functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_009819 |
Definition |
Streptococcus phage P9, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
40539 |
Host Name |
Streptococcus equi |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
39.65 |
Number of singletons |
1 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_001469219.1 | NC_009819_p39 | hypothetical protein | phrog_2567 | unknown function | unknown function | 1 | 24402 | 24635 |
YP_001469212.1 | NC_009819_p32 | major head protein | phrog_544 | major head protein | head and packaging | 1 | 20958 | 21845 |
YP_001469181.1 | NC_009819_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 144 | 1223 |
YP_001469186.1 | NC_009819_p6 | hypothetical protein | phrog_17628 | unknown function | unknown function | 1 | 3619 | 3858 |
YP_001469187.1 | NC_009819_p7 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3924 | 4199 |
YP_001469222.1 | NC_009819_p42 | hypothetical protein | phrog_3095 | tail protein with endopeptidase activity | other | 1 | 29671 | 31653 |
YP_001469228.1 | NC_009819_p48 | holin | phrog_297 | holin | lysis | 1 | 36013 | 36240 |
YP_001469221.1 | NC_009819_p41 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28819 | 29661 |
YP_001469201.1 | NC_009819_p21 | hypothetical protein | phrog_19693 | unknown function | unknown function | 1 | 13895 | 14068 |
YP_001469183.1 | NC_009819_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1904 | 2287 |
YP_001469225.1 | NC_009819_p45 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 34686 | 35117 |
YP_001469198.1 | NC_009819_p18 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12136 | 12411 |
YP_001469233.1 | NC_009819_p53 | streptodornase | phrog_5170 | unknown function | unknown function | -1 | 39095 | 40087 |
YP_001469214.1 | NC_009819_p34 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 22224 | 22502 |
YP_001469185.1 | NC_009819_p5 | transcriptional repressor | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3416 | 3607 |
YP_001469197.1 | NC_009819_p17 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 10276 | 11769 |
YP_001469203.1 | NC_009819_p23 | hypothetical protein | phrog_20587 | unknown function | unknown function | 1 | 14334 | 14459 |
YP_001469193.1 | NC_009819_p13 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5681 | 6838 |
YP_001469226.1 | NC_009819_p46 | hypothetical protein | phrog_1554 | unknown function | unknown function | 1 | 35120 | 35731 |
YP_001469182.1 | NC_009819_p2 | hypothetical protein | phrog_4431 | unknown function | unknown function | -1 | 1342 | 1893 |
YP_001469200.1 | NC_009819_p20 | hypothetical protein | phrog_5605 | unknown function | unknown function | 1 | 13731 | 13898 |
YP_001469196.1 | NC_009819_p16 | primase | phrog_9765 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 9384 | 10322 |
YP_001469211.1 | NC_009819_p31 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 20376 | 20945 |
YP_001469204.1 | NC_009819_p24 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 14540 | 14956 |
YP_001469199.1 | NC_009819_p19 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 12408 | 13730 |
YP_001469210.1 | NC_009819_p30 | hypothetical protein | phrog_903 | unknown function | unknown function | 1 | 19942 | 20199 |
YP_001469231.1 | NC_009819_p51 | hypothetical protein | phrog_1281 | unknown function | unknown function | 1 | 37711 | 38232 |
YP_001469206.1 | NC_009819_p26 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15488 | 16765 |
YP_001469205.1 | NC_009819_p25 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 15004 | 15498 |
YP_001469232.1 | NC_009819_p52 | hypothetical protein | phrog_5763 | unknown function | unknown function | 1 | 38223 | 39032 |
YP_001469207.1 | NC_009819_p27 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 16781 | 18313 |
YP_001469195.1 | NC_009819_p15 | polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7457 | 9379 |
YP_001469217.1 | NC_009819_p37 | hypothetical protein | phrog_238 | major tail protein | tail | 1 | 23218 | 23745 |
YP_001469184.1 | NC_009819_p4 | phage repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2301 | 2660 |
YP_001469194.1 | NC_009819_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7109 | 7414 |
YP_001469213.1 | NC_009819_p33 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 21857 | 22213 |
YP_001469188.1 | NC_009819_p8 | hypothetical protein | phrog_3050 | unknown function | unknown function | 1 | 4196 | 4366 |
YP_001469209.1 | NC_009819_p29 | hypothetical protein | phrog_11185 | unknown function | unknown function | 1 | 19749 | 19937 |
YP_001469218.1 | NC_009819_p38 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 23872 | 24327 |
YP_001469216.1 | NC_009819_p36 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 22847 | 23206 |
YP_001469192.1 | NC_009819_p12 | hypothetical protein | phrog_5053 | unknown function | unknown function | 1 | 5382 | 5681 |
YP_001469230.1 | NC_009819_p50 | lysin | phrog_1309 | endolysin | lysis | 1 | 36356 | 37558 |
YP_001469215.1 | NC_009819_p35 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 22499 | 22843 |
YP_001469229.1 | NC_009819_p49 | hypothetical protein | phrog_16966 | unknown function | unknown function | 1 | 36249 | 36359 |
YP_001469224.1 | NC_009819_p44 | hypothetical protein | phrog_1899 | unknown function | unknown function | 1 | 32772 | 34598 |
YP_001469190.1 | NC_009819_p10 | hypothetical protein | phrog_18674 | unknown function | unknown function | 1 | 4942 | 5094 |
YP_001469220.1 | NC_009819_p40 | tail protein | phrog_1204 | tail protein | tail | 1 | 24650 | 28807 |
YP_001469189.1 | NC_009819_p9 | hypothetical protein | phrog_5227 | unknown function | unknown function | 1 | 4562 | 4945 |
YP_001469223.1 | NC_009819_p43 | hylauronidase | phrog_2332 | hyaluronidase | other | 1 | 31653 | 32753 |
YP_001469227.1 | NC_009819_p47 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 35741 | 36016 |
YP_001469191.1 | NC_009819_p11 | hypothetical protein | phrog_5386 | unknown function | unknown function | 1 | 5091 | 5294 |
YP_001469208.1 | NC_009819_p28 | minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 18273 | 19721 |
YP_001469202.1 | NC_009819_p22 | hypothetical protein | phrog_1027 | unknown function | unknown function | 1 | 14065 | 14337 |