Genomic map of Mycobacterium virus Jasper (NC_011020)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011020
Definition
Mycobacterium phage Jasper, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
50968
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.71
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001994605.1 NC_011020_p58 hypothetical protein phrog_1783 unknown function unknown function -1 38570 38737
YP_001994596.1 NC_011020_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34723 35226
YP_001994567.1 NC_011020_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13565 13960
YP_001994630.1 NC_011020_p83 hypothetical protein phrog_932 unknown function unknown function -1 47354 47503
YP_001994555.1 NC_011020_p8 hypothetical protein phrog_1718 tail protein tail 1 3909 4169
YP_001994548.1 NC_011020_p1 helicase phrog_21074 helicase DNA, RNA and nucleotide metabolism 1 609 866
YP_001994590.1 NC_011020_p43 hypothetical protein phrog_1971 unknown function unknown function -1 31574 31849
YP_001994572.1 NC_011020_p25 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16203 18683
YP_001994639.1 NC_011020_p92 hypothetical protein phrog_5419 unknown function unknown function -1 49714 50043
YP_001994595.1 NC_011020_p48 hypothetical protein phrog_1781 unknown function unknown function -1 34450 34680
YP_001994556.1 NC_011020_p9 hypothetical protein phrog_747 unknown function unknown function 1 4177 4434
YP_001994558.1 NC_011020_p11 lysin B phrog_102 endolysin lysis 1 5855 6823
YP_001994579.1 NC_011020_p32 hypothetical protein phrog_346 minor tail protein tail 1 23942 25795
YP_001994553.1 NC_011020_p6 tail fiber-like protein phrog_1197 tail protein tail 1 2119 3189
YP_001994621.1 NC_011020_p74 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44222 44734
YP_001994568.1 NC_011020_p21 hypothetical protein phrog_123 tail terminator connector 1 13964 14410
YP_001994599.1 NC_011020_p52 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36186 36326
YP_001994569.1 NC_011020_p22 major tail protein phrog_117 major tail protein tail 1 14419 15270
YP_001994636.1 NC_011020_p89 hypothetical protein phrog_11359 DNA binding protein DNA, RNA and nucleotide metabolism -1 48673 48915
YP_001994584.1 NC_011020_p37 hypothetical protein phrog_411 unknown function unknown function 1 28791 29087
YP_001994591.1 NC_011020_p44 hypothetical protein phrog_980 unknown function unknown function -1 31846 32091
YP_001994587.1 NC_011020_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31169 31336
YP_001994594.1 NC_011020_p47 hypothetical protein phrog_542 unknown function unknown function -1 34325 34453
YP_001994559.1 NC_011020_p12 terminase phrog_9 terminase large subunit head and packaging 1 6843 8531
YP_001994628.1 NC_011020_p81 hypothetical protein phrog_2093 unknown function unknown function -1 46508 46636
YP_001994578.1 NC_011020_p31 hypothetical protein phrog_1397 unknown function unknown function 1 23570 23917
YP_001994586.1 NC_011020_p39 hypothetical protein phrog_12181 unknown function unknown function -1 30864 31172
YP_001994550.1 NC_011020_p3 hypothetical protein phrog_18329 unknown function unknown function 1 1168 1305
YP_001994611.1 NC_011020_p64 hypothetical protein phrog_2507 unknown function unknown function -1 41141 41314
YP_001994614.1 NC_011020_p67 hypothetical protein phrog_520 unknown function unknown function -1 41666 41959
YP_001994562.1 NC_011020_p15 scaffold phrog_233 head scaffolding protein head and packaging 1 10907 11419
YP_001994577.1 NC_011020_p30 hypothetical protein phrog_981 minor tail protein tail 1 23226 23573
YP_001994620.1 NC_011020_p73 hypothetical protein phrog_1809 unknown function unknown function -1 43785 44180
YP_001994560.1 NC_011020_p13 portal phrog_104 portal protein head and packaging 1 8528 9970
YP_001994625.1 NC_011020_p78 hypothetical protein phrog_1546 unknown function unknown function -1 45758 46159
YP_001994608.1 NC_011020_p61 hypothetical protein phrog_1573 DNA methyltransferase other -1 39571 39951
YP_001994563.1 NC_011020_p16 capsid phrog_10 major head protein head and packaging 1 11429 12439
YP_001994561.1 NC_011020_p14 head assembly protein phrog_193 head maturation protease head and packaging 1 9967 10848
YP_001994631.1 NC_011020_p84 hypothetical protein phrog_4631 unknown function unknown function -1 47500 47817
YP_001994549.1 NC_011020_p2 WhiB/HNH endo phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 863 1171
YP_001994616.1 NC_011020_p69 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42280 42462
YP_001994551.1 NC_011020_p4 hypothetical protein phrog_226 minor tail protein tail 1 1356 1790
YP_001994588.1 NC_011020_p41 hypothetical protein phrog_6835 unknown function unknown function -1 31333 31494
YP_001994575.1 NC_011020_p28 minor tail protein phrog_110 minor tail protein tail 1 20943 22745
YP_001994600.1 NC_011020_p53 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 36326 37093
YP_001994627.1 NC_011020_p80 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 46344 46511
YP_001994610.1 NC_011020_p63 helicase/DnaB phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40320 41141
YP_001994637.1 NC_011020_p90 hypothetical protein phrog_1387 unknown function unknown function -1 48980 49180
YP_001994576.1 NC_011020_p29 hypothetical protein phrog_352 minor tail protein tail 1 22783 23229
YP_001994609.1 NC_011020_p62 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39948 40214
YP_001994597.1 NC_011020_p50 hypothetical protein phrog_499 unknown function unknown function -1 35223 35405
YP_001994566.1 NC_011020_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 13203 13565
YP_001994615.1 NC_011020_p68 hypothetical protein phrog_2184 unknown function unknown function -1 41956 42276
YP_001994603.1 NC_011020_p56 DNA topoisomerase-primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37709 38179
YP_001994607.1 NC_011020_p60 endo VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39013 39501
YP_001994581.1 NC_011020_p34 hypothetical protein phrog_644 unknown function unknown function 1 27281 27682
YP_001994619.1 NC_011020_p72 hypothetical protein phrog_1584 unknown function unknown function -1 43462 43788
YP_001994571.1 NC_011020_p24 tail scaffold protein phrog_330 tail assembly chaperone tail 1 15392 15769
YP_001994601.1 NC_011020_p54 hypothetical protein phrog_1503 unknown function unknown function -1 37090 37260
YP_001994604.1 NC_011020_p57 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38049 38591
YP_001994585.2 NC_011020_p38 serine integrase phrog_95 integrase integration and excision 1 29239 30741
YP_001994612.1 NC_011020_p65 hypothetical protein phrog_1705 unknown function unknown function -1 41311 41442
YP_001994618.1 NC_011020_p71 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42645 43469
YP_001994626.1 NC_011020_p79 hypothetical protein phrog_1155 unknown function unknown function -1 46156 46344
YP_001994592.1 NC_011020_p45 hypothetical protein phrog_383 unknown function unknown function -1 32088 32453
YP_001994593.1 NC_011020_p46 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32455 34284
YP_001994554.1 NC_011020_p7 hypothetical protein phrog_553 minor tail protein tail 1 3199 3897
YP_001994573.1 NC_011020_p26 minor tail protein phrog_106 minor tail protein tail 1 18707 20764
YP_001994552.1 NC_011020_p5 hypothetical protein phrog_26979 unknown function unknown function 1 1923 2102
YP_001994606.1 NC_011020_p59 hypothetical protein phrog_397 unknown function unknown function -1 38734 38994
YP_001994582.1 NC_011020_p35 hypothetical protein phrog_1560 unknown function unknown function 1 27691 27882
YP_001994570.1 NC_011020_p23 tail scaffold protein phrog_393 tail assembly chaperone tail 1 15392 16191
YP_001994598.1 NC_011020_p51 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35402 36193
YP_001994624.1 NC_011020_p77 hypothetical protein phrog_1387 unknown function unknown function -1 45558 45761
YP_001994638.1 NC_011020_p91 hypothetical protein phrog_5542 unknown function unknown function -1 49177 49542
YP_001994589.1 NC_011020_p42 hypothetical protein phrog_1860 unknown function unknown function -1 31482 31568
YP_001994623.1 NC_011020_p76 hypothetical protein phrog_1720 unknown function unknown function -1 45292 45561
YP_001994629.1 NC_011020_p82 DNA methylase phrog_363 DNA methyltransferase other -1 46679 47335
YP_001994565.1 NC_011020_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12754 13203
YP_001994602.1 NC_011020_p55 hypothetical protein phrog_474 phosphofructokinase other -1 37257 37712
YP_001994641.1 NC_011020_p94 hypothetical protein phrog_11359 DNA binding protein DNA, RNA and nucleotide metabolism -1 50400 50624
YP_001994583.1 NC_011020_p36 hypothetical protein phrog_754 minor tail protein tail 1 27882 28670
YP_001994617.1 NC_011020_p70 hypothetical protein phrog_5961 unknown function unknown function -1 42459 42617
YP_001994557.1 NC_011020_p10 lysin A phrog_317 endolysin lysis 1 4444 5865
YP_001994580.1 NC_011020_p33 tail protein phrog_382 minor tail protein with lysin activity tail 1 25788 27272
YP_001994564.1 NC_011020_p17 hypothetical protein phrog_1857 head-tail connector protein connector 1 12518 12754
YP_001994632.1 NC_011020_p85 hypothetical protein phrog_16282 unknown function unknown function -1 47946 48014
YP_001994635.1 NC_011020_p88 hypothetical protein phrog_30972 unknown function unknown function -1 48478 48543
YP_001994633.1 NC_011020_p86 hypothetical protein phrog_2093 unknown function unknown function -1 48072 48251
YP_001994613.1 NC_011020_p66 hypothetical protein phrog_780 unknown function unknown function -1 41439 41666
YP_001994640.1 NC_011020_p93 hypothetical protein phrog_828 unknown function unknown function -1 50142 50345
YP_001994622.1 NC_011020_p75 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 44996 45295
YP_001994634.1 NC_011020_p87 hypothetical protein phrog_9318 unknown function unknown function -1 48248 48418
YP_001994574.1 NC_011020_p27 hypothetical protein phrog_1543 minor tail protein tail 1 20761 20943