Genomic map of Pseudomonas virus MP22 (NC_009818)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009818
Definition
Pseudomonas phage MP22, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus.
DB of origin
REFSEQ
Length
36409
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
64.19
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001469131.1 NC_009818_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1064 1420
YP_001469142.1 NC_009818_p13 hypothetical protein phrog_12417 unknown function unknown function 1 7556 8044
YP_001469170.1 NC_009818_p41 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23200 23697
YP_001469158.1 NC_009818_p29 hypothetical protein phrog_20563 unknown function unknown function 1 17439 17735
YP_001469162.1 NC_009818_p33 hypothetical protein phrog_371 major head protein head and packaging 1 19753 20667
YP_001469137.1 NC_009818_p8 hypothetical protein phrog_3765 unknown function unknown function 1 5527 5643
YP_001469156.1 NC_009818_p27 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 15615 16901
YP_001469163.1 NC_009818_p34 hypothetical protein phrog_4833 unknown function unknown function 1 20734 21174
YP_001469157.1 NC_009818_p28 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 16901 17368
YP_001469147.1 NC_009818_p18 hypothetical protein phrog_3648 unknown function unknown function 1 9627 9974
YP_001469146.1 NC_009818_p17 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 9074 9523
YP_001469132.1 NC_009818_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1423 1857
YP_001469130.1 NC_009818_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 799
YP_001469151.1 NC_009818_p22 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11044 11445
YP_001469172.1 NC_009818_p43 hypothetical protein phrog_687 structural protein head and packaging 1 27530 28486
YP_001469168.1 NC_009818_p39 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 22423 23196
YP_001469166.1 NC_009818_p37 hypothetical protein phrog_209 portal protein head and packaging 1 21751 22224
YP_001469148.1 NC_009818_p19 hypothetical protein phrog_1024 unknown function unknown function 1 9919 10389
YP_001469179.1 NC_009818_p50 hypothetical protein phrog_2875 virion structural protein head and packaging 1 34582 35733
YP_001469134.1 NC_009818_p5 transposase A phrog_310 transposase integration and excision 1 2059 4131
YP_001469139.1 NC_009818_p10 hypothetical protein phrog_2043 unknown function unknown function 1 6046 6330
YP_001469155.1 NC_009818_p26 portal protein phrog_113 portal protein head and packaging 1 14035 15615
YP_001469143.1 NC_009818_p14 hypothetical protein phrog_3652 unknown function unknown function 1 8047 8316
YP_001469153.1 NC_009818_p24 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 11753 12253
YP_001469173.1 NC_009818_p44 hypothetical protein phrog_687 structural protein head and packaging 1 28488 29411
YP_001469159.1 NC_009818_p30 hypothetical protein phrog_9439 unknown function unknown function 1 17792 18214
YP_001469145.1 NC_009818_p16 hypothetical protein phrog_286 unknown function unknown function 1 8680 9081
YP_001469136.1 NC_009818_p7 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 4895 5542
YP_001469140.1 NC_009818_p11 host nuclease inhibitor protein phrog_18351 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 6347 7243
YP_001469152.1 NC_009818_p23 hypothetical protein phrog_1103 unknown function unknown function 1 11556 11744
YP_001469138.1 NC_009818_p9 hypothetical protein phrog_2119 unknown function unknown function 1 5643 6056
YP_001469149.1 NC_009818_p20 structural protein P5 phrog_873 endolysin head and packaging 1 10389 10805
YP_001469165.1 NC_009818_p36 hypothetical protein phrog_195 head-tail adaptor connector 1 21338 21754
YP_001469160.1 NC_009818_p31 hypothetical protein phrog_18309 unknown function unknown function 1 18328 18432
YP_001469133.1 NC_009818_p4 hypothetical protein phrog_4468 unknown function unknown function 1 1857 2066
YP_001469141.1 NC_009818_p12 hypothetical protein phrog_4367 unknown function unknown function 1 7245 7553
YP_001469161.1 NC_009818_p32 protease (I) and scaffold (Z) proteins phrog_328 head maturation protease head and packaging 1 18778 19749
YP_001469150.1 NC_009818_p21 hypothetical protein phrog_4057 unknown function unknown function 1 10805 11047
YP_001469144.1 NC_009818_p15 hypothetical protein phrog_4093 unknown function unknown function 1 8387 8683
YP_001469167.1 NC_009818_p38 hypothetical protein phrog_3129 unknown function unknown function 1 22212 22397
YP_001469178.1 NC_009818_p49 hypothetical protein phrog_1101 tail protein tail 1 32378 34585
YP_001469164.1 NC_009818_p35 hypothetical protein phrog_3376 unknown function unknown function 1 21174 21341
YP_001469171.1 NC_009818_p42 tail component protein phrog_2335 tail length tape measure protein tail 1 23824 27522
YP_001469174.1 NC_009818_p45 hypothetical protein phrog_1082 tail assembly protein tail 1 29411 31114
YP_001469154.1 NC_009818_p25 hypothetical protein phrog_38 terminase large subunit head and packaging 1 12250 14025
YP_001469180.1 NC_009818_p51 hypothetical protein phrog_2432 unknown function unknown function 1 35730 36020
YP_001469169.1 NC_009818_p40 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23200 23822
YP_001469175.1 NC_009818_p46 hypothetical protein phrog_778 tail assembly protein tail 1 31149 31925
YP_001469135.1 NC_009818_p6 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4128 4898
YP_001469177.1 NC_009818_p48 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32170 32388
YP_001469176.1 NC_009818_p47 hypothetical protein phrog_1180 tail assembly chaperone tail 1 31934 32173