Genomic map of Pseudomonas phage LUZ24 (NC_010325)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010325
Definition
Pseudomonas phage LUZ24, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus.
DB of origin
REFSEQ
Length
45625
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
52.24
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001671894.1 NC_010325_p21 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover 1 11793 12677
YP_001671932.1 NC_010325_p59 hypothetical protein phrog_402 unknown function unknown function -1 36715 36927
YP_001671886.1 NC_010325_p13 hypothetical protein singleton unknown function unknown function 1 4979 5131
YP_001671901.1 NC_010325_p28 hypothetical protein phrog_9813 unknown function unknown function 1 16183 16374
YP_001671891.1 NC_010325_p18 hypothetical protein phrog_7631 amidoligase enzyme other 1 8715 9890
YP_001671878.1 NC_010325_p5 hypothetical protein phrog_22965 unknown function unknown function 1 2326 2409
YP_001671910.1 NC_010325_p37 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20375 20929
YP_001671888.1 NC_010325_p15 hypothetical protein phrog_7973 unknown function unknown function 1 6424 7380
YP_001671933.1 NC_010325_p60 phage particle protein phrog_2941 virion structural protein head and packaging -1 36917 37543
YP_001671925.1 NC_010325_p52 phage particle protein phrog_9927 virion structural protein head and packaging -1 31877 32257
YP_001671927.1 NC_010325_p54 hypothetical protein phrog_7642 unknown function unknown function -1 33179 33613
YP_001671928.1 NC_010325_p55 hypothetical protein phrog_8092 unknown function unknown function -1 33610 34299
YP_001671922.1 NC_010325_p49 phage particle protein phrog_8295 virion structural protein head and packaging -1 26138 27025
YP_001671938.1 NC_010325_p65 portal protein phrog_1216 portal protein head and packaging -1 40124 42244
YP_001671941.1 NC_010325_p68 hypothetical protein phrog_51 terminase small subunit head and packaging -1 44122 44580
YP_001671934.1 NC_010325_p61 hypothetical protein phrog_3982 unknown function unknown function -1 37547 37867
YP_001671887.1 NC_010325_p14 hypothetical protein phrog_9504 unknown function unknown function 1 5443 6405
YP_001671940.1 NC_010325_p67 T4-like lyzozyme phrog_7 endolysin lysis -1 43692 44090
YP_001671899.1 NC_010325_p26 hypothetical protein phrog_11010 unknown function unknown function 1 15668 15937
YP_001671885.1 NC_010325_p12 hypothetical protein phrog_8299 unknown function unknown function 1 4164 4823
YP_001671921.1 NC_010325_p48 hypothetical protein phrog_8259 unknown function unknown function -1 25767 26123
YP_001671893.1 NC_010325_p20 hypothetical protein phrog_9335 unknown function unknown function 1 11444 11665
YP_001671918.1 NC_010325_p45 hypothetical protein phrog_9960 unknown function unknown function 1 24935 25153
YP_001671919.1 NC_010325_p46 hypothetical protein phrog_2251 unknown function unknown function 1 25157 25366
YP_001671937.1 NC_010325_p64 hypothetical protein phrog_8161 unknown function unknown function -1 39879 40094
YP_001671930.1 NC_010325_p57 hypothetical protein phrog_5795 tail protein tail -1 35846 36493
YP_001671892.1 NC_010325_p19 L-glutamine-D-fructose-6-phosphate amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other 1 9902 11434
YP_001671911.1 NC_010325_p38 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 20907 21410
YP_001671903.1 NC_010325_p30 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16516 16935
YP_001671908.1 NC_010325_p35 endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 19250 19666
YP_001671935.1 NC_010325_p62 major head protein phrog_1328 major head protein head and packaging -1 37915 38868
YP_001671909.1 NC_010325_p36 DNA polymerase part III phrog_24147 DNA polymerase DNA, RNA and nucleotide metabolism 1 20024 20305
YP_001671912.1 NC_010325_p39 hypothetical protein phrog_8565 unknown function unknown function 1 21436 21666
YP_001671880.1 NC_010325_p7 hypothetical protein phrog_8365 unknown function unknown function 1 2823 3056
YP_001671877.1 NC_010325_p4 hypothetical protein phrog_10887 unknown function unknown function 1 2189 2329
YP_001671936.1 NC_010325_p63 scaffolding protein phrog_3927 head scaffolding protein head and packaging -1 38887 39879
YP_001671897.1 NC_010325_p24 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 13453 15162
YP_001671920.1 NC_010325_p47 hypothetical protein phrog_8402 unknown function unknown function 1 25353 25559
YP_001671874.1 NC_010325_p1 hypothetical protein phrog_26227 unknown function unknown function 1 1020 1190
YP_001671917.1 NC_010325_p44 hypothetical protein phrog_221 metallo-phosphoesterase other 1 24177 24938
YP_001671889.1 NC_010325_p16 hypothetical protein phrog_3815 COOH.NH2 ligase other 1 7377 8177
YP_001671914.1 NC_010325_p41 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 22200 23030
YP_001671881.1 NC_010325_p8 hypothetical protein phrog_14185 unknown function unknown function 1 3058 3333
YP_001671900.1 NC_010325_p27 hypothetical protein phrog_12255 unknown function unknown function 1 15969 16202
YP_001671875.1 NC_010325_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1208 1762
YP_001671902.1 NC_010325_p29 hypothetical protein phrog_9555 unknown function unknown function 1 16364 16525
YP_001671882.1 NC_010325_p9 hypothetical protein phrog_11682 unknown function unknown function 1 3487 3633
YP_001671904.1 NC_010325_p31 holin phrog_7045 holin lysis 1 16932 17216
YP_001671913.1 NC_010325_p40 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21666 22115
YP_001671884.1 NC_010325_p11 hypothetical protein phrog_9861 unknown function unknown function 1 3883 4164
YP_001671895.1 NC_010325_p22 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover 1 12677 13075
YP_001671907.1 NC_010325_p34 DNA polymerase part II phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17999 19180
YP_001671890.1 NC_010325_p17 hypothetical protein phrog_4877 unknown function unknown function 1 8170 8739
YP_001671898.1 NC_010325_p25 DNA polymerase part I phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 15146 15655
YP_001671879.1 NC_010325_p6 hypothetical protein phrog_12073 unknown function unknown function 1 2509 2691
YP_001671906.1 NC_010325_p33 hypothetical protein phrog_9754 unknown function unknown function 1 17801 17998
YP_001671931.1 NC_010325_p58 hypothetical protein phrog_8140 unknown function unknown function -1 36483 36731
YP_001671939.1 NC_010325_p66 terminase large subunit phrog_2 terminase large subunit head and packaging -1 42244 43692
YP_001671876.1 NC_010325_p3 hypothetical protein phrog_9596 unknown function unknown function 1 1974 2192
YP_001671896.1 NC_010325_p23 hypothetical protein phrog_8197 unknown function unknown function 1 13075 13452
YP_001671883.1 NC_010325_p10 hypothetical protein phrog_10516 unknown function unknown function 1 3642 3893
YP_001671924.1 NC_010325_p51 phage particle protein phrog_7725 virion structural protein head and packaging -1 30355 31872
YP_001671916.1 NC_010325_p43 hypothetical protein phrog_14437 endonuclease DNA, RNA and nucleotide metabolism 1 24002 24184
YP_001671929.1 NC_010325_p56 hypothetical protein phrog_3287 virion structural protein head and packaging -1 34296 35837
YP_001671905.1 NC_010325_p32 hypothetical protein phrog_7819 tail length tape measure protein tail 1 17341 17796
YP_001671915.1 NC_010325_p42 hypothetical protein phrog_7967 unknown function unknown function 1 23008 23952
YP_001671923.1 NC_010325_p50 phage particle protein phrog_6958 virion structural protein head and packaging -1 27037 30204
YP_001671926.1 NC_010325_p53 hypothetical protein phrog_7477 unknown function unknown function -1 32257 33198