Genomic map of Mycobacterium phage U2 (NC_009877)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009877
Definition
Mycobacterium phage U2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
51277
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
63.69
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001491611.1 NC_009877_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31663 31935
YP_001491572.1 NC_009877_p2 hypothetical protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1045
YP_001491617.1 NC_009877_p47 hypothetical protein phrog_2094 unknown function unknown function -1 35483 35815
YP_001491601.1 NC_009877_p31 hypothetical protein phrog_346 minor tail protein tail 1 24238 26091
YP_001491612.1 NC_009877_p42 hypothetical protein phrog_383 unknown function unknown function -1 32219 32575
YP_001491578.1 NC_009877_p8 lysozyme phrog_317 endolysin lysis 1 4186 5619
YP_001491585.1 NC_009877_p15 head structural protein phrog_10 major head protein head and packaging 1 11521 12537
YP_001491591.1 NC_009877_p21 hypothetical protein phrog_117 major tail protein tail 1 14742 15590
YP_001491635.1 NC_009877_p65 hypothetical protein phrog_8167 unknown function unknown function -1 44618 44926
YP_001491618.1 NC_009877_p48 hypothetical protein phrog_499 unknown function unknown function -1 35812 35994
YP_001491610.1 NC_009877_p40 hypothetical protein phrog_1860 unknown function unknown function -1 31571 31717
YP_001491619.1 NC_009877_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35991 36782
YP_001491579.1 NC_009877_p9 hypothetical protein phrog_102 endolysin lysis 1 5609 6577
YP_001491593.1 NC_009877_p23 hypothetical protein phrog_3656 tail assembly chaperone tail 1 16127 16498
YP_001491581.1 NC_009877_p11 terminase phrog_9 terminase large subunit head and packaging 1 6935 8623
YP_001491587.1 NC_009877_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13077 13526
YP_001491592.1 NC_009877_p22 hypothetical protein phrog_330 tail assembly chaperone tail 1 15699 16076
YP_001491596.1 NC_009877_p26 hypothetical protein phrog_1543 minor tail protein tail 1 21057 21239
YP_001491590.1 NC_009877_p20 hypothetical protein phrog_123 tail terminator connector 1 14287 14733
YP_001491622.1 NC_009877_p52 hypothetical protein phrog_1503 unknown function unknown function -1 38635 38814
YP_001491623.1 NC_009877_p53 hypothetical protein phrog_1167 phosphofructokinase other -1 38811 39377
YP_001491620.1 NC_009877_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36775 36915
YP_001491640.1 NC_009877_p70 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46753 47052
YP_001491628.1 NC_009877_p58 endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40633 41121
YP_001491615.1 NC_009877_p45 hypothetical protein phrog_1781 unknown function unknown function -1 34696 34896
YP_001491602.1 NC_009877_p32 beta lactamase phrog_382 minor tail protein with lysin activity tail 1 26165 27562
YP_001491630.1 NC_009877_p60 Glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41592 41888
YP_001491609.1 NC_009877_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31404 31574
YP_001491629.1 NC_009877_p59 hypothetical protein phrog_722 unknown function unknown function -1 41191 41499
YP_001491571.1 NC_009877_p1 hypothetical protein phrog_4649 unknown function unknown function 1 600 752
YP_001491641.1 NC_009877_p71 hypothetical protein phrog_6474 recombination directionality factor integration and excision -1 47045 47284
YP_001491644.1 NC_009877_p74 hypothetical protein phrog_1155 unknown function unknown function -1 47863 48051
YP_001491636.1 NC_009877_p66 hypothetical protein phrog_17362 unknown function unknown function -1 45012 45239
YP_001491631.1 NC_009877_p61 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41888 42709
YP_001491642.1 NC_009877_p72 hypothetical protein phrog_1720 unknown function unknown function -1 47221 47490
YP_001491627.1 NC_009877_p57 hypothetical protein phrog_397 unknown function unknown function -1 40470 40613
YP_001491624.1 NC_009877_p54 DNA topoisomerase-primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39374 39847
YP_001491650.1 NC_009877_p80 hypothetical protein phrog_3414 unknown function unknown function -1 50313 50597
YP_001491582.1 NC_009877_p12 hypothetical protein phrog_104 portal protein head and packaging 1 8620 10062
YP_001491599.1 NC_009877_p29 hypothetical protein phrog_981 minor tail protein tail 1 23522 23869
YP_001491594.1 NC_009877_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 16511 18979
YP_001491632.1 NC_009877_p62 hypothetical protein phrog_520 unknown function unknown function -1 42995 43288
YP_001491584.1 NC_009877_p14 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 10998 11510
YP_001491638.1 NC_009877_p68 hypothetical protein phrog_1809 unknown function unknown function -1 45541 45936
YP_001491647.1 NC_009877_p77 hypothetical protein singleton unknown function unknown function -1 48672 48866
YP_001491625.1 NC_009877_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39744 40259
YP_001491604.1 NC_009877_p34 hypothetical protein singleton unknown function unknown function 1 28072 28176
YP_001491586.1 NC_009877_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12616 13077
YP_001491646.1 NC_009877_p76 hypothetical protein phrog_932 unknown function unknown function -1 48526 48675
YP_001491573.1 NC_009877_p3 hypothetical protein phrog_226 minor tail protein tail 1 1080 1514
YP_001491645.1 NC_009877_p75 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48051 48218
YP_001491626.1 NC_009877_p56 hypothetical protein phrog_1783 unknown function unknown function -1 40238 40399
YP_001491637.1 NC_009877_p67 hypothetical protein phrog_1584 unknown function unknown function -1 45236 45544
YP_001491574.1 NC_009877_p4 Tail fiber-like protein phrog_1197 tail protein tail 1 1882 2952
YP_001491643.1 NC_009877_p73 hypothetical protein phrog_1387 unknown function unknown function -1 47666 47866
YP_001491648.1 NC_009877_p78 DNA methylase phrog_363 DNA methyltransferase other -1 49301 49972
YP_001491600.1 NC_009877_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23893 24213
YP_001491614.1 NC_009877_p44 hypothetical protein phrog_6173 unknown function unknown function -1 34445 34699
YP_001491580.1 NC_009877_p10 hypothetical protein phrog_419 unknown function unknown function 1 6601 6915
YP_001491651.1 NC_009877_p81 hypothetical protein phrog_1387 unknown function unknown function -1 50765 50965
YP_001491603.1 NC_009877_p33 hypothetical protein phrog_644 unknown function unknown function 1 27679 27975
YP_001491621.1 NC_009877_p51 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36920 38638
YP_001491608.1 NC_009877_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31135 31407
YP_001491633.1 NC_009877_p63 hypothetical protein phrog_2184 unknown function unknown function -1 43285 43530
YP_001491588.1 NC_009877_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13583 13888
YP_001491607.1 NC_009877_p37 integrase phrog_95 integrase integration and excision 1 29526 31013
YP_001491583.1 NC_009877_p13 hypothetical protein phrog_193 head maturation protease head and packaging 1 10059 10940
YP_001491595.1 NC_009877_p25 minor tail protein phrog_106 minor tail protein tail 1 19003 21060
YP_001491577.1 NC_009877_p7 hypothetical protein phrog_747 unknown function unknown function 1 3929 4186
YP_001491598.1 NC_009877_p28 hypothetical protein phrog_352 minor tail protein tail 1 23079 23525
YP_001491597.1 NC_009877_p27 minor tail protein phrog_110 minor tail protein tail 1 21239 23041
YP_001491649.1 NC_009877_p79 hypothetical protein phrog_4958 unknown function unknown function -1 49977 50261
YP_001491575.1 NC_009877_p5 hypothetical protein phrog_553 minor tail protein tail 1 2962 3651
YP_001491634.1 NC_009877_p64 RecB family exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43818 44522
YP_001491616.1 NC_009877_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34957 35448
YP_001491576.1 NC_009877_p6 hypothetical protein phrog_1718 tail protein tail 1 3661 3921
YP_001491589.1 NC_009877_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13888 14283
YP_001491613.1 NC_009877_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32596 34422
YP_001491605.1 NC_009877_p35 hypothetical protein phrog_754 minor tail protein tail 1 28173 28955
YP_001491606.1 NC_009877_p36 hypothetical protein phrog_411 unknown function unknown function 1 29076 29360
YP_001491639.1 NC_009877_p69 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 45979 46491