| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_010355 |
Definition |
Azospirillum phage Cd, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
62337 |
Host Name |
Azospirillum brasilense |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
63.93 |
Number of singletons |
57 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001686929.1 | NC_010355_p88 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59534 | 59770 |
| YP_001686917.1 | NC_010355_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53776 | 54219 |
| YP_001686932.1 | NC_010355_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60512 | 60745 |
| YP_001686909.1 | NC_010355_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50476 | 50682 |
| YP_001686894.1 | NC_010355_p53 | Phage-related lysozyme | phrog_7 | endolysin | lysis | 1 | 42188 | 42634 |
| YP_001686920.1 | NC_010355_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54838 | 55269 |
| YP_001686926.1 | NC_010355_p85 | hypothetical protein | phrog_7838 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 57504 | 58574 |
| YP_001686887.1 | NC_010355_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31071 | 31526 |
| YP_001686888.1 | NC_010355_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31654 | 36042 |
| YP_001686877.1 | NC_010355_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23427 | 23732 |
| YP_001686860.1 | NC_010355_p19 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 11271 | 11774 |
| YP_001686871.1 | NC_010355_p30 | prophage protein | singleton | unknown function | unknown function | 1 | 19027 | 19206 |
| YP_001686885.1 | NC_010355_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30128 | 30574 |
| YP_001686918.1 | NC_010355_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54216 | 54398 |
| YP_001686855.1 | NC_010355_p14 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 8551 | 8772 |
| YP_001686916.1 | NC_010355_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53547 | 53783 |
| YP_001686913.1 | NC_010355_p72 | integrase | phrog_1 | integrase | integration and excision | -1 | 51755 | 52642 |
| YP_001686843.1 | NC_010355_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1165 | 2259 |
| YP_001686922.1 | NC_010355_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55901 | 56251 |
| YP_001686879.1 | NC_010355_p38 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 24397 | 24720 |
| YP_001686933.1 | NC_010355_p92 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60881 | 61144 |
| YP_001686907.1 | NC_010355_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49766 | 50185 |
| YP_001686854.1 | NC_010355_p13 | hypothetical protein | phrog_757 | DNA methyltransferase | other | 1 | 7705 | 8346 |
| YP_001686847.1 | NC_010355_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4352 | 5353 |
| YP_001686898.1 | NC_010355_p57 | Helix-turn-helix motif | phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | -1 | 45069 | 45392 |
| YP_001686878.1 | NC_010355_p37 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 23735 | 24400 |
| YP_001686912.1 | NC_010355_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51393 | 51701 |
| YP_001686875.1 | NC_010355_p34 | hypothetical protein | phrog_5707 | unknown function | unknown function | 1 | 22706 | 23131 |
| YP_001686889.1 | NC_010355_p48 | hypothetical protein | phrog_8917 | unknown function | unknown function | 1 | 36039 | 37733 |
| YP_001686903.1 | NC_010355_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47994 | 48293 |
| YP_001686869.1 | NC_010355_p28 | prophage protein | phrog_83 | terminase small subunit | head and packaging | 1 | 16756 | 17223 |
| YP_001686866.1 | NC_010355_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14873 | 15136 |
| YP_001686858.1 | NC_010355_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10402 | 10803 |
| YP_001686845.1 | NC_010355_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3116 | 3667 |
| YP_001686902.1 | NC_010355_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47659 | 47997 |
| YP_001686853.1 | NC_010355_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7148 | 7708 |
| YP_001686861.1 | NC_010355_p20 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 11771 | 12160 |
| YP_001686881.1 | NC_010355_p40 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 25382 | 26854 |
| YP_001686919.1 | NC_010355_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54514 | 54831 |
| YP_001686883.1 | NC_010355_p42 | hypothetical protein | phrog_16336 | unknown function | unknown function | 1 | 27769 | 28452 |
| YP_001686935.1 | NC_010355_p94 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61379 | 61756 |
| YP_001686886.1 | NC_010355_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30581 | 31009 |
| YP_001686873.1 | NC_010355_p32 | phage head maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 20558 | 21247 |
| YP_001686895.1 | NC_010355_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43206 | 43628 |
| YP_001686921.1 | NC_010355_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55293 | 55862 |
| YP_001686863.1 | NC_010355_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13712 | 14257 |
| YP_001686892.1 | NC_010355_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41140 | 41826 |
| YP_001686842.1 | NC_010355_p1 | hypothetical protein | phrog_18638 | unknown function | unknown function | 1 | 43 | 930 |
| YP_001686899.1 | NC_010355_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45736 | 46467 |
| YP_001686924.1 | NC_010355_p83 | hypothetical protein | phrog_15346 | unknown function | unknown function | -1 | 56576 | 57121 |
| YP_001686908.1 | NC_010355_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50213 | 50446 |
| YP_001686927.1 | NC_010355_p86 | hypothetical protein | phrog_10477 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 58528 | 59328 |
| YP_001686848.1 | NC_010355_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5353 | 5793 |
| YP_001686930.1 | NC_010355_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59861 | 60028 |
| YP_001686857.1 | NC_010355_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9737 | 10420 |
| YP_001686872.1 | NC_010355_p31 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 19206 | 20561 |
| YP_001686864.1 | NC_010355_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14353 | 14589 |
| YP_001686852.1 | NC_010355_p11 | epoxidase-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 6685 | 7041 |
| YP_001686870.1 | NC_010355_p29 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 17261 | 19012 |
| YP_001686862.1 | NC_010355_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12672 | 13472 |
| YP_001686874.1 | NC_010355_p33 | Phage major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 21260 | 22636 |
| YP_001686905.1 | NC_010355_p64 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 48914 | 49291 |
| YP_001686891.1 | NC_010355_p50 | tail fiber protein | phrog_2557 | virion structural protein | head and packaging | 1 | 40549 | 41130 |
| YP_001686914.1 | NC_010355_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52653 | 52919 |
| YP_001686876.1 | NC_010355_p35 | hypothetical protein | phrog_12102 | unknown function | unknown function | 1 | 23170 | 23427 |
| YP_001686915.1 | NC_010355_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52957 | 53424 |
| YP_001686911.1 | NC_010355_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51145 | 51396 |
| YP_001686897.1 | NC_010355_p56 | hypothetical protein | phrog_9685 | unknown function | unknown function | 1 | 43915 | 44091 |
| YP_001686849.1 | NC_010355_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5790 | 6011 |
| YP_001686880.1 | NC_010355_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24522 | 24938 |
| YP_001686844.1 | NC_010355_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2264 | 2689 |
| YP_001686884.1 | NC_010355_p43 | hypothetical protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 29170 | 30147 |
| YP_001686906.1 | NC_010355_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49306 | 49743 |
| YP_001686868.1 | NC_010355_p27 | HNH endonuclease | phrog_2323 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16038 | 16376 |
| YP_001686856.1 | NC_010355_p15 | hypothetical protein | phrog_9327 | primosomal protein | DNA, RNA and nucleotide metabolism | 1 | 8986 | 9861 |
| YP_001686901.1 | NC_010355_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47402 | 47662 |
| YP_001686928.1 | NC_010355_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59325 | 59528 |
| YP_001686925.1 | NC_010355_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57085 | 57507 |
| YP_001686882.1 | NC_010355_p41 | hypothetical protein | phrog_19222 | unknown function | unknown function | 1 | 26902 | 27393 |
| YP_001686910.1 | NC_010355_p69 | hypothetical protein | phrog_28248 | unknown function | unknown function | 1 | 50672 | 51115 |
| YP_001686893.1 | NC_010355_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41830 | 42114 |
| YP_001686934.1 | NC_010355_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61141 | 61377 |
| YP_001686851.1 | NC_010355_p10 | hypothetical protein | phrog_4212 | unknown function | unknown function | 1 | 6427 | 6675 |
| YP_001686931.1 | NC_010355_p90 | hypothetical protein | phrog_22148 | unknown function | unknown function | -1 | 60025 | 60408 |
| YP_001686859.1 | NC_010355_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10981 | 11316 |
| YP_001686890.1 | NC_010355_p49 | hypothetical protein | phrog_5939 | tail protein | tail | 1 | 37792 | 40539 |
| YP_001686936.1 | NC_010355_p95 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61839 | 62234 |
| YP_001686923.1 | NC_010355_p82 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 56325 | 56579 |
| YP_001686867.1 | NC_010355_p26 | prophage protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 15333 | 16004 |
| YP_001686896.1 | NC_010355_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43632 | 43901 |
| YP_001686900.1 | NC_010355_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46746 | 47405 |
| YP_001686850.1 | NC_010355_p9 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6011 | 6430 |
| YP_001686846.1 | NC_010355_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3961 | 4110 |
| YP_001686865.1 | NC_010355_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14586 | 14876 |
| YP_001686904.1 | NC_010355_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48286 | 48921 |