Genomic map of Mycobacterium phage Predator (NC_011039)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011039
Definition
Mycobacterium phage Predator, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Barnyardvirus.
DB of origin
REFSEQ
Length
70110
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
56.28
Number of singletons
16
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002003392.1 NC_011039_p34 hypothetical protein phrog_356 minor tail protein tail 1 29018 30358
YP_002003386.1 NC_011039_p28 hypothetical protein phrog_4336 tail assembly chaperone tail 1 16911 17432
YP_002003385.1 NC_011039_p27 major tail subunit phrog_4971 major tail protein tail 1 15964 16815
YP_002003393.1 NC_011039_p35 LysA singleton unknown function unknown function 1 30367 30519
YP_002003411.1 NC_011039_p53 hypothetical protein phrog_5326 unknown function unknown function 1 41850 42044
YP_002003372.1 NC_011039_p14 hypothetical protein phrog_12708 head maturation protease head and packaging 1 8264 9025
YP_002003414.1 NC_011039_p56 hypothetical protein phrog_12472 unknown function unknown function 1 43061 43378
YP_002003443.1 NC_011039_p85 hypothetical protein phrog_15815 unknown function unknown function 1 62335 62946
YP_002003413.1 NC_011039_p55 hypothetical protein phrog_14477 helicase DNA, RNA and nucleotide metabolism 1 42802 43056
YP_002003428.1 NC_011039_p70 hypothetical protein phrog_14381 unknown function unknown function 1 51316 51663
YP_002003378.1 NC_011039_p20 hypothetical protein phrog_5318 unknown function unknown function 1 13151 13762
YP_002003412.1 NC_011039_p54 hypothetical protein phrog_7933 unknown function unknown function 1 42019 42447
YP_002003403.1 NC_011039_p45 hypothetical protein phrog_8253 unknown function unknown function 1 37593 37862
YP_002003396.1 NC_011039_p38 hypothetical protein phrog_1298 minor tail protein tail 1 32067 32546
YP_002003434.1 NC_011039_p76 DNA pol III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 54791 58105
YP_002003387.1 NC_011039_p29 hypothetical protein phrog_6778 tail assembly chaperone tail 1 17401 17733
YP_002003367.1 NC_011039_p9 hypothetical protein phrog_25887 unknown function unknown function 1 6596 6766
YP_002003389.1 NC_011039_p31 hypothetical protein phrog_7161 minor tail protein tail 1 24112 25638
YP_002003394.1 NC_011039_p36 hypothetical protein phrog_1512 endolysin lysis 1 30631 31587
YP_002003390.1 NC_011039_p32 hypothetical protein phrog_1885 minor tail protein tail 1 25635 27263
YP_002003408.1 NC_011039_p50 hypothetical protein phrog_17169 unknown function unknown function 1 39657 40019
YP_002003416.1 NC_011039_p58 hypothetical protein singleton unknown function unknown function 1 43970 44113
YP_002003371.1 NC_011039_p13 hypothetical protein phrog_16007 unknown function unknown function 1 7980 8267
YP_002003415.1 NC_011039_p57 hypothetical protein phrog_5307 unknown function unknown function 1 43375 43941
YP_002003445.1 NC_011039_p87 hypothetical protein phrog_16806 unknown function unknown function 1 63486 64115
YP_002003407.1 NC_011039_p49 hypothetical protein singleton unknown function unknown function 1 39168 39626
YP_002003441.1 NC_011039_p83 hypothetical protein singleton unknown function unknown function 1 61482 61991
YP_002003379.1 NC_011039_p21 hypothetical protein phrog_5274 unknown function unknown function 1 13774 14148
YP_002003380.1 NC_011039_p22 hypothetical protein phrog_4904 unknown function unknown function 1 14150 14533
YP_002003426.1 NC_011039_p68 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 49458 50774
YP_002003362.1 NC_011039_p4 hypothetical protein phrog_12672 unknown function unknown function 1 2023 2271
YP_002003419.1 NC_011039_p61 hypothetical protein phrog_13855 unknown function unknown function 1 46304 46576
YP_002003369.1 NC_011039_p11 hypothetical protein phrog_24240 unknown function unknown function 1 7400 7579
YP_002003370.1 NC_011039_p12 hypothetical protein singleton unknown function unknown function 1 7579 7980
YP_002003424.1 NC_011039_p66 hypothetical protein singleton unknown function unknown function 1 48836 49084
YP_002003363.1 NC_011039_p5 hypothetical protein phrog_25277 unknown function unknown function 1 2470 2730
YP_002003384.1 NC_011039_p26 hypothetical protein phrog_5278 unknown function unknown function 1 15750 15947
YP_002003377.1 NC_011039_p19 hypothetical protein phrog_3990 major head protein head and packaging 1 11847 13079
YP_002003423.1 NC_011039_p65 hypothetical protein phrog_12020 unknown function unknown function 1 48054 48638
YP_002003359.1 NC_011039_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 348
YP_002003438.1 NC_011039_p80 hypothetical protein phrog_16155 unknown function unknown function 1 60198 60467
YP_002003450.1 NC_011039_p92 primase-polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 66439 69402
YP_002003430.1 NC_011039_p72 hypothetical protein phrog_12070 unknown function unknown function 1 52784 53422
YP_002003383.1 NC_011039_p25 hypothetical protein phrog_12447 unknown function unknown function 1 15324 15731
YP_002003382.1 NC_011039_p24 hypothetical protein phrog_4995 unknown function unknown function 1 14885 15343
YP_002003436.1 NC_011039_p78 hypothetical protein singleton unknown function unknown function 1 59026 59382
YP_002003446.1 NC_011039_p88 hypothetical protein phrog_17566 unknown function unknown function 1 64112 64573
YP_002003422.1 NC_011039_p64 hypothetical protein phrog_17402 membrane protein moron, auxiliary metabolic gene and host takeover 1 47591 47914
YP_002003417.1 NC_011039_p59 hypothetical protein singleton unknown function unknown function 1 44110 44298
YP_002003360.1 NC_011039_p2 hypothetical protein singleton unknown function unknown function 1 354 683
YP_002003425.1 NC_011039_p67 hypothetical protein phrog_18085 unknown function unknown function 1 49036 49476
YP_002003366.1 NC_011039_p8 hypothetical protein phrog_64 portal protein head and packaging 1 4868 6496
YP_002003418.1 NC_011039_p60 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 44295 46307
YP_002003374.1 NC_011039_p16 head protein phrog_115 minor head protein head and packaging 1 9457 10386
YP_002003401.1 NC_011039_p43 hypothetical protein phrog_16702 unknown function unknown function 1 36928 37290
YP_002003435.1 NC_011039_p77 hypothetical protein phrog_17115 unknown function unknown function 1 58130 59029
YP_002003448.1 NC_011039_p90 hypothetical protein phrog_18727 unknown function unknown function 1 65475 65984
YP_002003433.1 NC_011039_p75 hypothetical protein phrog_1342 unknown function unknown function 1 54337 54759
YP_002003361.1 NC_011039_p3 hypothetical protein phrog_10899 terminase small subunit head and packaging 1 690 2009
YP_002003420.1 NC_011039_p62 hypothetical protein phrog_4392 unknown function unknown function 1 46573 46911
YP_002003437.1 NC_011039_p79 hypothetical protein phrog_1981 unknown function unknown function 1 59366 60121
YP_002003439.1 NC_011039_p81 hypothetical protein singleton unknown function unknown function 1 60653 61114
YP_002003399.1 NC_011039_p41 hypothetical protein phrog_10981 unknown function unknown function 1 34274 34639
YP_002003365.1 NC_011039_p7 terminase phrog_2 terminase large subunit head and packaging 1 3130 4839
YP_002003381.1 NC_011039_p23 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 14526 14885
YP_002003447.1 NC_011039_p89 hypothetical protein singleton unknown function unknown function 1 64539 65447
YP_002003388.1 NC_011039_p30 tape measure protein phrog_6435 tail length tape measure protein tail 1 17750 24115
YP_002003409.1 NC_011039_p51 hypothetical protein phrog_18114 unknown function unknown function 1 40021 40395
YP_002003440.1 NC_011039_p82 hypothetical protein phrog_17654 unknown function unknown function 1 61111 61485
YP_002003373.1 NC_011039_p15 metal protease phrog_5556 tail protein tail 1 9029 9472
YP_002003376.1 NC_011039_p18 hypothetical protein phrog_5042 unknown function unknown function 1 11335 11802
YP_002003398.1 NC_011039_p40 LysB phrog_102 endolysin lysis 1 33027 34262
YP_002003421.1 NC_011039_p63 hypothetical protein singleton unknown function unknown function 1 46908 47594
YP_002003405.1 NC_011039_p47 hypothetical protein phrog_2690 unknown function unknown function 1 38369 38629
YP_002003427.1 NC_011039_p69 hypothetical protein phrog_8804 unknown function unknown function 1 50878 51315
YP_002003410.1 NC_011039_p52 hypothetical protein phrog_1221 unknown function unknown function 1 40537 41748
YP_002003402.1 NC_011039_p44 hypothetical protein singleton unknown function unknown function 1 37368 37589
YP_002003400.1 NC_011039_p42 hypothetical protein phrog_636 unknown function unknown function 1 35912 36811
YP_002003368.1 NC_011039_p10 hypothetical protein phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 6815 7189
YP_002003449.1 NC_011039_p91 hypothetical protein singleton unknown function unknown function 1 66213 66449
YP_002003429.1 NC_011039_p71 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 51699 52709
YP_002003391.1 NC_011039_p33 hypothetical protein singleton unknown function unknown function 1 27263 29017
YP_002003397.1 NC_011039_p39 hypothetical protein phrog_726 unknown function unknown function 1 32530 33021
YP_002003431.1 NC_011039_p73 hypothetical protein phrog_15802 unknown function unknown function 1 53748 54020
YP_002003406.1 NC_011039_p48 hypothetical protein phrog_17421 unknown function unknown function 1 38724 39059
YP_002003395.1 NC_011039_p37 hypothetical protein phrog_565 holin lysis 1 31599 32036
YP_002003404.1 NC_011039_p46 hypothetical protein phrog_1587 unknown function unknown function 1 37954 38274
YP_002003375.1 NC_011039_p17 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 10412 11242
YP_002003432.1 NC_011039_p74 hypothetical protein phrog_15225 unknown function unknown function 1 54017 54340
YP_002003364.1 NC_011039_p6 hypothetical protein phrog_31040 unknown function unknown function 1 2730 3125
YP_002003442.1 NC_011039_p84 hypothetical protein singleton unknown function unknown function 1 61991 62338
YP_002003444.1 NC_011039_p86 hypothetical protein phrog_3848 unknown function unknown function 1 63141 63479