Genomic map of Mycobacterium phage Tweety (NC_009820)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009820
Definition
Mycobacterium phage Tweety, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
58692
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
109
%GC
61.73
Number of singletons
6
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001469249.1 NC_009820_p16 minor tail protein phrog_110 minor tail protein tail 1 14860 16569
YP_001469273.1 NC_009820_p40 hypothetical protein singleton unknown function unknown function -1 31391 31600
YP_001469283.1 NC_009820_p50 hypothetical protein phrog_2021 unknown function unknown function 1 37155 37592
YP_001469240.1 NC_009820_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
YP_001469287.1 NC_009820_p54 hypothetical protein phrog_3416 unknown function unknown function 1 38644 39768
YP_001469311.1 NC_009820_p78 hypothetical protein phrog_1943 unknown function unknown function 1 48767 48961
YP_001469244.1 NC_009820_p11 major tail subunit phrog_476 major tail protein tail 1 7633 8442
YP_001469266.1 NC_009820_p33 hypothetical protein phrog_404 minor tail protein tail 1 28981 29355
YP_001469316.1 NC_009820_p83 hypothetical protein phrog_722 unknown function unknown function 1 50302 50490
YP_001469252.1 NC_009820_p19 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19985 21871
YP_001469320.1 NC_009820_p87 hypothetical protein phrog_1901 unknown function unknown function 1 51494 51688
YP_001469246.1 NC_009820_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8579 9130
YP_001469259.1 NC_009820_p26 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25301 25492
YP_001469268.1 NC_009820_p35 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29600 30421
YP_001469337.1 NC_009820_p104 hypothetical protein phrog_9549 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 56284 56958
YP_001469242.1 NC_009820_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6781 7110
YP_001469291.1 NC_009820_p58 hypothetical protein phrog_2096 unknown function unknown function 1 40870 41370
YP_001469338.1 NC_009820_p105 hypothetical protein phrog_1693 unknown function unknown function 1 57039 57245
YP_001469324.1 NC_009820_p91 hypothetical protein phrog_5186 unknown function unknown function 1 52261 52434
YP_001469339.1 NC_009820_p106 hypothetical protein phrog_17935 unknown function unknown function 1 57242 57367
YP_001469330.1 NC_009820_p97 hypothetical protein singleton unknown function unknown function 1 54054 54290
YP_001469341.1 NC_009820_p108 glycoasyl transferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57599 58225
YP_001469265.1 NC_009820_p32 hypothetical protein phrog_443 holin lysis 1 28751 28984
YP_001469307.1 NC_009820_p74 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 47222 47596
YP_001469276.1 NC_009820_p43 integrase phrog_1 integrase integration and excision 1 32478 33767
YP_001469243.1 NC_009820_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7097 7504
YP_001469319.1 NC_009820_p86 hypothetical protein phrog_647 unknown function unknown function 1 51088 51372
YP_001469239.1 NC_009820_p6 major capsid subunit phrog_267 major head protein head and packaging 1 5062 5883
YP_001469256.1 NC_009820_p23 hypothetical protein phrog_2005 minor tail protein tail 1 23415 23669
YP_001469315.1 NC_009820_p82 hypothetical protein phrog_647 unknown function unknown function 1 50025 50309
YP_001469340.1 NC_009820_p107 hypothetical protein phrog_8053 unknown function unknown function 1 57393 57602
YP_001469279.2 NC_009820_p46 HTH DNA binding domain protein phrog_6267 transcriptional repressor transcription regulation 1 35314 35556
YP_001469260.1 NC_009820_p27 hypothetical protein phrog_411 unknown function unknown function 1 25642 25926
YP_001469288.1 NC_009820_p55 hypothetical protein phrog_1849 unknown function unknown function 1 39847 40128
YP_001469284.1 NC_009820_p51 hypothetical protein phrog_1816 unknown function unknown function 1 37589 37777
YP_001469255.1 NC_009820_p22 hypothetical protein phrog_240 head protein head and packaging 1 23051 23392
YP_001469322.1 NC_009820_p89 hypothetical protein phrog_1091 unknown function unknown function 1 51948 52127
YP_001469305.1 NC_009820_p72 hypothetical protein phrog_116 DNA methyltransferase other 1 45824 46936
YP_001469247.1 NC_009820_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9534 13064
YP_001469328.1 NC_009820_p95 HTH DNA binding domain protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53662 53886
YP_001469258.1 NC_009820_p25 hypothetical protein phrog_754 minor tail protein tail 1 24317 25297
YP_001469269.1 NC_009820_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30508 30729
YP_001469261.1 NC_009820_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26076 26228
YP_001469267.1 NC_009820_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29380 29613
YP_001469300.1 NC_009820_p67 hypothetical protein phrog_10510 unknown function unknown function 1 44108 44341
YP_001469314.1 NC_009820_p81 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism 1 49480 50028
YP_001469333.1 NC_009820_p100 hypothetical protein phrog_1385 unknown function unknown function 1 54797 55039
YP_001469236.1 NC_009820_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
YP_001469262.1 NC_009820_p29 hypothetical protein phrog_747 unknown function unknown function 1 26263 26535
YP_001469298.1 NC_009820_p65 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43115 43471
YP_001469299.1 NC_009820_p66 hypothetical protein phrog_67 DNA methyltransferase other 1 43468 44124
YP_001469290.1 NC_009820_p57 hypothetical protein phrog_1333 unknown function unknown function 1 40472 40873
YP_001469285.1 NC_009820_p52 hypothetical protein phrog_780 unknown function unknown function 1 37774 38004
YP_001469321.1 NC_009820_p88 hypothetical protein phrog_6625 unknown function unknown function 1 51661 51951
YP_001469264.1 NC_009820_p31 lysin B phrog_102 endolysin lysis 1 27740 28741
YP_001469292.1 NC_009820_p59 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 41367 41732
YP_001469234.1 NC_009820_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
YP_001469317.1 NC_009820_p84 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 50560 50931
YP_001469271.1 NC_009820_p38 hypothetical protein singleton unknown function unknown function -1 30923 31063
YP_001469335.1 NC_009820_p102 hypothetical protein phrog_3297 kinase other 1 55234 55737
YP_001469331.1 NC_009820_p98 hypothetical protein phrog_3813 unknown function unknown function 1 54235 54402
YP_001469278.1 NC_009820_p45 hypothetical protein phrog_3949 transcriptional repressor transcription regulation -1 34564 35097
YP_001469329.1 NC_009820_p96 hypothetical protein phrog_1869 unknown function unknown function 1 53883 54047
YP_001469270.1 NC_009820_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30722 30814
YP_001469294.1 NC_009820_p61 hypothetical protein phrog_1834 unknown function unknown function 1 41884 42114
YP_001469235.1 NC_009820_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
YP_001469274.1 NC_009820_p41 hypothetical protein phrog_8695 unknown function unknown function -1 31640 31879
YP_001469275.1 NC_009820_p42 hypothetical protein singleton unknown function unknown function -1 31879 32046
YP_001469301.1 NC_009820_p68 hypothetical protein phrog_2704 unknown function unknown function 1 44341 44487
YP_001469253.1 NC_009820_p20 hypothetical protein singleton unknown function unknown function 1 21868 22116
YP_001469318.1 NC_009820_p85 hypothetical protein phrog_7842 unknown function unknown function 1 50918 51091
YP_001469248.1 NC_009820_p15 minor tail protein phrog_106 minor tail protein tail 1 13065 14774
YP_001469241.1 NC_009820_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6446 6778
YP_001469310.1 NC_009820_p77 hypothetical protein phrog_14414 unknown function unknown function 1 48570 48770
YP_001469302.1 NC_009820_p69 hypothetical protein phrog_363 DNA methyltransferase other 1 44484 45269
YP_001469326.1 NC_009820_p93 hypothetical protein phrog_2247 unknown function unknown function 1 52651 52914
YP_001469280.1 NC_009820_p47 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35615 36619
YP_001469237.1 NC_009820_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_001469282.1 NC_009820_p49 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36917 37114
YP_001469295.1 NC_009820_p62 hypothetical protein phrog_11976 unknown function unknown function 1 42111 42257
YP_001469336.1 NC_009820_p103 hypothetical protein phrog_9361 methyltransferase other 1 55743 56279
YP_001469312.1 NC_009820_p79 hypothetical protein phrog_1546 unknown function unknown function 1 48958 49341
YP_001469332.1 NC_009820_p99 hypothetical protein phrog_1186 unknown function unknown function 1 54399 54800
YP_001469303.1 NC_009820_p70 hypothetical protein phrog_647 unknown function unknown function 1 45248 45598
YP_001469257.1 NC_009820_p24 hypothetical protein phrog_2012 minor tail protein tail 1 23682 24320
YP_001469254.1 NC_009820_p21 hypothetical protein phrog_553 minor tail protein tail 1 22143 23033
YP_001469289.1 NC_009820_p56 hypothetical protein phrog_658 unknown function unknown function 1 40125 40472
YP_001469297.1 NC_009820_p64 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 42540 43118
YP_001469272.1 NC_009820_p39 hypothetical protein phrog_5648 unknown function unknown function -1 31050 31391
YP_001469306.1 NC_009820_p73 hypothetical protein phrog_1311 unknown function unknown function 1 47076 47234
YP_001469342.1 NC_009820_p109 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58225 58551
YP_001469327.1 NC_009820_p94 hypothetical protein phrog_1467 unknown function unknown function 1 52911 53552
YP_001469323.1 NC_009820_p90 hypothetical protein phrog_1545 unknown function unknown function 1 52127 52264
YP_001469238.1 NC_009820_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4393 5043
YP_001469263.1 NC_009820_p30 lysin A phrog_700 endolysin lysis 1 26532 27743
YP_001469308.1 NC_009820_p75 hypothetical protein phrog_5956 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47750 48310
YP_001469293.1 NC_009820_p60 hypothetical protein phrog_2078 unknown function unknown function 1 41732 41887
YP_001469304.1 NC_009820_p71 hypothetical protein singleton unknown function unknown function 1 45591 45827
YP_001469245.1 NC_009820_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8579 9515
YP_001469334.1 NC_009820_p101 hypothetical protein phrog_2057 unknown function unknown function 1 55032 55193
YP_001469309.1 NC_009820_p76 hypothetical protein phrog_2080 unknown function unknown function 1 48310 48573
YP_001469296.1 NC_009820_p63 hypothetical protein phrog_2632 unknown function unknown function 1 42283 42543
YP_001469251.1 NC_009820_p18 minor tail protein phrog_346 minor tail protein tail 1 17451 19988
YP_001469250.1 NC_009820_p17 minor tail protein phrog_732 minor tail protein tail 1 16606 17454
YP_001469286.1 NC_009820_p53 hypothetical protein phrog_1797 unknown function unknown function 1 38001 38609
YP_001469277.1 NC_009820_p44 hypothetical protein phrog_1948 unknown function unknown function -1 33843 34301
YP_001469313.1 NC_009820_p80 hypothetical protein phrog_2591 unknown function unknown function 1 49334 49522
YP_001469281.1 NC_009820_p48 hypothetical protein phrog_2025 unknown function unknown function 1 36616 36831
YP_001469325.1 NC_009820_p92 hypothetical protein phrog_2278 unknown function unknown function 1 52487 52654