Genomic map of Lactococcus phage asccphi28 (NC_010363)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010363
Definition
Lactococcus phage asccphi28, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
REFSEQ
Length
18762
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
28
%GC
33.65
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001687527.1 NC_010363_p14 tail protein phrog_32033 tail protein tail -1 8089 9777
YP_001687536.1 NC_010363_p23 major capsid protein phrog_33048 major head protein head and packaging -1 15110 16570
YP_001687521.1 NC_010363_p8 hypothetical protein phrog_34581 unknown function unknown function 1 4429 4869
YP_001687540.1 NC_010363_p27 ssDNA-binding phrog_6243 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 17191 17682
YP_001687537.1 NC_010363_p24 hypothetical protein phrog_28457 unknown function unknown function -1 15244 15594
YP_001687516.1 NC_010363_p3 hypothetical protein phrog_30289 unknown function unknown function 1 1069 1281
YP_001687514.1 NC_010363_p1 hypothetical protein phrog_36694 unknown function unknown function 1 614 871
YP_001687531.1 NC_010363_p18 hypothetical protein phrog_17155 unknown function unknown function -1 12128 13081
YP_001687515.1 NC_010363_p2 hypothetical protein phrog_29670 unknown function unknown function 1 861 1061
YP_001687524.1 NC_010363_p11 encapsidation protein phrog_31603 terminase head and packaging 1 5451 6551
YP_001687541.1 NC_010363_p28 hypothetical protein phrog_35920 unknown function unknown function -1 17896 18168
YP_001687519.1 NC_010363_p6 terminal protein phrog_35532 unknown function unknown function 1 1736 2239
YP_001687518.1 NC_010363_p5 hypothetical protein phrog_27956 unknown function unknown function 1 1596 1742
YP_001687533.1 NC_010363_p20 hypothetical protein phrog_35026 unknown function unknown function -1 13176 13322
YP_001687534.1 NC_010363_p21 upper collar phrog_2038 upper collar connector connector -1 14086 14856
YP_001687523.1 NC_010363_p10 holin phrog_38456 holin lysis 1 5081 5467
YP_001687517.1 NC_010363_p4 hypothetical protein phrog_34616 unknown function unknown function 1 1283 1564
YP_001687529.1 NC_010363_p16 hypothetical protein phrog_35466 unknown function unknown function -1 10524 11282
YP_001687525.1 NC_010363_p12 lysin phrog_37633 endolysin lysis 1 6563 7690
YP_001687528.1 NC_010363_p15 lower collar protein phrog_27979 unknown function unknown function -1 9820 10527
YP_001687539.1 NC_010363_p26 hypothetical protein phrog_36210 unknown function unknown function -1 16918 17082
YP_001687535.1 NC_010363_p22 hypothetical protein phrog_35903 unknown function unknown function -1 14856 15056
YP_001687520.1 NC_010363_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2264 4432
YP_001687522.1 NC_010363_p9 hypothetical protein phrog_35781 unknown function unknown function 1 4871 5041
YP_001687526.1 NC_010363_p13 tail protein phrog_35749 tail protein tail -1 7730 8203
YP_001687530.1 NC_010363_p17 hypothetical protein phrog_15030 unknown function unknown function -1 11297 12118
YP_001687532.1 NC_010363_p19 hypothetical protein phrog_3393 endolysin lysis -1 13093 14085
YP_001687538.1 NC_010363_p25 hypothetical protein phrog_37468 unknown function unknown function -1 16573 16914