| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_010945 |
Definition |
Streptococcus phage PH15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
39136 |
Host Name |
Streptococcus gordonii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
40.5 |
Number of singletons |
11 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_001974329.1 | NC_010945_p3 | hypothetical protein | phrog_9320 | unknown function | unknown function | -1 | 1853 | 2056 |
| YP_001974376.1 | NC_010945_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33806 | 34006 |
| YP_001974336.1 | NC_010945_p10 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4756 | 4944 |
| YP_001974350.1 | NC_010945_p24 | hypothetical protein | phrog_1992 | MazG-like pyrophosphatase | other | 1 | 12545 | 13033 |
| YP_001974338.1 | NC_010945_p12 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5575 | 5859 |
| YP_001974330.1 | NC_010945_p4 | transcriptional repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2058 | 2807 |
| YP_001974374.1 | NC_010945_p48 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 29272 | 29985 |
| YP_001974364.1 | NC_010945_p38 | hypothetical protein | phrog_2724 | unknown function | unknown function | 1 | 21868 | 22110 |
| YP_001974349.1 | NC_010945_p23 | hypothetical protein | phrog_1921 | unknown function | unknown function | 1 | 12160 | 12543 |
| YP_001974366.1 | NC_010945_p40 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 22295 | 22702 |
| YP_001974345.1 | NC_010945_p19 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8334 | 9146 |
| YP_001974386.1 | NC_010945_p60 | hypothetical protein | phrog_12172 | unknown function | unknown function | 1 | 38766 | 39041 |
| YP_001974335.1 | NC_010945_p9 | hypothetical protein | phrog_7409 | unknown function | unknown function | -1 | 4367 | 4591 |
| YP_001974367.1 | NC_010945_p41 | hypothetical protein | phrog_793 | head-tail adaptor | connector | 1 | 22692 | 23042 |
| YP_001974354.1 | NC_010945_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14138 | 14356 |
| YP_001974362.1 | NC_010945_p36 | hypothetical protein | phrog_2303 | head scaffolding protein | head and packaging | 1 | 20395 | 20967 |
| YP_001974368.1 | NC_010945_p42 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 23042 | 23404 |
| YP_001974371.1 | NC_010945_p45 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 24324 | 24788 |
| YP_001974377.1 | NC_010945_p51 | hypothetical protein | phrog_1554 | unknown function | unknown function | 1 | 34003 | 34572 |
| YP_001974380.1 | NC_010945_p54 | endolysin | phrog_998 | endolysin | lysis | 1 | 35170 | 36021 |
| YP_001974384.1 | NC_010945_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37342 | 37449 |
| YP_001974361.1 | NC_010945_p35 | minor capsid protein | phrog_581 | minor head protein | head and packaging | 1 | 19108 | 20253 |
| YP_001974379.1 | NC_010945_p53 | holin | phrog_297 | holin | lysis | 1 | 34886 | 35149 |
| YP_001974339.1 | NC_010945_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5872 | 6180 |
| YP_001974342.1 | NC_010945_p16 | hypothetical protein | phrog_4084 | unknown function | unknown function | 1 | 6417 | 6704 |
| YP_001974348.1 | NC_010945_p22 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 10510 | 11859 |
| YP_001974365.1 | NC_010945_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22103 | 22291 |
| YP_001974385.1 | NC_010945_p59 | hypothetical protein | phrog_1529 | unknown function | unknown function | 1 | 37611 | 37979 |
| YP_001974359.1 | NC_010945_p33 | large subunit of phage terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 16274 | 17581 |
| YP_001974373.1 | NC_010945_p47 | minor tail protein | phrog_1686 | tail length tape measure protein | tail | 1 | 25371 | 29270 |
| YP_001974382.1 | NC_010945_p56 | hypothetical protein | phrog_34334 | unknown function | unknown function | 1 | 36537 | 36824 |
| YP_001974352.1 | NC_010945_p26 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 13290 | 13823 |
| YP_001974369.1 | NC_010945_p43 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 23401 | 23814 |
| YP_001974372.1 | NC_010945_p46 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 24801 | 25367 |
| YP_001974332.1 | NC_010945_p6 | hypothetical protein | phrog_14088 | unknown function | unknown function | 1 | 3098 | 3310 |
| YP_001974351.1 | NC_010945_p25 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 13030 | 13293 |
| YP_001974337.1 | NC_010945_p11 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5042 | 5575 |
| YP_001974358.1 | NC_010945_p32 | small subunit of phage terminase | phrog_51 | terminase small subunit | head and packaging | 1 | 15799 | 16284 |
| YP_001974328.1 | NC_010945_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1263 | 1799 |
| YP_001974370.1 | NC_010945_p44 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 23818 | 24267 |
| YP_001974333.1 | NC_010945_p7 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3286 | 3966 |
| YP_001974353.1 | NC_010945_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13978 | 14151 |
| YP_001974347.1 | NC_010945_p21 | replication protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 9692 | 10513 |
| YP_001974331.1 | NC_010945_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2952 | 3023 |
| YP_001974357.1 | NC_010945_p31 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 14754 | 15194 |
| YP_001974363.1 | NC_010945_p37 | hypothetical protein | phrog_422 | major head protein | head and packaging | 1 | 20982 | 21854 |
| YP_001974344.1 | NC_010945_p18 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7193 | 8320 |
| YP_001974381.1 | NC_010945_p55 | hypothetical protein | phrog_26647 | unknown function | unknown function | 1 | 36208 | 36522 |
| YP_001974356.1 | NC_010945_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14587 | 14772 |
| YP_001974378.1 | NC_010945_p52 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 34585 | 34863 |
| YP_001974341.1 | NC_010945_p15 | hypothetical protein | phrog_4614 | unknown function | unknown function | 1 | 6310 | 6420 |
| YP_001974360.1 | NC_010945_p34 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 17646 | 19103 |
| YP_001974334.1 | NC_010945_p8 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4024 | 4236 |
| YP_001974383.1 | NC_010945_p57 | hypothetical protein | phrog_25567 | unknown function | unknown function | 1 | 36840 | 37151 |
| YP_001974343.1 | NC_010945_p17 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 6685 | 7170 |
| YP_001974340.1 | NC_010945_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6191 | 6313 |
| YP_001974327.1 | NC_010945_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 75 | 1142 |
| YP_001974375.1 | NC_010945_p49 | endopeptidase | phrog_1330 | tail protein | tail | 1 | 29982 | 33791 |
| YP_001974355.1 | NC_010945_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14358 | 14600 |
| YP_001974346.1 | NC_010945_p20 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9167 | 9673 |