Genomic map of Lactococcus phage 1706 (NC_010576)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010576
Definition
Lactococcus phage 1706, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
55597
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
33.68
Number of singletons
33
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001828659.1 NC_010576_p11 structural protein phrog_4270 unknown function unknown function 1 9054 9383
YP_001828703.1 NC_010576_p55 helicase phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 38582 42535
YP_001828649.1 NC_010576_p1 hypothetical protein phrog_17502 unknown function unknown function 1 219 668
YP_001828681.1 NC_010576_p33 hypothetical protein singleton unknown function unknown function 1 28199 28480
YP_001828687.1 NC_010576_p39 hypothetical protein singleton unknown function unknown function 1 30005 30259
YP_001828676.1 NC_010576_p28 hypothetical protein singleton unknown function unknown function 1 26002 26244
YP_001828718.1 NC_010576_p70 hypothetical protein phrog_1454 unknown function unknown function 1 49336 49656
YP_001828719.1 NC_010576_p71 structural protein phrog_2428 unknown function unknown function 1 49658 50011
YP_001828656.1 NC_010576_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 3902 5626
YP_001828689.1 NC_010576_p41 hypothetical protein singleton unknown function unknown function 1 30512 30811
YP_001828666.1 NC_010576_p18 tail protein phrog_4372 tail length tape measure protein tail 1 12832 18819
YP_001828698.1 NC_010576_p50 repressor phrog_5105 unknown function unknown function 1 35144 35707
YP_001828694.1 NC_010576_p46 hypothetical protein singleton unknown function unknown function 1 32448 33092
YP_001828692.1 NC_010576_p44 hypothetical protein singleton unknown function unknown function 1 31880 32227
YP_001828672.1 NC_010576_p24 hypothetical protein singleton unknown function unknown function 1 24425 24694
YP_001828673.1 NC_010576_p25 hypothetical protein singleton unknown function unknown function 1 24910 25137
YP_001828711.1 NC_010576_p63 hypothetical protein phrog_236 nucleotide kinase other 1 45387 45743
YP_001828662.1 NC_010576_p14 hypothetical protein phrog_4417 unknown function unknown function 1 10504 11355
YP_001828717.1 NC_010576_p69 hypothetical protein phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 48761 49336
YP_001828722.1 NC_010576_p74 hypothetical protein singleton unknown function unknown function 1 51421 51633
YP_001828695.1 NC_010576_p47 positive regulator of sigma singleton unknown function unknown function 1 33498 34154
YP_001828671.1 NC_010576_p23 hypothetical protein phrog_17080 unknown function unknown function 1 24070 24360
YP_001828700.1 NC_010576_p52 hypothetical protein singleton unknown function unknown function 1 36723 37115
YP_001828710.1 NC_010576_p62 structural protein singleton unknown function unknown function 1 45052 45330
YP_001828724.1 NC_010576_p76 hypothetical protein phrog_4303 unknown function unknown function 1 55175 55435
YP_001828709.1 NC_010576_p61 hypothetical protein singleton unknown function unknown function 1 44786 45052
YP_001828720.1 NC_010576_p72 hypothetical protein phrog_4997 unknown function unknown function 1 50268 50615
YP_001828716.1 NC_010576_p68 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 48435 48734
YP_001828658.1 NC_010576_p10 capsid protein/putative protease phrog_3270 head maturation protease head and packaging 1 6971 9031
YP_001828678.1 NC_010576_p30 hypothetical protein phrog_9516 replication initiation protein DNA, RNA and nucleotide metabolism 1 26665 27153
YP_001828708.1 NC_010576_p60 hypothetical protein singleton unknown function unknown function 1 44210 44755
YP_001828679.1 NC_010576_p31 hypothetical protein singleton unknown function unknown function 1 27119 27646
YP_001828652.1 NC_010576_p4 hypothetical protein phrog_4259 unknown function unknown function 1 1379 1729
YP_001828721.1 NC_010576_p73 amidase phrog_1110 endolysin lysis 1 50643 51413
YP_001828723.1 NC_010576_p75 structural protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 52082 55171
YP_001828675.1 NC_010576_p27 hypothetical protein singleton unknown function unknown function 1 25629 26000
YP_001828691.1 NC_010576_p43 hypothetical protein phrog_4079 unknown function unknown function 1 31216 31863
YP_001828701.1 NC_010576_p53 hypothetical protein phrog_17887 unknown function unknown function 1 37125 38246
YP_001828697.1 NC_010576_p49 hypothetical protein singleton unknown function unknown function 1 34682 35017
YP_001828680.1 NC_010576_p32 hypothetical protein singleton unknown function unknown function 1 27745 28212
YP_001828653.1 NC_010576_p5 hypothetical protein phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1729 2124
YP_001828663.1 NC_010576_p15 hypothetical protein phrog_4282 unknown function unknown function 1 11449 11859
YP_001828683.1 NC_010576_p35 hypothetical protein singleton unknown function unknown function 1 28677 28862
YP_001828650.1 NC_010576_p2 hypothetical protein phrog_17025 unknown function unknown function 1 652 963
YP_001828714.1 NC_010576_p66 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 46697 47176
YP_001828664.1 NC_010576_p16 hypothetical protein phrog_4338 unknown function unknown function 1 11919 12449
YP_001828713.1 NC_010576_p65 hypothetical protein singleton unknown function unknown function 1 45983 46462
YP_001828665.1 NC_010576_p17 structural protein phrog_5 tail completion or Neck1 protein connector 1 12453 12839
YP_001828712.1 NC_010576_p64 transcriptionnal regulator phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 45744 45986
YP_001828707.1 NC_010576_p59 hypothetical protein singleton unknown function unknown function 1 43635 44210
YP_001828657.1 NC_010576_p9 portal protein phrog_12 portal protein head and packaging 1 5627 6970
YP_001828705.1 NC_010576_p57 hypothetical protein singleton unknown function unknown function 1 42944 43306
YP_001828693.1 NC_010576_p45 hypothetical protein singleton unknown function unknown function 1 32193 32435
YP_001828715.1 NC_010576_p67 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 47186 48442
YP_001828685.1 NC_010576_p37 hypothetical protein singleton unknown function unknown function 1 29251 29556
YP_001828651.1 NC_010576_p3 holin phrog_6918 holin lysis 1 964 1368
YP_001828668.1 NC_010576_p20 structural protein phrog_6253 minor tail protein tail 1 20521 22284
YP_001828699.1 NC_010576_p51 hypothetical protein phrog_2152 unknown function unknown function 1 35832 36653
YP_001828655.1 NC_010576_p7 structural protein phrog_14126 unknown function unknown function 1 2501 3889
YP_001828682.1 NC_010576_p34 hypothetical protein singleton unknown function unknown function 1 28464 28676
YP_001828674.1 NC_010576_p26 hypothetical protein singleton unknown function unknown function 1 25380 25592
YP_001828688.1 NC_010576_p40 hypothetical protein phrog_17482 unknown function unknown function 1 30262 30510
YP_001828667.1 NC_010576_p19 tail protein phrog_202 distal tail protein Dit tail 1 18816 20459
YP_001828669.1 NC_010576_p21 structural protein phrog_19556 tail fiber protein; host specificity tail 1 22300 23673
YP_001828677.1 NC_010576_p29 hypothetical protein singleton unknown function unknown function 1 26281 26616
YP_001828660.1 NC_010576_p12 structural protein phrog_78 tail terminator connector 1 9376 9720
YP_001828690.1 NC_010576_p42 hypothetical protein singleton unknown function unknown function 1 30798 31073
YP_001828654.1 NC_010576_p6 structural protein phrog_4247 virion structural protein head and packaging 1 2139 2504
YP_001828702.1 NC_010576_p54 hypothetical protein singleton unknown function unknown function 1 38236 38541
YP_001828686.1 NC_010576_p38 hypothetical protein singleton unknown function unknown function 1 29621 29959
YP_001828704.1 NC_010576_p56 hypothetical protein singleton unknown function unknown function 1 42548 42838
YP_001828696.1 NC_010576_p48 hypothetical protein singleton unknown function unknown function 1 34177 34695
YP_001828670.1 NC_010576_p22 hypothetical protein phrog_8250 unknown function unknown function 1 23685 23921
YP_001828706.1 NC_010576_p58 hypothetical protein phrog_10686 unknown function unknown function 1 43351 43635
YP_001828661.1 NC_010576_p13 major structural protein phrog_2645 major tail protein tail 1 9741 10478
YP_001828684.1 NC_010576_p36 hypothetical protein singleton unknown function unknown function 1 28868 29239