| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_010147 |
Definition |
Staphylococcus phage phiMR11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
43011 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
35.63 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001604098.1 | NC_010147_p8 | hypothetical protein | phrog_1263 | unknown function | unknown function | 1 | 4414 | 4554 |
| YP_001604104.1 | NC_010147_p14 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6618 | 7391 |
| YP_001604105.1 | NC_010147_p15 | single-stranded DNA binding protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7421 | 7939 |
| YP_001604141.1 | NC_010147_p51 | hypothetical protein | phrog_238 | major tail protein | tail | 1 | 24534 | 25094 |
| YP_001604153.1 | NC_010147_p63 | hypothetical protein | phrog_1125 | tail fiber protein | tail | 1 | 38480 | 39652 |
| YP_001604140.1 | NC_010147_p50 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 24110 | 24547 |
| YP_001604112.1 | NC_010147_p22 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 11422 | 11829 |
| YP_001604134.1 | NC_010147_p44 | scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 21271 | 21867 |
| YP_001604126.1 | NC_010147_p36 | hypothetical protein | phrog_555 | unknown function | unknown function | 1 | 15589 | 15825 |
| YP_001604147.1 | NC_010147_p57 | minor structural protein | phrog_287 | minor tail protein | tail | 1 | 31841 | 33739 |
| YP_001604151.1 | NC_010147_p61 | hypothetical protein | phrog_276 | unknown function | unknown function | 1 | 36157 | 36456 |
| YP_001604157.1 | NC_010147_p67 | hypothetical protein | phrog_1529 | unknown function | unknown function | 1 | 42501 | 42707 |
| YP_001604103.1 | NC_010147_p13 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6139 | 6618 |
| YP_001604155.1 | NC_010147_p65 | holin protein | phrog_962 | holin | lysis | 1 | 40109 | 40546 |
| YP_001604143.1 | NC_010147_p53 | hypothetical protein | phrog_1404 | tail protein | tail | 1 | 25671 | 26012 |
| YP_001604156.1 | NC_010147_p66 | endolysin | phrog_635 | endolysin | lysis | 1 | 40527 | 41972 |
| YP_001604131.1 | NC_010147_p41 | large terminase subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 17611 | 18822 |
| YP_001604109.1 | NC_010147_p19 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 9735 | 10976 |
| YP_001604108.1 | NC_010147_p18 | hypothetical protein | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9388 | 9738 |
| YP_001604146.1 | NC_010147_p56 | minor structural protein | phrog_663 | minor head protein | head and packaging | 1 | 29945 | 31828 |
| YP_001604101.1 | NC_010147_p11 | hypothetical protein | phrog_369 | unknown function | unknown function | 1 | 5612 | 5773 |
| YP_001604132.1 | NC_010147_p42 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 18803 | 20254 |
| YP_001604128.1 | NC_010147_p38 | int gene activator | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 16201 | 16374 |
| YP_001604122.1 | NC_010147_p32 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 14402 | 14911 |
| YP_001604117.1 | NC_010147_p27 | hypothetical protein | phrog_1241 | unknown function | unknown function | 1 | 12909 | 13115 |
| YP_001604092.1 | NC_010147_p2 | hypothetical protein | phrog_4037 | unknown function | unknown function | -1 | 1443 | 1946 |
| YP_001604139.1 | NC_010147_p49 | major tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23747 | 24097 |
| YP_001604130.1 | NC_010147_p40 | hypothetical protein | phrog_1595 | terminase small subunit | head and packaging | 1 | 17250 | 17621 |
| YP_001604152.1 | NC_010147_p62 | tail tip protein | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 36593 | 38467 |
| YP_001604091.1 | NC_010147_p1 | integrase | phrog_95 | integrase | integration and excision | -1 | 9 | 1385 |
| YP_001604148.1 | NC_010147_p58 | hypothetical protein | phrog_257 | minor tail protein | tail | 1 | 33739 | 35562 |
| YP_001604127.1 | NC_010147_p37 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 15815 | 16204 |
| YP_001604111.1 | NC_010147_p21 | hypothetical protein | phrog_433 | unknown function | unknown function | 1 | 11191 | 11412 |
| YP_001604095.1 | NC_010147_p5 | transcriptional regulator protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2904 | 3140 |
| YP_001604136.1 | NC_010147_p46 | rho terminator factor | phrog_390 | Arc-like repressor | transcription regulation | 1 | 22729 | 23055 |
| YP_001604096.1 | NC_010147_p6 | anti-repressor protein | phrog_373 | anti-repressor | transcription regulation | 1 | 3154 | 3930 |
| YP_001604099.1 | NC_010147_p9 | hypothetical protein | phrog_3505 | unknown function | unknown function | -1 | 4547 | 4756 |
| YP_001604115.1 | NC_010147_p25 | hypothetical protein | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 12284 | 12646 |
| YP_001604125.1 | NC_010147_p35 | hypothetical protein | phrog_1122 | unknown function | unknown function | 1 | 15393 | 15596 |
| YP_001604106.1 | NC_010147_p16 | hypothetical protein | phrog_398 | unknown function | unknown function | 1 | 7951 | 8625 |
| YP_001604144.1 | NC_010147_p54 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 26015 | 28984 |
| YP_001604135.1 | NC_010147_p45 | major capsid protein | phrog_544 | major head protein | head and packaging | 1 | 21888 | 22712 |
| YP_001604120.1 | NC_010147_p30 | hypothetical protein | phrog_1034 | unknown function | unknown function | 1 | 13860 | 14168 |
| YP_001604137.1 | NC_010147_p47 | hypothetical protein | phrog_1161 | head-tail adaptor | connector | 1 | 23055 | 23369 |
| YP_001604094.1 | NC_010147_p4 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2438 | 2752 |
| YP_001604154.1 | NC_010147_p64 | hypothetical protein | phrog_1262 | unknown function | unknown function | 1 | 39658 | 40053 |
| YP_001604097.1 | NC_010147_p7 | hypothetical protein | phrog_847 | anti-repressor Ant | transcription regulation | 1 | 3956 | 4399 |
| YP_001604121.1 | NC_010147_p31 | hypothetical protein | phrog_266 | unknown function | unknown function | 1 | 14161 | 14409 |
| YP_001604129.1 | NC_010147_p39 | hypothetical protein | phrog_1058 | unknown function | unknown function | 1 | 16375 | 16776 |
| YP_001604142.1 | NC_010147_p52 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 25156 | 25650 |
| YP_001604118.1 | NC_010147_p28 | hypothetical protein | phrog_467 | unknown function | unknown function | 1 | 13118 | 13519 |
| YP_001604110.1 | NC_010147_p20 | hypothetical protein | phrog_3161 | unknown function | unknown function | 1 | 10973 | 11188 |
| YP_001604093.1 | NC_010147_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1964 | 2425 |
| YP_001604113.1 | NC_010147_p23 | hypothetical protein | phrog_299 | unknown function | unknown function | 1 | 11829 | 12014 |
| YP_001604119.1 | NC_010147_p29 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 13516 | 13863 |
| YP_001604116.1 | NC_010147_p26 | hypothetical protein | phrog_258 | virulence associated | other | 1 | 12647 | 12895 |
| YP_001604133.1 | NC_010147_p43 | minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 20211 | 21173 |
| YP_001604138.1 | NC_010147_p48 | head-tail adaptor | phrog_25 | head closure Hc1 | connector | 1 | 23362 | 23697 |
| YP_001604102.1 | NC_010147_p12 | hypothetical protein | phrog_401 | unknown function | unknown function | 1 | 5864 | 6124 |
| YP_001604107.1 | NC_010147_p17 | replication protein | phrog_6493 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 8618 | 9382 |
| YP_001604123.1 | NC_010147_p33 | hypothetical protein | phrog_2027 | unknown function | unknown function | 1 | 14948 | 15193 |
| YP_001604100.1 | NC_010147_p10 | anti-repressor protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4813 | 5502 |
| YP_001604145.1 | NC_010147_p55 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28999 | 29934 |
| YP_001604149.1 | NC_010147_p59 | hypothetical protein | phrog_300 | tail fiber protein | tail | 1 | 35562 | 35939 |
| YP_001604124.1 | NC_010147_p34 | hypothetical protein | phrog_278 | transcriptional regulator | transcription regulation | 1 | 15190 | 15396 |
| YP_001604150.1 | NC_010147_p60 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 35940 | 36116 |
| YP_001604114.1 | NC_010147_p24 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 12015 | 12272 |