Genomic map of Staphylococcus phage SAP-2 (NC_009875)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Staphylococcus phage SAP-2, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SAP2.
DB of origin
Host Name
Staphylococcus aureus
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001491538.1 NC_009875_p13 hypothetical protein phrog_17481 minor tail protein tail -1 10838 11371
YP_001491545.1 NC_009875_p20 hypothetical protein phrog_7102 unknown function unknown function -1 17325 17663
YP_001491532.1 NC_009875_p7 hypothetical protein phrog_6099 unknown function unknown function 1 2101 2559
YP_001491544.1 NC_009875_p19 hypothetical protein phrog_6289 unknown function unknown function -1 17130 17312
YP_001491529.1 NC_009875_p4 hypothetical protein phrog_7019 unknown function unknown function 1 1318 1497
YP_001491543.1 NC_009875_p18 major capsid protein phrog_2006 major head protein head and packaging -1 15897 17123
YP_001491537.1 NC_009875_p12 tail protein phrog_2248 tail protein tail -1 8104 9867
YP_001491534.1 NC_009875_p9 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 3870 6155
YP_001491542.1 NC_009875_p17 upper collar protein phrog_2038 upper collar connector connector -1 14900 15649
YP_001491533.1 NC_009875_p8 encapsidation protein phrog_2150 terminase head and packaging 1 2718 3854
YP_001491540.1 NC_009875_p15 minor structural protein phrog_287 minor tail protein tail -1 12195 14138
YP_001491539.1 NC_009875_p14 amidase phrog_635 endolysin lysis -1 11434 12183
YP_001491530.1 NC_009875_p5 hypothetical protein phrog_7529 unknown function unknown function 1 1500 1913
YP_001491536.1 NC_009875_p11 holin phrog_199 holin lysis -1 7679 8101
YP_001491526.1 NC_009875_p1 hypothetical protein phrog_6274 unknown function unknown function 1 343 645
YP_001491527.1 NC_009875_p2 hypothetical protein phrog_6346 unknown function unknown function 1 660 896
YP_001491528.1 NC_009875_p3 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 900 1268
YP_001491541.1 NC_009875_p16 lower collar protein phrog_3225 adaptor Ad4 connector -1 14128 14907
YP_001491531.1 NC_009875_p6 hypothetical protein phrog_8543 unknown function unknown function 1 1906 2073
YP_001491535.1 NC_009875_p10 hypothetical protein phrog_5979 unknown function unknown function -1 6268 7704