Genomic map of Azospirillum phage Cd (NC_010355)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010355
Definition
Azospirillum phage Cd, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
62337
Host Name
Azospirillum brasilense
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
63.93
Number of singletons
57
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001686929.1 NC_010355_p88 hypothetical protein singleton unknown function unknown function -1 59534 59770
YP_001686917.1 NC_010355_p76 hypothetical protein singleton unknown function unknown function -1 53776 54219
YP_001686932.1 NC_010355_p91 hypothetical protein singleton unknown function unknown function 1 60512 60745
YP_001686909.1 NC_010355_p68 hypothetical protein singleton unknown function unknown function 1 50476 50682
YP_001686894.1 NC_010355_p53 Phage-related lysozyme phrog_7 endolysin lysis 1 42188 42634
YP_001686920.1 NC_010355_p79 hypothetical protein singleton unknown function unknown function -1 54838 55269
YP_001686926.1 NC_010355_p85 hypothetical protein phrog_7838 exonuclease DNA, RNA and nucleotide metabolism -1 57504 58574
YP_001686887.1 NC_010355_p46 hypothetical protein singleton unknown function unknown function -1 31071 31526
YP_001686888.1 NC_010355_p47 hypothetical protein singleton unknown function unknown function 1 31654 36042
YP_001686877.1 NC_010355_p36 hypothetical protein singleton unknown function unknown function 1 23427 23732
YP_001686860.1 NC_010355_p19 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 11271 11774
YP_001686871.1 NC_010355_p30 prophage protein singleton unknown function unknown function 1 19027 19206
YP_001686885.1 NC_010355_p44 hypothetical protein singleton unknown function unknown function 1 30128 30574
YP_001686918.1 NC_010355_p77 hypothetical protein singleton unknown function unknown function -1 54216 54398
YP_001686855.1 NC_010355_p14 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 8551 8772
YP_001686916.1 NC_010355_p75 hypothetical protein singleton unknown function unknown function -1 53547 53783
YP_001686913.1 NC_010355_p72 integrase phrog_1 integrase integration and excision -1 51755 52642
YP_001686843.1 NC_010355_p2 hypothetical protein singleton unknown function unknown function 1 1165 2259
YP_001686922.1 NC_010355_p81 hypothetical protein singleton unknown function unknown function -1 55901 56251
YP_001686879.1 NC_010355_p38 hypothetical protein phrog_161 head closure Hc1 connector 1 24397 24720
YP_001686933.1 NC_010355_p92 hypothetical protein singleton unknown function unknown function -1 60881 61144
YP_001686907.1 NC_010355_p66 hypothetical protein singleton unknown function unknown function 1 49766 50185
YP_001686854.1 NC_010355_p13 hypothetical protein phrog_757 DNA methyltransferase other 1 7705 8346
YP_001686847.1 NC_010355_p6 hypothetical protein singleton unknown function unknown function 1 4352 5353
YP_001686898.1 NC_010355_p57 Helix-turn-helix motif phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover -1 45069 45392
YP_001686878.1 NC_010355_p37 hypothetical protein phrog_442 head-tail adaptor connector 1 23735 24400
YP_001686912.1 NC_010355_p71 hypothetical protein singleton unknown function unknown function -1 51393 51701
YP_001686875.1 NC_010355_p34 hypothetical protein phrog_5707 unknown function unknown function 1 22706 23131
YP_001686889.1 NC_010355_p48 hypothetical protein phrog_8917 unknown function unknown function 1 36039 37733
YP_001686903.1 NC_010355_p62 hypothetical protein singleton unknown function unknown function -1 47994 48293
YP_001686869.1 NC_010355_p28 prophage protein phrog_83 terminase small subunit head and packaging 1 16756 17223
YP_001686866.1 NC_010355_p25 hypothetical protein singleton unknown function unknown function 1 14873 15136
YP_001686858.1 NC_010355_p17 hypothetical protein singleton unknown function unknown function 1 10402 10803
YP_001686845.1 NC_010355_p4 hypothetical protein singleton unknown function unknown function -1 3116 3667
YP_001686902.1 NC_010355_p61 hypothetical protein singleton unknown function unknown function -1 47659 47997
YP_001686853.1 NC_010355_p12 hypothetical protein singleton unknown function unknown function 1 7148 7708
YP_001686861.1 NC_010355_p20 hypothetical protein phrog_289 GTP-binding domain other 1 11771 12160
YP_001686881.1 NC_010355_p40 hypothetical protein phrog_290 minor tail protein tail 1 25382 26854
YP_001686919.1 NC_010355_p78 hypothetical protein singleton unknown function unknown function -1 54514 54831
YP_001686883.1 NC_010355_p42 hypothetical protein phrog_16336 unknown function unknown function 1 27769 28452
YP_001686935.1 NC_010355_p94 hypothetical protein singleton unknown function unknown function -1 61379 61756
YP_001686886.1 NC_010355_p45 hypothetical protein singleton unknown function unknown function 1 30581 31009
YP_001686873.1 NC_010355_p32 phage head maturation protease phrog_80 head maturation protease head and packaging 1 20558 21247
YP_001686895.1 NC_010355_p54 hypothetical protein singleton unknown function unknown function 1 43206 43628
YP_001686921.1 NC_010355_p80 hypothetical protein singleton unknown function unknown function -1 55293 55862
YP_001686863.1 NC_010355_p22 hypothetical protein singleton unknown function unknown function 1 13712 14257
YP_001686892.1 NC_010355_p51 hypothetical protein singleton unknown function unknown function 1 41140 41826
YP_001686842.1 NC_010355_p1 hypothetical protein phrog_18638 unknown function unknown function 1 43 930
YP_001686899.1 NC_010355_p58 hypothetical protein singleton unknown function unknown function 1 45736 46467
YP_001686924.1 NC_010355_p83 hypothetical protein phrog_15346 unknown function unknown function -1 56576 57121
YP_001686908.1 NC_010355_p67 hypothetical protein singleton unknown function unknown function 1 50213 50446
YP_001686927.1 NC_010355_p86 hypothetical protein phrog_10477 exonuclease DNA, RNA and nucleotide metabolism -1 58528 59328
YP_001686848.1 NC_010355_p7 hypothetical protein singleton unknown function unknown function 1 5353 5793
YP_001686930.1 NC_010355_p89 hypothetical protein singleton unknown function unknown function -1 59861 60028
YP_001686857.1 NC_010355_p16 hypothetical protein singleton unknown function unknown function 1 9737 10420
YP_001686872.1 NC_010355_p31 portal protein phrog_12 portal protein head and packaging 1 19206 20561
YP_001686864.1 NC_010355_p23 hypothetical protein singleton unknown function unknown function 1 14353 14589
YP_001686852.1 NC_010355_p11 epoxidase-like protein phrog_3 transcriptional repressor transcription regulation 1 6685 7041
YP_001686870.1 NC_010355_p29 terminase phrog_9 terminase large subunit head and packaging 1 17261 19012
YP_001686862.1 NC_010355_p21 hypothetical protein singleton unknown function unknown function 1 12672 13472
YP_001686874.1 NC_010355_p33 Phage major capsid protein phrog_10 major head protein head and packaging 1 21260 22636
YP_001686905.1 NC_010355_p64 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 48914 49291
YP_001686891.1 NC_010355_p50 tail fiber protein phrog_2557 virion structural protein head and packaging 1 40549 41130
YP_001686914.1 NC_010355_p73 hypothetical protein singleton unknown function unknown function -1 52653 52919
YP_001686876.1 NC_010355_p35 hypothetical protein phrog_12102 unknown function unknown function 1 23170 23427
YP_001686915.1 NC_010355_p74 hypothetical protein singleton unknown function unknown function 1 52957 53424
YP_001686911.1 NC_010355_p70 hypothetical protein singleton unknown function unknown function -1 51145 51396
YP_001686897.1 NC_010355_p56 hypothetical protein phrog_9685 unknown function unknown function 1 43915 44091
YP_001686849.1 NC_010355_p8 hypothetical protein singleton unknown function unknown function 1 5790 6011
YP_001686880.1 NC_010355_p39 hypothetical protein singleton unknown function unknown function -1 24522 24938
YP_001686844.1 NC_010355_p3 hypothetical protein singleton unknown function unknown function 1 2264 2689
YP_001686884.1 NC_010355_p43 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 29170 30147
YP_001686906.1 NC_010355_p65 hypothetical protein singleton unknown function unknown function 1 49306 49743
YP_001686868.1 NC_010355_p27 HNH endonuclease phrog_2323 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16038 16376
YP_001686856.1 NC_010355_p15 hypothetical protein phrog_9327 primosomal protein DNA, RNA and nucleotide metabolism 1 8986 9861
YP_001686901.1 NC_010355_p60 hypothetical protein singleton unknown function unknown function -1 47402 47662
YP_001686928.1 NC_010355_p87 hypothetical protein singleton unknown function unknown function -1 59325 59528
YP_001686925.1 NC_010355_p84 hypothetical protein singleton unknown function unknown function -1 57085 57507
YP_001686882.1 NC_010355_p41 hypothetical protein phrog_19222 unknown function unknown function 1 26902 27393
YP_001686910.1 NC_010355_p69 hypothetical protein phrog_28248 unknown function unknown function 1 50672 51115
YP_001686893.1 NC_010355_p52 hypothetical protein singleton unknown function unknown function 1 41830 42114
YP_001686934.1 NC_010355_p93 hypothetical protein singleton unknown function unknown function -1 61141 61377
YP_001686851.1 NC_010355_p10 hypothetical protein phrog_4212 unknown function unknown function 1 6427 6675
YP_001686931.1 NC_010355_p90 hypothetical protein phrog_22148 unknown function unknown function -1 60025 60408
YP_001686859.1 NC_010355_p18 hypothetical protein singleton unknown function unknown function 1 10981 11316
YP_001686890.1 NC_010355_p49 hypothetical protein phrog_5939 tail protein tail 1 37792 40539
YP_001686936.1 NC_010355_p95 hypothetical protein singleton unknown function unknown function -1 61839 62234
YP_001686923.1 NC_010355_p82 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 56325 56579
YP_001686867.1 NC_010355_p26 prophage protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 15333 16004
YP_001686896.1 NC_010355_p55 hypothetical protein singleton unknown function unknown function 1 43632 43901
YP_001686900.1 NC_010355_p59 hypothetical protein singleton unknown function unknown function -1 46746 47405
YP_001686850.1 NC_010355_p9 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6011 6430
YP_001686846.1 NC_010355_p5 hypothetical protein singleton unknown function unknown function 1 3961 4110
YP_001686865.1 NC_010355_p24 hypothetical protein singleton unknown function unknown function 1 14586 14876
YP_001686904.1 NC_010355_p63 hypothetical protein singleton unknown function unknown function -1 48286 48921