding protein head and packaging 1 4918 5499