| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011039 |
Definition |
Mycobacterium phage Predator, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Barnyardvirus. |
DB of origin |
REFSEQ |
Length |
70110 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
56.28 |
Number of singletons |
16 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002003392.1 | NC_011039_p34 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 29018 | 30358 |
| YP_002003386.1 | NC_011039_p28 | hypothetical protein | phrog_4336 | tail assembly chaperone | tail | 1 | 16911 | 17432 |
| YP_002003385.1 | NC_011039_p27 | major tail subunit | phrog_4971 | major tail protein | tail | 1 | 15964 | 16815 |
| YP_002003393.1 | NC_011039_p35 | LysA | singleton | unknown function | unknown function | 1 | 30367 | 30519 |
| YP_002003411.1 | NC_011039_p53 | hypothetical protein | phrog_5326 | unknown function | unknown function | 1 | 41850 | 42044 |
| YP_002003372.1 | NC_011039_p14 | hypothetical protein | phrog_12708 | head maturation protease | head and packaging | 1 | 8264 | 9025 |
| YP_002003414.1 | NC_011039_p56 | hypothetical protein | phrog_12472 | unknown function | unknown function | 1 | 43061 | 43378 |
| YP_002003443.1 | NC_011039_p85 | hypothetical protein | phrog_15815 | unknown function | unknown function | 1 | 62335 | 62946 |
| YP_002003413.1 | NC_011039_p55 | hypothetical protein | phrog_14477 | helicase | DNA, RNA and nucleotide metabolism | 1 | 42802 | 43056 |
| YP_002003428.1 | NC_011039_p70 | hypothetical protein | phrog_14381 | unknown function | unknown function | 1 | 51316 | 51663 |
| YP_002003378.1 | NC_011039_p20 | hypothetical protein | phrog_5318 | unknown function | unknown function | 1 | 13151 | 13762 |
| YP_002003412.1 | NC_011039_p54 | hypothetical protein | phrog_7933 | unknown function | unknown function | 1 | 42019 | 42447 |
| YP_002003403.1 | NC_011039_p45 | hypothetical protein | phrog_8253 | unknown function | unknown function | 1 | 37593 | 37862 |
| YP_002003396.1 | NC_011039_p38 | hypothetical protein | phrog_1298 | minor tail protein | tail | 1 | 32067 | 32546 |
| YP_002003434.1 | NC_011039_p76 | DNA pol III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 54791 | 58105 |
| YP_002003387.1 | NC_011039_p29 | hypothetical protein | phrog_6778 | tail assembly chaperone | tail | 1 | 17401 | 17733 |
| YP_002003367.1 | NC_011039_p9 | hypothetical protein | phrog_25887 | unknown function | unknown function | 1 | 6596 | 6766 |
| YP_002003389.1 | NC_011039_p31 | hypothetical protein | phrog_7161 | minor tail protein | tail | 1 | 24112 | 25638 |
| YP_002003394.1 | NC_011039_p36 | hypothetical protein | phrog_1512 | endolysin | lysis | 1 | 30631 | 31587 |
| YP_002003390.1 | NC_011039_p32 | hypothetical protein | phrog_1885 | minor tail protein | tail | 1 | 25635 | 27263 |
| YP_002003408.1 | NC_011039_p50 | hypothetical protein | phrog_17169 | unknown function | unknown function | 1 | 39657 | 40019 |
| YP_002003416.1 | NC_011039_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43970 | 44113 |
| YP_002003371.1 | NC_011039_p13 | hypothetical protein | phrog_16007 | unknown function | unknown function | 1 | 7980 | 8267 |
| YP_002003415.1 | NC_011039_p57 | hypothetical protein | phrog_5307 | unknown function | unknown function | 1 | 43375 | 43941 |
| YP_002003445.1 | NC_011039_p87 | hypothetical protein | phrog_16806 | unknown function | unknown function | 1 | 63486 | 64115 |
| YP_002003407.1 | NC_011039_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39168 | 39626 |
| YP_002003441.1 | NC_011039_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61482 | 61991 |
| YP_002003379.1 | NC_011039_p21 | hypothetical protein | phrog_5274 | unknown function | unknown function | 1 | 13774 | 14148 |
| YP_002003380.1 | NC_011039_p22 | hypothetical protein | phrog_4904 | unknown function | unknown function | 1 | 14150 | 14533 |
| YP_002003426.1 | NC_011039_p68 | hypothetical protein | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 49458 | 50774 |
| YP_002003362.1 | NC_011039_p4 | hypothetical protein | phrog_12672 | unknown function | unknown function | 1 | 2023 | 2271 |
| YP_002003419.1 | NC_011039_p61 | hypothetical protein | phrog_13855 | unknown function | unknown function | 1 | 46304 | 46576 |
| YP_002003369.1 | NC_011039_p11 | hypothetical protein | phrog_24240 | unknown function | unknown function | 1 | 7400 | 7579 |
| YP_002003370.1 | NC_011039_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7579 | 7980 |
| YP_002003424.1 | NC_011039_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48836 | 49084 |
| YP_002003363.1 | NC_011039_p5 | hypothetical protein | phrog_25277 | unknown function | unknown function | 1 | 2470 | 2730 |
| YP_002003384.1 | NC_011039_p26 | hypothetical protein | phrog_5278 | unknown function | unknown function | 1 | 15750 | 15947 |
| YP_002003377.1 | NC_011039_p19 | hypothetical protein | phrog_3990 | major head protein | head and packaging | 1 | 11847 | 13079 |
| YP_002003423.1 | NC_011039_p65 | hypothetical protein | phrog_12020 | unknown function | unknown function | 1 | 48054 | 48638 |
| YP_002003359.1 | NC_011039_p1 | hypothetical protein | phrog_5460 | unknown function | unknown function | 1 | 1 | 348 |
| YP_002003438.1 | NC_011039_p80 | hypothetical protein | phrog_16155 | unknown function | unknown function | 1 | 60198 | 60467 |
| YP_002003450.1 | NC_011039_p92 | primase-polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 66439 | 69402 |
| YP_002003430.1 | NC_011039_p72 | hypothetical protein | phrog_12070 | unknown function | unknown function | 1 | 52784 | 53422 |
| YP_002003383.1 | NC_011039_p25 | hypothetical protein | phrog_12447 | unknown function | unknown function | 1 | 15324 | 15731 |
| YP_002003382.1 | NC_011039_p24 | hypothetical protein | phrog_4995 | unknown function | unknown function | 1 | 14885 | 15343 |
| YP_002003436.1 | NC_011039_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59026 | 59382 |
| YP_002003446.1 | NC_011039_p88 | hypothetical protein | phrog_17566 | unknown function | unknown function | 1 | 64112 | 64573 |
| YP_002003422.1 | NC_011039_p64 | hypothetical protein | phrog_17402 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 47591 | 47914 |
| YP_002003417.1 | NC_011039_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44110 | 44298 |
| YP_002003360.1 | NC_011039_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 354 | 683 |
| YP_002003425.1 | NC_011039_p67 | hypothetical protein | phrog_18085 | unknown function | unknown function | 1 | 49036 | 49476 |
| YP_002003366.1 | NC_011039_p8 | hypothetical protein | phrog_64 | portal protein | head and packaging | 1 | 4868 | 6496 |
| YP_002003418.1 | NC_011039_p60 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 44295 | 46307 |
| YP_002003374.1 | NC_011039_p16 | head protein | phrog_115 | minor head protein | head and packaging | 1 | 9457 | 10386 |
| YP_002003401.1 | NC_011039_p43 | hypothetical protein | phrog_16702 | unknown function | unknown function | 1 | 36928 | 37290 |
| YP_002003435.1 | NC_011039_p77 | hypothetical protein | phrog_17115 | unknown function | unknown function | 1 | 58130 | 59029 |
| YP_002003448.1 | NC_011039_p90 | hypothetical protein | phrog_18727 | unknown function | unknown function | 1 | 65475 | 65984 |
| YP_002003433.1 | NC_011039_p75 | hypothetical protein | phrog_1342 | unknown function | unknown function | 1 | 54337 | 54759 |
| YP_002003361.1 | NC_011039_p3 | hypothetical protein | phrog_10899 | terminase small subunit | head and packaging | 1 | 690 | 2009 |
| YP_002003420.1 | NC_011039_p62 | hypothetical protein | phrog_4392 | unknown function | unknown function | 1 | 46573 | 46911 |
| YP_002003437.1 | NC_011039_p79 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 59366 | 60121 |
| YP_002003439.1 | NC_011039_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60653 | 61114 |
| YP_002003399.1 | NC_011039_p41 | hypothetical protein | phrog_10981 | unknown function | unknown function | 1 | 34274 | 34639 |
| YP_002003365.1 | NC_011039_p7 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 3130 | 4839 |
| YP_002003381.1 | NC_011039_p23 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 14526 | 14885 |
| YP_002003447.1 | NC_011039_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 64539 | 65447 |
| YP_002003388.1 | NC_011039_p30 | tape measure protein | phrog_6435 | tail length tape measure protein | tail | 1 | 17750 | 24115 |
| YP_002003409.1 | NC_011039_p51 | hypothetical protein | phrog_18114 | unknown function | unknown function | 1 | 40021 | 40395 |
| YP_002003440.1 | NC_011039_p82 | hypothetical protein | phrog_17654 | unknown function | unknown function | 1 | 61111 | 61485 |
| YP_002003373.1 | NC_011039_p15 | metal protease | phrog_5556 | tail protein | tail | 1 | 9029 | 9472 |
| YP_002003376.1 | NC_011039_p18 | hypothetical protein | phrog_5042 | unknown function | unknown function | 1 | 11335 | 11802 |
| YP_002003398.1 | NC_011039_p40 | LysB | phrog_102 | endolysin | lysis | 1 | 33027 | 34262 |
| YP_002003421.1 | NC_011039_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46908 | 47594 |
| YP_002003405.1 | NC_011039_p47 | hypothetical protein | phrog_2690 | unknown function | unknown function | 1 | 38369 | 38629 |
| YP_002003427.1 | NC_011039_p69 | hypothetical protein | phrog_8804 | unknown function | unknown function | 1 | 50878 | 51315 |
| YP_002003410.1 | NC_011039_p52 | hypothetical protein | phrog_1221 | unknown function | unknown function | 1 | 40537 | 41748 |
| YP_002003402.1 | NC_011039_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37368 | 37589 |
| YP_002003400.1 | NC_011039_p42 | hypothetical protein | phrog_636 | unknown function | unknown function | 1 | 35912 | 36811 |
| YP_002003368.1 | NC_011039_p10 | hypothetical protein | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 6815 | 7189 |
| YP_002003449.1 | NC_011039_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66213 | 66449 |
| YP_002003429.1 | NC_011039_p71 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 51699 | 52709 |
| YP_002003391.1 | NC_011039_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27263 | 29017 |
| YP_002003397.1 | NC_011039_p39 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32530 | 33021 |
| YP_002003431.1 | NC_011039_p73 | hypothetical protein | phrog_15802 | unknown function | unknown function | 1 | 53748 | 54020 |
| YP_002003406.1 | NC_011039_p48 | hypothetical protein | phrog_17421 | unknown function | unknown function | 1 | 38724 | 39059 |
| YP_002003395.1 | NC_011039_p37 | hypothetical protein | phrog_565 | holin | lysis | 1 | 31599 | 32036 |
| YP_002003404.1 | NC_011039_p46 | hypothetical protein | phrog_1587 | unknown function | unknown function | 1 | 37954 | 38274 |
| YP_002003375.1 | NC_011039_p17 | hypothetical protein | phrog_4866 | head scaffolding protein | head and packaging | 1 | 10412 | 11242 |
| YP_002003432.1 | NC_011039_p74 | hypothetical protein | phrog_15225 | unknown function | unknown function | 1 | 54017 | 54340 |
| YP_002003364.1 | NC_011039_p6 | hypothetical protein | phrog_31040 | unknown function | unknown function | 1 | 2730 | 3125 |
| YP_002003442.1 | NC_011039_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61991 | 62338 |
| YP_002003444.1 | NC_011039_p86 | hypothetical protein | phrog_3848 | unknown function | unknown function | 1 | 63141 | 63479 |