| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009817 |
Definition |
Lactococcus phage KSY1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
79232 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
130 |
%GC |
35.11 |
Number of singletons |
94 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001469118.1 | NC_009817_p119 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 74817 | 75092 |
| YP_001469119.1 | NC_009817_p120 | hypothetical protein | phrog_6648 | unknown function | unknown function | 1 | 75089 | 75355 |
| YP_001469050.1 | NC_009817_p51 | nicotinamide mononucleotide transporter | phrog_1880 | PnuC-like nicotinamide mononucleotide transport | moron, auxiliary metabolic gene and host takeover | 1 | 30036 | 30785 |
| YP_001469124.1 | NC_009817_p125 | hypothetical protein | phrog_22719 | unknown function | unknown function | 1 | 76295 | 76453 |
| YP_001469127.1 | NC_009817_p128 | hypothetical protein | singleton | unknown function | unknown function | 1 | 77334 | 78137 |
| YP_001469128.1 | NC_009817_p129 | hypothetical protein | singleton | unknown function | unknown function | 1 | 78130 | 78510 |
| YP_001469079.1 | NC_009817_p80 | RuvC resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53907 | 54428 |
| YP_001469105.1 | NC_009817_p106 | hypothetical protein | singleton | unknown function | unknown function | 1 | 70052 | 70150 |
| YP_001469034.1 | NC_009817_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20072 | 20611 |
| YP_001469038.1 | NC_009817_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22839 | 23243 |
| YP_001469069.1 | NC_009817_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45966 | 46118 |
| YP_001469070.1 | NC_009817_p71 | holin | phrog_35009 | holin | lysis | 1 | 46115 | 46474 |
| YP_001469027.1 | NC_009817_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13736 | 14050 |
| YP_001469021.1 | NC_009817_p22 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 9335 | 9577 |
| YP_001469062.1 | NC_009817_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41727 | 41891 |
| YP_001469009.1 | NC_009817_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3194 | 3367 |
| YP_001469059.1 | NC_009817_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35432 | 37159 |
| YP_001469016.1 | NC_009817_p17 | hypothetical protein | phrog_14776 | unknown function | unknown function | 1 | 8301 | 8531 |
| YP_001469113.1 | NC_009817_p114 | hypothetical protein | singleton | unknown function | unknown function | 1 | 73887 | 74096 |
| YP_001469098.1 | NC_009817_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67415 | 67771 |
| YP_001469012.1 | NC_009817_p13 | RNA polymerase | singleton | unknown function | unknown function | 1 | 5377 | 7209 |
| YP_001469051.1 | NC_009817_p52 | endolysin | singleton | unknown function | unknown function | 1 | 30786 | 31385 |
| YP_001469120.1 | NC_009817_p121 | hypothetical protein | phrog_8095 | unknown function | unknown function | 1 | 75336 | 75560 |
| YP_001469099.1 | NC_009817_p100 | hypothetical protein | phrog_14776 | unknown function | unknown function | 1 | 67761 | 67994 |
| YP_001469001.1 | NC_009817_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 397 | 663 |
| YP_001469101.1 | NC_009817_p102 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68217 | 68729 |
| YP_001469082.1 | NC_009817_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54955 | 55281 |
| YP_001469096.1 | NC_009817_p97 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66096 | 67004 |
| YP_001469121.1 | NC_009817_p122 | hypothetical protein | singleton | unknown function | unknown function | 1 | 75561 | 75686 |
| YP_001469010.1 | NC_009817_p11 | DNA ligase | phrog_3359 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 3381 | 4796 |
| YP_001469043.1 | NC_009817_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25565 | 25975 |
| YP_001469044.1 | NC_009817_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25997 | 26710 |
| YP_001469125.1 | NC_009817_p126 | hypothetical protein | singleton | unknown function | unknown function | 1 | 76598 | 76753 |
| YP_001469052.1 | NC_009817_p53 | holin | singleton | unknown function | unknown function | 1 | 30853 | 31047 |
| YP_001469029.1 | NC_009817_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15493 | 15702 |
| YP_001469085.1 | NC_009817_p86 | exonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 56094 | 56711 |
| YP_001469076.1 | NC_009817_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52664 | 53371 |
| YP_001469049.1 | NC_009817_p50 | deoxynucleoside kinase | phrog_761 | thymidylate kinase | other | 1 | 29197 | 30060 |
| YP_001469116.1 | NC_009817_p117 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74458 | 74589 |
| YP_001469083.1 | NC_009817_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55281 | 55400 |
| YP_001469068.1 | NC_009817_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45721 | 45957 |
| YP_001469042.1 | NC_009817_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25390 | 25572 |
| YP_001469064.1 | NC_009817_p65 | baseplate | singleton | unknown function | unknown function | 1 | 42564 | 42749 |
| YP_001469006.1 | NC_009817_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2321 | 2500 |
| YP_001469123.1 | NC_009817_p124 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 75798 | 76298 |
| YP_001469104.1 | NC_009817_p105 | hypothetical protein | phrog_36252 | unknown function | unknown function | 1 | 69581 | 69970 |
| YP_001469106.1 | NC_009817_p107 | hypothetical protein | phrog_2470 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 70345 | 70671 |
| YP_001469022.1 | NC_009817_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9588 | 9890 |
| YP_001469014.1 | NC_009817_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7909 | 8106 |
| YP_001469017.1 | NC_009817_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8561 | 8665 |
| YP_001469024.1 | NC_009817_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10191 | 10643 |
| YP_001469114.1 | NC_009817_p115 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74107 | 74298 |
| YP_001469081.1 | NC_009817_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54610 | 54852 |
| YP_001469031.1 | NC_009817_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15987 | 18449 |
| YP_001469074.1 | NC_009817_p75 | hypothetical protein | phrog_2248 | tail protein | tail | 1 | 48853 | 50916 |
| YP_001469057.1 | NC_009817_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33970 | 35076 |
| YP_001469108.1 | NC_009817_p109 | hypothetical protein | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 71951 | 73150 |
| YP_001469111.1 | NC_009817_p112 | hypothetical protein | singleton | unknown function | unknown function | 1 | 73507 | 73692 |
| YP_001469088.1 | NC_009817_p89 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 58457 | 59197 |
| YP_001469071.1 | NC_009817_p72 | holin | phrog_6918 | holin | lysis | 1 | 46464 | 46802 |
| YP_001469023.1 | NC_009817_p24 | hypothetical protein | phrog_1225 | unknown function | unknown function | 1 | 9890 | 10189 |
| YP_001469035.1 | NC_009817_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20604 | 21245 |
| YP_001469008.1 | NC_009817_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2839 | 3087 |
| YP_001469047.1 | NC_009817_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28465 | 28914 |
| YP_001469058.1 | NC_009817_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35179 | 35427 |
| YP_001469004.1 | NC_009817_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1629 | 2102 |
| YP_001469040.1 | NC_009817_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23874 | 24353 |
| YP_001469020.1 | NC_009817_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9152 | 9298 |
| YP_001469109.1 | NC_009817_p110 | hypothetical protein | singleton | unknown function | unknown function | 1 | 73143 | 73328 |
| YP_001469097.1 | NC_009817_p98 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67107 | 67409 |
| YP_001469065.1 | NC_009817_p66 | baseplate | phrog_7911 | tail protein | tail | 1 | 42765 | 43271 |
| YP_001469037.1 | NC_009817_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22381 | 22836 |
| YP_001469103.1 | NC_009817_p104 | ribonuclease HI | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 69138 | 69581 |
| YP_001469005.1 | NC_009817_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2104 | 2310 |
| YP_001469067.1 | NC_009817_p68 | baseplate | phrog_7911 | tail protein | tail | 1 | 44274 | 45632 |
| YP_001469026.1 | NC_009817_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11736 | 13550 |
| YP_001469025.1 | NC_009817_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10693 | 11733 |
| YP_001469032.1 | NC_009817_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18449 | 18877 |
| YP_001469039.1 | NC_009817_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23240 | 23908 |
| YP_001469030.1 | NC_009817_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15689 | 15973 |
| YP_001469102.1 | NC_009817_p103 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68731 | 69111 |
| YP_001469084.1 | NC_009817_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55400 | 56110 |
| YP_001469061.1 | NC_009817_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41603 | 41698 |
| YP_001469080.1 | NC_009817_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54418 | 54588 |
| YP_001469117.1 | NC_009817_p118 | hypothetical protein | phrog_23614 | unknown function | unknown function | 1 | 74590 | 74817 |
| YP_001469000.1 | NC_009817_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 281 | 385 |
| YP_001469093.1 | NC_009817_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62219 | 63184 |
| YP_001469003.1 | NC_009817_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1409 | 1627 |
| YP_001469019.1 | NC_009817_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8971 | 9150 |
| YP_001469018.1 | NC_009817_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8667 | 8915 |
| YP_001469028.1 | NC_009817_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14028 | 15506 |
| YP_001469015.1 | NC_009817_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8204 | 8311 |
| YP_001469122.1 | NC_009817_p123 | hypothetical protein | singleton | unknown function | unknown function | 1 | 75683 | 75811 |
| YP_001469036.1 | NC_009817_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21247 | 22341 |
| YP_001469060.1 | NC_009817_p61 | tail fiber | singleton | unknown function | unknown function | 1 | 37205 | 41518 |
| YP_001469077.1 | NC_009817_p78 | hypothetical protein | phrog_7406 | unknown function | unknown function | 1 | 53381 | 53653 |
| YP_001469126.1 | NC_009817_p127 | hypothetical protein | singleton | unknown function | unknown function | 1 | 76758 | 76964 |
| YP_001469056.1 | NC_009817_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33773 | 33961 |
| YP_001469033.1 | NC_009817_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18945 | 20072 |
| YP_001469095.1 | NC_009817_p96 | intein-containing DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 63412 | 66099 |
| YP_001469072.1 | NC_009817_p73 | endolysin | phrog_3393 | endolysin | lysis | 1 | 46815 | 47858 |
| YP_001469091.1 | NC_009817_p92 | RecB exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 60777 | 61907 |
| YP_001469048.1 | NC_009817_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28927 | 29148 |
| YP_001469063.1 | NC_009817_p64 | baseplate | phrog_6042 | minor head protein | head and packaging | 1 | 41848 | 42447 |
| YP_001469090.1 | NC_009817_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60236 | 60769 |
| YP_001469011.1 | NC_009817_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4796 | 5350 |
| YP_001469129.1 | NC_009817_p130 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 78576 | 79136 |
| YP_001469094.1 | NC_009817_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 63194 | 63415 |
| YP_001469100.1 | NC_009817_p101 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68029 | 68220 |
| YP_001469110.1 | NC_009817_p111 | hypothetical protein | singleton | unknown function | unknown function | 1 | 73328 | 73507 |
| YP_001469089.1 | NC_009817_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59178 | 60215 |
| YP_001469013.1 | NC_009817_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7289 | 7897 |
| YP_001469053.1 | NC_009817_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31474 | 32196 |
| YP_001469078.1 | NC_009817_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53650 | 53910 |
| YP_001469112.1 | NC_009817_p113 | hypothetical protein | singleton | unknown function | unknown function | 1 | 73702 | 73878 |
| YP_001469055.1 | NC_009817_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32727 | 33701 |
| YP_001469115.1 | NC_009817_p116 | hypothetical protein | phrog_17274 | unknown function | unknown function | 1 | 74298 | 74471 |
| YP_001469107.1 | NC_009817_p108 | hypothetical protein | phrog_6282 | unknown function | unknown function | 1 | 71430 | 71918 |
| YP_001469092.1 | NC_009817_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61948 | 62226 |
| YP_001469054.1 | NC_009817_p55 | tail | singleton | unknown function | unknown function | 1 | 32207 | 32710 |
| YP_001469007.1 | NC_009817_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2502 | 2849 |
| YP_001469073.1 | NC_009817_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48072 | 48719 |
| YP_001469075.1 | NC_009817_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50916 | 52664 |
| YP_001469002.1 | NC_009817_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 812 | 922 |
| YP_001469041.1 | NC_009817_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24350 | 25309 |
| YP_001469045.1 | NC_009817_p46 | hypothetical protein | phrog_2006 | major head protein | head and packaging | 1 | 26814 | 28148 |
| YP_001469066.1 | NC_009817_p67 | baseplate | phrog_8913 | minor head protein | head and packaging | 1 | 43357 | 44256 |
| YP_001469087.1 | NC_009817_p88 | hypothetical protein | phrog_1284 | unknown function | unknown function | 1 | 57103 | 58440 |
| YP_001469046.1 | NC_009817_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28253 | 28465 |
| YP_001469086.1 | NC_009817_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56724 | 57047 |