Genomic map of Pseudomonas phage LUZ19 (NC_010326)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010326
Definition
Pseudomonas phage LUZ19, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus LUZ19.
DB of origin
REFSEQ
Length
43548
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
62.27
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001671944.1 NC_010326_p3 hypothetical protein phrog_7124 unknown function unknown function 1 2041 2268
YP_001671948.1 NC_010326_p7 hypothetical protein phrog_36558 unknown function unknown function 1 3944 4204
YP_001671960.1 NC_010326_p19 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9800 10420
YP_001671988.1 NC_010326_p47 terminase large subunit phrog_38 terminase large subunit head and packaging 1 39253 41058
YP_001671986.1 NC_010326_p45 tail fibre protein phrog_4950 tail fiber protein tail 1 38333 38938
YP_001671976.1 NC_010326_p35 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23796 24764
YP_001671973.1 NC_010326_p32 hypothetical protein phrog_3986 unknown function unknown function 1 21534 22007
YP_001671946.1 NC_010326_p5 hypothetical protein phrog_6951 unknown function unknown function 1 3186 3554
YP_001671947.1 NC_010326_p6 hypothetical protein phrog_7027 unknown function unknown function 1 3541 3765
YP_001671970.1 NC_010326_p29 hypothetical protein phrog_18213 unknown function unknown function 1 18304 18654
YP_001671983.1 NC_010326_p42 phage particle protein phrog_6953 tail fiber protein tail 1 36218 36973
YP_001671968.1 NC_010326_p27 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16884 17930
YP_001671967.1 NC_010326_p26 endonuclease type 7 phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16447 16887
YP_001671952.1 NC_010326_p11 hypothetical protein phrog_5433 unknown function unknown function 1 5095 5511
YP_001671971.1 NC_010326_p30 phage-specific RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18663 21110
YP_001671984.1 NC_010326_p43 tail fibre protein phrog_8874 tail fiber protein tail 1 36973 37431
YP_001671957.1 NC_010326_p16 hypothetical protein phrog_9768 unknown function unknown function 1 7553 7681
YP_001671975.1 NC_010326_p34 head-tail connector protein phrog_449 head-tail adaptor connector 1 22260 23792
YP_001671953.1 NC_010326_p12 hypothetical protein phrog_6915 unknown function unknown function 1 5580 5939
YP_001671945.1 NC_010326_p4 hypothetical protein phrog_1448 unknown function unknown function 1 2279 2818
YP_001671964.1 NC_010326_p23 hypothetical protein phrog_5437 unknown function unknown function 1 14101 14412
YP_001671965.1 NC_010326_p24 hypothetical protein phrog_862 unknown function unknown function 1 14467 15516
YP_001671963.1 NC_010326_p22 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11681 14104
YP_001671949.1 NC_010326_p8 hypothetical protein phrog_4342 unknown function unknown function 1 4204 4494
YP_001671989.1 NC_010326_p48 holin phrog_6597 holin lysis 1 41055 41255
YP_001671950.1 NC_010326_p9 hypothetical protein phrog_24541 unknown function unknown function 1 4494 4724
YP_001671943.1 NC_010326_p2 hypothetical protein phrog_5722 unknown function unknown function 1 1757 2041
YP_001671974.1 NC_010326_p33 hypothetical protein phrog_3112 virion structural protein head and packaging 1 21973 22248
YP_001671979.1 NC_010326_p38 tail tubular protein B phrog_457 tail protein tail 1 26478 28958
YP_001671958.1 NC_010326_p17 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7749 8573
YP_001671969.1 NC_010326_p28 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17940 18311
YP_001671980.1 NC_010326_p39 internal virion protein phrog_805 internal virion protein head and packaging 1 28958 29503
YP_001671942.1 NC_010326_p1 hypothetical protein phrog_20091 unknown function unknown function 1 1616 1744
YP_001671992.1 NC_010326_p51 Rz1 protein phrog_456 Rz-like spanin lysis 1 41909 42109
YP_001671966.1 NC_010326_p25 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15516 16457
YP_001671961.1 NC_010326_p20 DNA Ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10420 11367
YP_001671985.1 NC_010326_p44 tail fibre protein phrog_4176 tail fiber protein tail 1 37424 38329
YP_001671990.1 NC_010326_p49 endolysin phrog_7 endolysin lysis 1 41252 41734
YP_001671993.1 NC_010326_p52 phage particle protein phrog_6908 minor head protein head and packaging 1 42111 42425
YP_001671951.1 NC_010326_p10 hypothetical protein phrog_4342 unknown function unknown function 1 4729 5016
YP_001671994.1 NC_010326_p53 phage particle protein phrog_7171 minor head protein head and packaging 1 42473 42718
YP_001671995.1 NC_010326_p54 hypothetical protein singleton unknown function unknown function 1 42728 42943
YP_001671956.1 NC_010326_p15 hypothetical protein phrog_2563 unknown function unknown function 1 7276 7563
YP_001671955.1 NC_010326_p14 hypothetical protein phrog_9409 unknown function unknown function 1 6831 7250
YP_001671987.1 NC_010326_p46 terminase small subunit phrog_891 terminase small subunit head and packaging 1 38938 39243
YP_001671978.1 NC_010326_p37 tail tubular protein A phrog_446 tail protein tail 1 25921 26475
YP_001671962.1 NC_010326_p21 hypothetical protein phrog_7292 unknown function unknown function 1 11364 11684
YP_001671959.1 NC_010326_p18 DNA_B Helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8617 9810
YP_001671981.1 NC_010326_p40 internal virion protein phrog_2083 internal virion lysozyme motif head and packaging 1 29503 32199
YP_001671972.1 NC_010326_p31 hypothetical protein phrog_6575 unknown function unknown function 1 21283 21534
YP_001671954.1 NC_010326_p13 hypothetical protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5942 6751
YP_001671991.1 NC_010326_p50 Rz protein phrog_214 Rz-like spanin lysis 1 41692 42021
YP_001671977.1 NC_010326_p36 major capsid protein phrog_267 major head protein head and packaging 1 24817 25824
YP_001671982.1 NC_010326_p41 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32203 36216