Genomic map of Mycobacterium virus Lockley (NC_011021)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011021
Definition
Mycobacterium phage Lockley, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
51478
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
63.42
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001994717.1 NC_011021_p76 hypothetical protein phrog_6510 unknown function unknown function -1 46807 46989
YP_001994675.1 NC_011021_p34 hypothetical protein phrog_644 unknown function unknown function 1 27468 27788
YP_001994711.1 NC_011021_p70 hypothetical protein phrog_1584 unknown function unknown function -1 44455 44778
YP_001994720.1 NC_011021_p79 hypothetical protein phrog_1155 unknown function unknown function -1 47461 47586
YP_001994707.1 NC_011021_p66 hypothetical protein phrog_2184 unknown function unknown function -1 42737 43057
YP_001994655.1 NC_011021_p14 scaffold phrog_233 head scaffolding protein head and packaging 1 11001 11513
YP_001994701.1 NC_011021_p60 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40961 41782
YP_001994696.1 NC_011021_p55 hypothetical protein phrog_1783 unknown function unknown function -1 39025 39189
YP_001994677.1 NC_011021_p36 hypothetical protein phrog_754 minor tail protein tail 1 27986 28873
YP_001994656.1 NC_011021_p15 capsid phrog_10 major head protein head and packaging 1 11523 12521
YP_001994697.1 NC_011021_p56 hypothetical protein phrog_397 unknown function unknown function -1 39257 39400
YP_001994685.1 NC_011021_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32543 34369
YP_001994650.1 NC_011021_p9 lysin A phrog_317 endolysin lysis 1 4538 5959
YP_001994690.1 NC_011021_p49 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36444 36581
YP_001994686.1 NC_011021_p45 hypothetical protein phrog_1781 unknown function unknown function -1 34532 34762
YP_001994643.1 NC_011021_p2 WhiB/HNH endo phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 739 1035
YP_001994727.1 NC_011021_p86 hypothetical protein phrog_16282 unknown function unknown function -1 49017 49085
YP_001994679.1 NC_011021_p38 serine integrase phrog_95 integrase integration and excision 1 29430 30932
YP_001994646.1 NC_011021_p5 tail fiber-like protein phrog_1197 tail protein tail 1 2199 3269
YP_001994700.1 NC_011021_p59 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40580 40855
YP_001994666.1 NC_011021_p25 minor tail protein phrog_106 minor tail protein tail 1 18795 20852
YP_001994669.1 NC_011021_p28 hypothetical protein phrog_352 minor tail protein tail 1 22891 23337
YP_001994705.1 NC_011021_p64 hypothetical protein phrog_1705 unknown function unknown function -1 42328 42450
YP_001994708.1 NC_011021_p67 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43061 43243
YP_001994721.1 NC_011021_p80 hypothetical protein phrog_1155 unknown function unknown function -1 47583 47771
YP_001994703.1 NC_011021_p62 hypothetical protein phrog_2864 unknown function unknown function -1 41991 42158
YP_001994714.1 NC_011021_p73 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 45986 46285
YP_001994651.1 NC_011021_p10 lysin B phrog_102 endolysin lysis 1 5949 6917
YP_001994684.1 NC_011021_p43 hypothetical protein phrog_383 unknown function unknown function -1 32166 32522
YP_001994718.1 NC_011021_p77 hypothetical protein phrog_1387 unknown function unknown function -1 46986 47186
YP_001994702.1 NC_011021_p61 hypothetical protein singleton unknown function unknown function -1 41785 42045
YP_001994658.1 NC_011021_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12843 13292
YP_001994689.1 NC_011021_p48 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35460 36245
YP_001994710.1 NC_011021_p69 hypothetical protein phrog_13709 unknown function unknown function -1 44243 44458
YP_001994652.1 NC_011021_p11 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6937 8625
YP_001994719.1 NC_011021_p78 hypothetical protein phrog_3472 unknown function unknown function -1 47183 47464
YP_001994660.1 NC_011021_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13654 14049
YP_001994648.1 NC_011021_p7 hypothetical protein phrog_1718 tail protein tail 1 4003 4263
YP_001994673.1 NC_011021_p32 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 25896 26933
YP_001994726.1 NC_011021_p85 hypothetical protein phrog_932 unknown function unknown function -1 48736 48888
YP_001994694.1 NC_011021_p53 DNA topoisomerase-primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38164 38634
YP_001994674.1 NC_011021_p33 tail protein phrog_16290 minor tail protein tail 1 26956 27375
YP_001994728.1 NC_011021_p87 DNA methylase phrog_363 DNA methyltransferase other -1 49189 49860
YP_001994693.1 NC_011021_p52 hypothetical protein phrog_1167 phosphofructokinase other -1 37532 38167
YP_001994683.1 NC_011021_p42 hypothetical protein phrog_1971 unknown function unknown function -1 31882 32169
YP_001994659.1 NC_011021_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13292 13654
YP_001994723.1 NC_011021_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48019 48186
YP_001994695.1 NC_011021_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38504 39046
YP_001994662.1 NC_011021_p21 major tail protein phrog_117 major tail protein tail 1 14508 15359
YP_001994670.1 NC_011021_p29 hypothetical protein phrog_981 minor tail protein tail 1 23349 23681
YP_001994725.1 NC_011021_p84 hypothetical protein phrog_9026 unknown function unknown function -1 48308 48520
YP_001994682.1 NC_011021_p41 hypothetical protein phrog_1860 unknown function unknown function -1 31790 31885
YP_001994706.1 NC_011021_p65 hypothetical protein phrog_520 unknown function unknown function -1 42447 42740
YP_001994681.1 NC_011021_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31623 31793
YP_001994645.1 NC_011021_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1675 1905
YP_001994712.1 NC_011021_p71 hypothetical protein phrog_1809 unknown function unknown function -1 44775 45170
YP_001994699.1 NC_011021_p58 hypothetical protein phrog_4334 unknown function unknown function -1 40042 40488
YP_001994715.1 NC_011021_p74 hypothetical protein phrog_16071 unknown function unknown function -1 46278 46640
YP_001994692.1 NC_011021_p51 hypothetical protein phrog_1503 unknown function unknown function -1 37350 37535
YP_001994665.1 NC_011021_p24 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16291 18771
YP_001994698.1 NC_011021_p57 endo VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39419 39907
YP_001994671.1 NC_011021_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23678 24025
YP_001994676.1 NC_011021_p35 hypothetical protein phrog_1560 unknown function unknown function 1 27798 27989
YP_001994713.1 NC_011021_p72 repressor phrog_357 transcriptional repressor transcription regulation -1 45212 45724
YP_001994654.1 NC_011021_p13 head assembly protein phrog_193 head maturation protease head and packaging 1 10061 10942
YP_001994688.1 NC_011021_p47 hypothetical protein phrog_499 unknown function unknown function -1 35281 35463
YP_001994722.1 NC_011021_p81 hypothetical protein phrog_10460 unknown function unknown function -1 47771 48016
YP_001994642.1 NC_011021_p1 hypothetical protein phrog_21009 unknown function unknown function 1 603 758
YP_001994657.1 NC_011021_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12607 12843
YP_001994691.1 NC_011021_p50 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 36586 37353
YP_001994653.1 NC_011021_p12 portal phrog_104 portal protein head and packaging 1 8622 10064
YP_001994680.1 NC_011021_p39 hypothetical protein phrog_12181 unknown function unknown function -1 31054 31623
YP_001994647.1 NC_011021_p6 hypothetical protein phrog_553 minor tail protein tail 1 3279 3989
YP_001994716.1 NC_011021_p75 hypothetical protein singleton unknown function unknown function -1 46637 46810
YP_001994667.1 NC_011021_p26 hypothetical protein phrog_1543 minor tail protein tail 1 20871 21053
YP_001994649.1 NC_011021_p8 hypothetical protein phrog_747 unknown function unknown function 1 4271 4528
YP_001994644.1 NC_011021_p3 hypothetical protein phrog_226 minor tail protein tail 1 1070 1504
YP_001994664.1 NC_011021_p23 tail scaffold protein phrog_330 tail assembly chaperone tail 1 15381 15857
YP_001994687.1 NC_011021_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34793 35284
YP_001994731.1 NC_011021_p90 hypothetical protein phrog_23375 unknown function unknown function -1 50686 50925
YP_001994729.1 NC_011021_p88 hypothetical protein phrog_4958 unknown function unknown function -1 49865 50149
YP_001994709.1 NC_011021_p68 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43428 44246
YP_001994678.1 NC_011021_p37 hypothetical protein phrog_411 unknown function unknown function 1 28994 29278
YP_001994663.1 NC_011021_p22 tail scaffold protein phrog_393 tail assembly chaperone tail 1 15381 16279
YP_001994704.1 NC_011021_p63 hypothetical protein phrog_2507 unknown function unknown function -1 42158 42331
YP_001994724.1 NC_011021_p83 hypothetical protein phrog_2093 unknown function unknown function -1 48183 48311
YP_001994672.1 NC_011021_p31 hypothetical protein phrog_346 minor tail protein tail 1 24050 25903
YP_001994661.1 NC_011021_p20 hypothetical protein phrog_123 tail terminator connector 1 14053 14499
YP_001994668.1 NC_011021_p27 minor tail protein phrog_110 minor tail protein tail 1 21053 22855
YP_001994730.1 NC_011021_p89 hypothetical protein phrog_5419 unknown function unknown function -1 50357 50614