Genomic map of Lactobacillus prophage Lj771 (NC_010179)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010179
Definition
Lactobacillus johnsonii prophage Lj771, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
40881
Host Name
Lactobacillus johnsonii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
36.4
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001642388.1 NC_010179_p45 hypothetical protein phrog_579 unknown function unknown function 1 32004 32366
YP_001642387.1 NC_010179_p44 hypothetical protein phrog_400 tail protein tail 1 30979 32025
YP_001642369.1 NC_010179_p27 hypothetical protein phrog_37135 unknown function unknown function 1 15750 15962
YP_001642344.1 NC_010179_p2 hypothetical protein phrog_6148 beta-lactamase-inhibitor protein BLIP moron, auxiliary metabolic gene and host takeover -1 1263 1886
YP_001642389.1 NC_010179_p46 hypothetical protein phrog_120 baseplate wedge subunit tail 1 32323 32739
YP_001642382.1 NC_010179_p39 hypothetical protein phrog_279 tail sheath tail 1 24379 25734
YP_001642377.1 NC_010179_p34 hypothetical protein phrog_132 head-tail adaptor connector 1 22591 22983
YP_001642379.1 NC_010179_p36 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23339 23773
YP_001642361.1 NC_010179_p19 hypothetical protein phrog_834 unknown function unknown function 1 10073 10432
YP_001642349.1 NC_010179_p7 hypothetical protein phrog_16169 unknown function unknown function 1 3956 4285
YP_001642394.1 NC_010179_p51 hypothetical protein phrog_4325 holin lysis 1 38048 38497
YP_001642393.1 NC_010179_p50 hypothetical protein phrog_8791 unknown function unknown function 1 37418 37927
YP_001642385.1 NC_010179_p42 minor tail protein gp26-like protein phrog_1204 tail protein tail 1 26884 30300
YP_001642399.1 NC_010179_p56 MazF-like protein phrog_1936 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover 1 40532 40876
YP_001642353.1 NC_010179_p11 hypothetical protein singleton unknown function unknown function 1 7019 7354
YP_001642360.1 NC_010179_p18 hypothetical protein phrog_22112 unknown function unknown function 1 9771 10013
YP_001642398.1 NC_010179_p55 Maz-like protein phrog_4324 unknown function unknown function 1 40225 40500
YP_001642359.1 NC_010179_p17 hypothetical protein singleton unknown function unknown function 1 9322 9774
YP_001642368.1 NC_010179_p26 adenine methyltransferase phrog_67 DNA methyltransferase other 1 14641 15492
YP_001642347.1 NC_010179_p5 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 2925 3149
YP_001642352.1 NC_010179_p10 DNA replication protein phrog_1163 unknown function unknown function 1 5973 6905
YP_001642390.1 NC_010179_p47 element PBSX protein phrog_6 baseplate wedge subunit tail 1 32736 33887
YP_001642366.1 NC_010179_p24 hypothetical protein phrog_17520 unknown function unknown function 1 11987 12205
YP_001642381.1 NC_010179_p38 hypothetical protein phrog_966 unknown function unknown function 1 24161 24379
YP_001642343.1 NC_010179_p1 integrase XerC-like protein phrog_1 integrase integration and excision -1 3 1190
YP_001642370.1 NC_010179_p28 small terminase subunit phrog_309 terminase small subunit head and packaging 1 16029 16538
YP_001642384.1 NC_010179_p41 hypothetical protein phrog_389 tail protein XkdN-like tail 1 26228 26647
YP_001642362.1 NC_010179_p20 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10496 10957
YP_001642356.1 NC_010179_p14 hypothetical protein phrog_3409 unknown function unknown function 1 8303 8662
YP_001642357.1 NC_010179_p15 hypothetical protein phrog_1945 unknown function unknown function 1 8665 8907
YP_001642354.1 NC_010179_p12 anti-repressor phrog_63 anti-repressor Ant transcription regulation 1 7347 8093
YP_001642358.1 NC_010179_p16 hypothetical protein phrog_3409 unknown function unknown function 1 8963 9319
YP_001642396.1 NC_010179_p53 holin phrog_10813 holin lysis 1 38783 39202
YP_001642380.1 NC_010179_p37 hypothetical protein phrog_525 unknown function unknown function 1 23770 24210
YP_001642355.1 NC_010179_p13 hypothetical protein phrog_17798 unknown function unknown function 1 8093 8302
YP_001642386.1 NC_010179_p43 hypothetical protein phrog_380 endolysin lysis 1 30293 30982
YP_001642383.1 NC_010179_p40 sheath tail protein phrog_365 tail protein tail 1 25746 26216
YP_001642348.1 NC_010179_p6 hypothetical protein phrog_7989 unknown function unknown function 1 3397 3612
YP_001642351.1 NC_010179_p9 recombination protein phrog_10003 recombinase other 1 5151 5963
YP_001642376.1 NC_010179_p33 major head protein phrog_422 major head protein head and packaging 1 21542 22582
YP_001642395.1 NC_010179_p52 hypothetical protein phrog_6664 unknown function unknown function 1 38508 38786
YP_001642392.1 NC_010179_p49 hypothetical protein phrog_12519 unknown function unknown function 1 34450 37368
YP_001642378.1 NC_010179_p35 hypothetical protein phrog_615 head-tail adaptor connector 1 22980 23342
YP_001642371.1 NC_010179_p29 phage terminase large subunit B phrog_2 terminase large subunit head and packaging 1 16501 17730
YP_001642374.1 NC_010179_p31 minor head protein phrog_595 head maturation protease head and packaging 1 19123 20697
YP_001642372.2 NC_010179_p30 portal protein phrog_64 portal protein head and packaging 1 17721 19130
YP_001642375.1 NC_010179_p32 scaffolding protein SbcC-like protein phrog_194 head scaffolding protein head and packaging 1 20952 21509
YP_001642350.1 NC_010179_p8 hypothetical protein phrog_674 unknown function unknown function 1 4285 5145
YP_001642365.1 NC_010179_p23 hypothetical protein phrog_16953 unknown function unknown function 1 11640 11984
YP_001642363.1 NC_010179_p21 hypothetical protein phrog_20359 unknown function unknown function 1 10959 11276
YP_001642345.1 NC_010179_p3 hypothetical protein phrog_87 metallo-protease other -1 1947 2399
YP_001642367.1 NC_010179_p25 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 12381 12884
YP_001642346.1 NC_010179_p4 cl repressor phrog_8 transcriptional regulator transcription regulation -1 2405 2761
YP_001642364.1 NC_010179_p22 hypothetical protein phrog_33595 unknown function unknown function 1 11264 11485
YP_001642391.1 NC_010179_p48 hypothetical protein phrog_521 tail protein tail 1 33877 34437
YP_001642397.1 NC_010179_p54 lysin phrog_291 endolysin lysis 1 39195 40097