Genomic map of Mycobacterium virus Bethlehem (NC_009878)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_009878
Definition
Mycobacterium phage Bethlehem, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
52250
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
63.24
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001491683.1 NC_009878_p32 beta-lactamase phrog_382 minor tail protein with lysin activity tail 1 27222 28700
YP_001491733.1 NC_009878_p82 hypothetical protein phrog_1387 unknown function unknown function -1 50149 50352
YP_001491655.1 NC_009878_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1685 1996
YP_001491674.1 NC_009878_p23 hypothetical protein phrog_3656 tail assembly chaperone tail 1 17213 17614
YP_001491711.1 NC_009878_p60 hypothetical protein phrog_3647 unknown function unknown function -1 42043 42204
YP_001491689.1 NC_009878_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31790 32197
YP_001491719.1 NC_009878_p68 hypothetical protein phrog_2184 unknown function unknown function -1 44311 44631
YP_001491730.1 NC_009878_p79 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 49415 49714
YP_001491702.1 NC_009878_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37432 37572
YP_001491670.1 NC_009878_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 15003 15398
YP_001491662.1 NC_009878_p11 terminase phrog_9 terminase large subunit head and packaging 1 7260 9971
YP_001491672.1 NC_009878_p21 major tail protein phrog_117 major tail protein tail 1 15857 16705
YP_001491735.1 NC_009878_p84 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 50537 50704
YP_001491659.1 NC_009878_p8 hypothetical protein phrog_747 unknown function unknown function 1 4592 4849
YP_001491729.1 NC_009878_p78 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 48641 49153
YP_001491708.1 NC_009878_p57 hypothetical protein phrog_1783 unknown function unknown function -1 40970 41131
YP_001491717.1 NC_009878_p66 hypothetical protein phrog_780 unknown function unknown function -1 43779 44024
YP_001491727.1 NC_009878_p76 hypothetical protein phrog_1584 unknown function unknown function -1 47886 48203
YP_001491690.1 NC_009878_p39 hypothetical protein phrog_2035 unknown function unknown function -1 32059 32238
YP_001491676.1 NC_009878_p25 minor tail protein phrog_106 minor tail protein tail 1 20121 22178
YP_001491692.1 NC_009878_p41 hypothetical protein phrog_1971 unknown function unknown function -1 32318 32590
YP_001491701.1 NC_009878_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36648 37439
YP_001491671.1 NC_009878_p20 hypothetical protein phrog_123 tail terminator connector 1 15402 15848
YP_001491732.1 NC_009878_p81 hypothetical protein phrog_1720 unknown function unknown function -1 49883 50152
YP_001491666.1 NC_009878_p15 major head protein phrog_10 major head protein head and packaging 1 12869 13870
YP_001491715.1 NC_009878_p64 hypothetical protein phrog_2507 unknown function unknown function -1 43484 43657
YP_001491736.1 NC_009878_p85 hypothetical protein phrog_722 unknown function unknown function -1 50701 50979
YP_001491713.1 NC_009878_p62 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42499 43320
YP_001491710.1 NC_009878_p59 endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41485 41973
YP_001491652.1 NC_009878_p1 hypothetical protein phrog_4649 unknown function unknown function 1 599 751
YP_001491686.1 NC_009878_p35 hypothetical protein phrog_20812 unknown function unknown function 1 29311 29604
YP_001491669.1 NC_009878_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 14641 15003
YP_001491728.1 NC_009878_p77 hypothetical protein phrog_1809 unknown function unknown function -1 48200 48604
YP_001491688.1 NC_009878_p37 integrase phrog_95 integrase integration and excision 1 30167 31669
YP_001491718.1 NC_009878_p67 hypothetical protein phrog_520 unknown function unknown function -1 44021 44314
YP_001491678.1 NC_009878_p27 minor tail protein phrog_110 minor tail protein tail 1 22379 24181
YP_001491658.1 NC_009878_p7 hypothetical protein phrog_1718 tail protein tail 1 4324 4584
YP_001491695.1 NC_009878_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33254 35080
YP_001491726.1 NC_009878_p75 hypothetical protein phrog_5947 unknown function unknown function -1 47722 47889
YP_001491723.1 NC_009878_p72 hypothetical protein phrog_4285 transposase integration and excision -1 45995 46702
YP_001491738.1 NC_009878_p87 hypothetical protein phrog_828 unknown function unknown function -1 51644 51847
YP_001491705.1 NC_009878_p54 hypothetical protein phrog_1167 phosphofructokinase other -1 39468 40112
YP_001491704.1 NC_009878_p53 hypothetical protein phrog_1503 unknown function unknown function -1 39292 39471
YP_001491693.1 NC_009878_p42 hypothetical protein phrog_9812 unknown function unknown function -1 32587 32838
YP_001491700.1 NC_009878_p49 hypothetical protein phrog_499 unknown function unknown function -1 36469 36651
YP_001491687.1 NC_009878_p36 hypothetical protein phrog_411 unknown function unknown function 1 29724 30020
YP_001491722.1 NC_009878_p71 hypothetical protein phrog_8167 unknown function unknown function -1 45644 45979
YP_001491684.1 NC_009878_p33 hypothetical protein phrog_644 unknown function unknown function 1 28793 29113
YP_001491725.1 NC_009878_p74 hypothetical protein phrog_6068 unknown function unknown function -1 47496 47729
YP_001491685.1 NC_009878_p34 hypothetical protein phrog_1560 unknown function unknown function 1 29123 29314
YP_001491661.1 NC_009878_p10 hypothetical protein phrog_102 endolysin lysis 1 6272 7240
YP_001491675.1 NC_009878_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 17626 20097
YP_001491673.1 NC_009878_p22 hypothetical protein phrog_330 tail assembly chaperone tail 1 16707 17192
YP_001491716.1 NC_009878_p65 hypothetical protein phrog_1705 unknown function unknown function -1 43654 43782
YP_001491703.1 NC_009878_p52 hypothetical protein phrog_221 metallo-phosphoesterase other -1 37577 39295
YP_001491682.1 NC_009878_p31 hypothetical protein phrog_346 minor tail protein tail 1 25376 27229
YP_001491653.1 NC_009878_p2 hypothetical protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 748 1044
YP_001491681.1 NC_009878_p30 hypothetical protein phrog_1397 unknown function unknown function 1 25025 25351
YP_001491667.1 NC_009878_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 13956 14192
YP_001491698.1 NC_009878_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35615 36106
YP_001491714.1 NC_009878_p63 hypothetical protein phrog_2864 unknown function unknown function -1 43314 43484
YP_001491734.1 NC_009878_p83 hypothetical protein phrog_1155 unknown function unknown function -1 50349 50537
YP_001491665.1 NC_009878_p14 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 12347 12859
YP_001491663.1 NC_009878_p12 hypothetical protein phrog_104 portal protein head and packaging 1 9968 11410
YP_001491677.1 NC_009878_p26 hypothetical protein phrog_1543 minor tail protein tail 1 22197 22379
YP_001491707.1 NC_009878_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 40581 40991
YP_001491731.1 NC_009878_p80 hypothetical protein phrog_6474 recombination directionality factor integration and excision -1 49707 49886
YP_001491706.1 NC_009878_p55 topoisomerase-primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 40109 40567
YP_001491664.1 NC_009878_p13 hypothetical protein phrog_193 head maturation protease head and packaging 1 11407 12288
YP_001491657.1 NC_009878_p6 hypothetical protein phrog_553 minor tail protein tail 1 3609 4310
YP_001491654.1 NC_009878_p3 hypothetical protein phrog_226 minor tail protein tail 1 1079 1513
YP_001491697.1 NC_009878_p46 hypothetical protein phrog_1781 unknown function unknown function -1 35354 35584
YP_001491724.1 NC_009878_p73 hypothetical protein phrog_4604 unknown function unknown function -1 47038 47499
YP_001491680.1 NC_009878_p29 hypothetical protein phrog_981 minor tail protein tail 1 24660 25007
YP_001491679.1 NC_009878_p28 hypothetical protein phrog_352 minor tail protein tail 1 24217 24663
YP_001491737.1 NC_009878_p86 hypothetical protein phrog_932 unknown function unknown function -1 51000 51149
YP_001491709.1 NC_009878_p58 hypothetical protein phrog_397 unknown function unknown function -1 41202 41462
YP_001491694.1 NC_009878_p43 hypothetical protein phrog_383 unknown function unknown function -1 32874 33257
YP_001491660.1 NC_009878_p9 lysin phrog_317 endolysin lysis 1 4849 6282
YP_001491668.1 NC_009878_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 14192 14641
YP_001491696.1 NC_009878_p45 hypothetical protein phrog_6173 unknown function unknown function -1 35103 35357
YP_001491720.1 NC_009878_p69 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44635 44817
YP_001491712.1 NC_009878_p61 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42233 42502
YP_001491721.1 NC_009878_p70 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44844 45644
YP_001491656.1 NC_009878_p5 hypothetical protein phrog_1197 tail protein tail 1 2529 3599
YP_001491691.1 NC_009878_p40 hypothetical protein phrog_1860 unknown function unknown function -1 32226 32321
YP_001491699.1 NC_009878_p48 hypothetical protein phrog_2094 unknown function unknown function -1 36136 36468