| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_009818 |
Definition |
Pseudomonas phage MP22, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus. |
DB of origin |
REFSEQ |
Length |
36409 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
64.19 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001469131.1 | NC_009818_p2 | Ner-like protein | phrog_769 | transcriptional repressor | transcription regulation | 1 | 1064 | 1420 |
| YP_001469142.1 | NC_009818_p13 | hypothetical protein | phrog_12417 | unknown function | unknown function | 1 | 7556 | 8044 |
| YP_001469170.1 | NC_009818_p41 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 23200 | 23697 |
| YP_001469158.1 | NC_009818_p29 | hypothetical protein | phrog_20563 | unknown function | unknown function | 1 | 17439 | 17735 |
| YP_001469162.1 | NC_009818_p33 | hypothetical protein | phrog_371 | major head protein | head and packaging | 1 | 19753 | 20667 |
| YP_001469137.1 | NC_009818_p8 | hypothetical protein | phrog_3765 | unknown function | unknown function | 1 | 5527 | 5643 |
| YP_001469156.1 | NC_009818_p27 | virion morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 15615 | 16901 |
| YP_001469163.1 | NC_009818_p34 | hypothetical protein | phrog_4833 | unknown function | unknown function | 1 | 20734 | 21174 |
| YP_001469157.1 | NC_009818_p28 | virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 16901 | 17368 |
| YP_001469147.1 | NC_009818_p18 | hypothetical protein | phrog_3648 | unknown function | unknown function | 1 | 9627 | 9974 |
| YP_001469146.1 | NC_009818_p17 | integral membrane protein | phrog_836 | late transcriptional activator | transcription regulation | 1 | 9074 | 9523 |
| YP_001469132.1 | NC_009818_p3 | hypothetical protein | phrog_2345 | transcriptional regulator | transcription regulation | 1 | 1423 | 1857 |
| YP_001469130.1 | NC_009818_p1 | c repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 170 | 799 |
| YP_001469151.1 | NC_009818_p22 | hypothetical protein | phrog_2975 | Rz-like spanin | lysis | 1 | 11044 | 11445 |
| YP_001469172.1 | NC_009818_p43 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 27530 | 28486 |
| YP_001469168.1 | NC_009818_p39 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 22423 | 23196 |
| YP_001469166.1 | NC_009818_p37 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 21751 | 22224 |
| YP_001469148.1 | NC_009818_p19 | hypothetical protein | phrog_1024 | unknown function | unknown function | 1 | 9919 | 10389 |
| YP_001469179.1 | NC_009818_p50 | hypothetical protein | phrog_2875 | virion structural protein | head and packaging | 1 | 34582 | 35733 |
| YP_001469134.1 | NC_009818_p5 | transposase A | phrog_310 | transposase | integration and excision | 1 | 2059 | 4131 |
| YP_001469139.1 | NC_009818_p10 | hypothetical protein | phrog_2043 | unknown function | unknown function | 1 | 6046 | 6330 |
| YP_001469155.1 | NC_009818_p26 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 14035 | 15615 |
| YP_001469143.1 | NC_009818_p14 | hypothetical protein | phrog_3652 | unknown function | unknown function | 1 | 8047 | 8316 |
| YP_001469153.1 | NC_009818_p24 | hypothetical protein | phrog_756 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11753 | 12253 |
| YP_001469173.1 | NC_009818_p44 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 28488 | 29411 |
| YP_001469159.1 | NC_009818_p30 | hypothetical protein | phrog_9439 | unknown function | unknown function | 1 | 17792 | 18214 |
| YP_001469145.1 | NC_009818_p16 | hypothetical protein | phrog_286 | unknown function | unknown function | 1 | 8680 | 9081 |
| YP_001469136.1 | NC_009818_p7 | hypothetical protein | phrog_2030 | transcriptional regulator | transcription regulation | 1 | 4895 | 5542 |
| YP_001469140.1 | NC_009818_p11 | host nuclease inhibitor protein | phrog_18351 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 6347 | 7243 |
| YP_001469152.1 | NC_009818_p23 | hypothetical protein | phrog_1103 | unknown function | unknown function | 1 | 11556 | 11744 |
| YP_001469138.1 | NC_009818_p9 | hypothetical protein | phrog_2119 | unknown function | unknown function | 1 | 5643 | 6056 |
| YP_001469149.1 | NC_009818_p20 | structural protein P5 | phrog_873 | endolysin | head and packaging | 1 | 10389 | 10805 |
| YP_001469165.1 | NC_009818_p36 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 21338 | 21754 |
| YP_001469160.1 | NC_009818_p31 | hypothetical protein | phrog_18309 | unknown function | unknown function | 1 | 18328 | 18432 |
| YP_001469133.1 | NC_009818_p4 | hypothetical protein | phrog_4468 | unknown function | unknown function | 1 | 1857 | 2066 |
| YP_001469141.1 | NC_009818_p12 | hypothetical protein | phrog_4367 | unknown function | unknown function | 1 | 7245 | 7553 |
| YP_001469161.1 | NC_009818_p32 | protease (I) and scaffold (Z) proteins | phrog_328 | head maturation protease | head and packaging | 1 | 18778 | 19749 |
| YP_001469150.1 | NC_009818_p21 | hypothetical protein | phrog_4057 | unknown function | unknown function | 1 | 10805 | 11047 |
| YP_001469144.1 | NC_009818_p15 | hypothetical protein | phrog_4093 | unknown function | unknown function | 1 | 8387 | 8683 |
| YP_001469167.1 | NC_009818_p38 | hypothetical protein | phrog_3129 | unknown function | unknown function | 1 | 22212 | 22397 |
| YP_001469178.1 | NC_009818_p49 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 32378 | 34585 |
| YP_001469164.1 | NC_009818_p35 | hypothetical protein | phrog_3376 | unknown function | unknown function | 1 | 21174 | 21341 |
| YP_001469171.1 | NC_009818_p42 | tail component protein | phrog_2335 | tail length tape measure protein | tail | 1 | 23824 | 27522 |
| YP_001469174.1 | NC_009818_p45 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 29411 | 31114 |
| YP_001469154.1 | NC_009818_p25 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 12250 | 14025 |
| YP_001469180.1 | NC_009818_p51 | hypothetical protein | phrog_2432 | unknown function | unknown function | 1 | 35730 | 36020 |
| YP_001469169.1 | NC_009818_p40 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 23200 | 23822 |
| YP_001469175.1 | NC_009818_p46 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 31149 | 31925 |
| YP_001469135.1 | NC_009818_p6 | DNA transposition protein | phrog_296 | DNA transposition protein | integration and excision | 1 | 4128 | 4898 |
| YP_001469177.1 | NC_009818_p48 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 32170 | 32388 |
| YP_001469176.1 | NC_009818_p47 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 31934 | 32173 |