Genomic map of Staphylococcus virus phiMR25 (NC_010808)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_010808
Definition
Staphylococcus phage phiMR25, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
44342
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
34.32
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001949824.1 NC_010808_p26 hypothetical protein phrog_236 nucleotide kinase other 1 12423 12680
YP_001949851.1 NC_010808_p53 major tail protein phrog_238 major tail protein tail 1 24772 25353
YP_001949820.1 NC_010808_p22 hypothetical protein phrog_433 unknown function unknown function 1 11238 11459
YP_001949860.1 NC_010808_p62 hypothetical protein phrog_134 unknown function unknown function 1 36634 36807
YP_001949821.1 NC_010808_p23 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11469 11873
YP_001949808.1 NC_010808_p10 hypothetical protein phrog_989 unknown function unknown function 1 5495 5716
YP_001949844.1 NC_010808_p46 scaffolding protein phrog_172 head scaffolding protein head and packaging 1 21453 22073
YP_001949835.1 NC_010808_p37 hypothetical protein phrog_1616 unknown function unknown function 1 15608 15811
YP_001949814.1 NC_010808_p16 single stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7370 7798
YP_001949867.1 NC_010808_p69 hypothetical protein singleton unknown function unknown function 1 43083 43613
YP_001949833.1 NC_010808_p35 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 15214 15420
YP_001949823.1 NC_010808_p25 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 12064 12423
YP_001949830.1 NC_010808_p32 hypothetical protein phrog_1034 unknown function unknown function 1 14105 14413
YP_001949831.1 NC_010808_p33 hypothetical protein phrog_266 unknown function unknown function 1 14406 14654
YP_001949804.1 NC_010808_p6 Cro-like protein phrog_3 transcriptional repressor transcription regulation 1 3764 3973
YP_001949854.1 NC_010808_p56 tape measure protein phrog_58 tail length tape measure protein tail 1 26171 29635
YP_001949853.1 NC_010808_p55 hypothetical protein phrog_441 tail assembly chaperone tail 1 25810 26154
YP_001949862.1 NC_010808_p64 tail-associated cell wall hydrolase phrog_759 tail associated cell-wall hydrolase other 1 37284 39182
YP_001949857.1 NC_010808_p59 minor structural protein phrog_287 minor tail protein tail 1 32520 34430
YP_001949801.1 NC_010808_p3 hypothetical protein phrog_888 unknown function unknown function -1 2052 2777
YP_001949813.1 NC_010808_p15 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6747 7370
YP_001949818.1 NC_010808_p20 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 10294 11073
YP_001949816.1 NC_010808_p18 hypothetical protein singleton unknown function unknown function 1 8872 9039
YP_001949843.1 NC_010808_p45 hypothetical protein phrog_1431 unknown function unknown function 1 21174 21344
YP_001949855.1 NC_010808_p57 minor tail protein phrog_33 distal tail protein Dit tail 1 29648 30595
YP_001949841.1 NC_010808_p43 portal protein phrog_64 portal protein head and packaging 1 18561 20099
YP_001949832.1 NC_010808_p34 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 14629 15177
YP_001949850.1 NC_010808_p52 hypothetical protein phrog_176 tail terminator connector 1 24370 24753
YP_001949834.1 NC_010808_p36 hypothetical protein phrog_1122 unknown function unknown function 1 15417 15611
YP_001949838.1 NC_010808_p40 int gene activator protein, RinA phrog_36 transcriptional regulator transcription regulation 1 16148 16570
YP_001949825.1 NC_010808_p27 hypothetical protein phrog_987 unknown function unknown function 1 12683 12883
YP_001949840.1 NC_010808_p42 terminase, large subunit phrog_2 terminase large subunit head and packaging 1 17255 18550
YP_001949847.1 NC_010808_p49 hypothetical protein phrog_132 head-tail adaptor connector 1 23380 23712
YP_001949815.1 NC_010808_p17 hypothetical protein phrog_398 unknown function unknown function 1 7812 8486
YP_001949836.1 NC_010808_p38 int gene activator protein, RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 15777 15977
YP_001949837.1 NC_010808_p39 hypothetical protein phrog_1367 unknown function unknown function 1 15978 16124
YP_001949858.1 NC_010808_p60 hypothetical protein phrog_257 minor tail protein tail 1 34430 36253
YP_001949845.1 NC_010808_p47 capsid protein phrog_10 major head protein head and packaging 1 22087 22995
YP_001949806.1 NC_010808_p8 hypothetical protein phrog_1796 unknown function unknown function 1 4779 5003
YP_001949819.1 NC_010808_p21 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 11067 11225
YP_001949817.1 NC_010808_p19 DNA replication protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 9514 10284
YP_001949810.1 NC_010808_p12 transcriptional regulator phrog_11451 CI-like repressor transcription regulation 1 5860 6198
YP_001949829.1 NC_010808_p31 hypothetical protein phrog_98 unknown function unknown function 1 13761 14108
YP_001949799.1 NC_010808_p1 integrase phrog_1 integrase integration and excision -1 83 1129
YP_001949865.1 NC_010808_p67 holin protein phrog_962 holin lysis 1 40824 41261
YP_001949811.1 NC_010808_p13 hypothetical protein phrog_401 unknown function unknown function 1 6263 6523
YP_001949852.1 NC_010808_p54 hypothetical protein phrog_183 tail chaperone protein tail 1 25415 25780
YP_001949839.1 NC_010808_p41 terminase small subunit phrog_51 terminase small subunit head and packaging 1 16683 17252
YP_001949849.1 NC_010808_p51 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24011 24358
YP_001949848.1 NC_010808_p50 hypothetical protein phrog_348 minor head protein head and packaging 1 23709 24011
YP_001949807.1 NC_010808_p9 hypothetical protein phrog_2312 unknown function unknown function 1 5043 5219
YP_001949805.1 NC_010808_p7 anti-repressor protein phrog_130 anti-repressor Ant transcription regulation 1 4011 4778
YP_001949868.1 NC_010808_p70 hypothetical protein singleton unknown function unknown function 1 43610 44032
YP_001949803.1 NC_010808_p5 repressor protein phrog_8 transcriptional regulator transcription regulation -1 3275 3601
YP_001949802.1 NC_010808_p4 hypothetical protein phrog_87 metallo-protease other -1 2795 3253
YP_001949826.1 NC_010808_p28 hypothetical protein phrog_258 virulence associated other 1 12898 13140
YP_001949864.1 NC_010808_p66 hypothetical protein phrog_1262 unknown function unknown function 1 40373 40768
YP_001949861.1 NC_010808_p63 hypothetical protein phrog_276 unknown function unknown function 1 36848 37147
YP_001949859.1 NC_010808_p61 hypothetical protein phrog_300 tail fiber protein tail 1 36253 36630
YP_001949846.1 NC_010808_p48 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 23084 23371
YP_001949800.1 NC_010808_p2 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover -1 1340 2020
YP_001949822.1 NC_010808_p24 hypothetical protein phrog_299 unknown function unknown function 1 11878 12063
YP_001949827.1 NC_010808_p29 hypothetical protein phrog_1241 unknown function unknown function 1 13154 13360
YP_001949863.1 NC_010808_p65 hypothetical protein phrog_1125 tail fiber protein tail 1 39195 40367
YP_001949856.1 NC_010808_p58 minor structural protein phrog_663 minor head protein head and packaging 1 30604 32505
YP_001949866.1 NC_010808_p68 cell wall hydrolase phrog_635 endolysin lysis 1 41242 42687
YP_001949842.1 NC_010808_p44 head morphogenesis protein phrog_115 minor head protein head and packaging 1 20106 21101
YP_001949828.1 NC_010808_p30 hypothetical protein phrog_467 unknown function unknown function 1 13363 13764
YP_001949812.1 NC_010808_p14 hypothetical protein phrog_946 unknown function unknown function 1 6533 6754
YP_001949809.1 NC_010808_p11 hypothetical protein phrog_369 unknown function unknown function 1 5709 5879