| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011040 |
Definition |
Enterobacteria phage BA14, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Berlinvirus; Escherichia virus BA14. |
DB of origin |
REFSEQ |
Length |
39816 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
48.77 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002003452.1 | NC_011040_p2 | gp0.6A | phrog_2385 | unknown function | unknown function | 1 | 1510 | 1707 |
| YP_002003468.1 | NC_011040_p18 | unknown product | phrog_25193 | unknown function | unknown function | 1 | 10901 | 10987 |
| YP_002003451.1 | NC_011040_p1 | gp0.3 | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 1050 | 1508 |
| YP_002003473.1 | NC_011040_p23 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 13264 | 13566 |
| YP_002003487.1 | NC_011040_p37 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 23183 | 23773 |
| YP_002003492.1 | NC_011040_p42 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29607 | 33554 |
| YP_002003479.1 | NC_011040_p29 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 17156 | 18070 |
| YP_002003465.1 | NC_011040_p15 | endonuclease I | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9838 | 10284 |
| YP_002003489.1 | NC_011040_p39 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 26268 | 26681 |
| YP_002003475.1 | NC_011040_p25 | gp2.8 | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14102 | 14536 |
| YP_002003463.1 | NC_011040_p13 | inhibitor of host bacterial RNA polymerase | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8880 | 9071 |
| YP_002003495.1 | NC_011040_p45 | phage lambda Rz-like lysis protein | phrog_1327 | Rz-like spanin | lysis | 1 | 36210 | 36653 |
| YP_002003484.1 | NC_011040_p34 | hypothetical protein | phrog_449 | head-tail adaptor | connector | 1 | 19143 | 20750 |
| YP_002003501.1 | NC_011040_p51 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 39252 | 39407 |
| YP_002003457.1 | NC_011040_p7 | host dGTPase inhibitor | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6526 | 6798 |
| YP_002003477.1 | NC_011040_p27 | host protein H-NS-interacting protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16657 | 16950 |
| YP_002003466.1 | NC_011040_p16 | lysozyme | phrog_822 | amidase | lysis | 1 | 10281 | 10736 |
| YP_002003461.1 | NC_011040_p11 | unknown product | phrog_2585 | nucleotide kinase | other | 1 | 8421 | 8792 |
| YP_002003455.1 | NC_011040_p5 | gp1.1 | phrog_8103 | unknown function | unknown function | 1 | 5728 | 6285 |
| YP_002003480.1 | NC_011040_p30 | gp6.3 | singleton | unknown function | unknown function | 1 | 18043 | 18129 |
| YP_002003486.1 | NC_011040_p36 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 21931 | 22974 |
| YP_002003497.1 | NC_011040_p47 | unknown product | phrog_20446 | unknown function | unknown function | 1 | 36655 | 37212 |
| YP_002003498.1 | NC_011040_p48 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 37228 | 38985 |
| YP_002003483.1 | NC_011040_p33 | tail assembly protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18781 | 19128 |
| YP_002003478.1 | NC_011040_p28 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16950 | 17159 |
| YP_002003462.1 | NC_011040_p12 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 8785 | 8883 |
| YP_002003482.1 | NC_011040_p32 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 18233 | 18478 |
| YP_002003460.1 | NC_011040_p10 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8158 | 8421 |
| YP_002003491.1 | NC_011040_p41 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 27304 | 29583 |
| YP_002003454.1 | NC_011040_p4 | T3/T7-like RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2986 | 5637 |
| YP_002003474.1 | NC_011040_p24 | gp4.7 | phrog_4023 | unknown function | unknown function | 1 | 13656 | 14072 |
| YP_002003476.1 | NC_011040_p26 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 14527 | 16641 |
| YP_002003469.1 | NC_011040_p19 | gp4A | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10998 | 12710 |
| YP_002003470.1 | NC_011040_p20 | hypothetical protein | phrog_5140 | unknown function | unknown function | 1 | 12430 | 12792 |
| YP_002003499.1 | NC_011040_p49 | gp19.2 | phrog_8982 | unknown function | unknown function | 1 | 37937 | 38131 |
| YP_002003472.1 | NC_011040_p22 | unknown product | phrog_6794 | unknown function | unknown function | 1 | 13069 | 13248 |
| YP_002003496.1 | NC_011040_p46 | phage lambda Rz1-like protein | phrog_4306 | Rz-like spanin | lysis | 1 | 36325 | 36579 |
| YP_002003502.1 | NC_011040_p52 | unknown product | phrog_24929 | unknown function | unknown function | 1 | 39380 | 39697 |
| YP_002003459.1 | NC_011040_p9 | gp1.5 | phrog_10145 | unknown function | unknown function | 1 | 8050 | 8130 |
| YP_002003490.1 | NC_011040_p40 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26684 | 27289 |
| YP_002003493.1 | NC_011040_p43 | tail fiber protein | phrog_4242 | tail fiber protein | tail | 1 | 33627 | 35594 |
| YP_002003494.1 | NC_011040_p44 | type II holin | phrog_920 | holin | lysis | 1 | 35643 | 35849 |
| YP_002003464.1 | NC_011040_p14 | single-stranded DNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9140 | 9838 |
| YP_002003453.1 | NC_011040_p3 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 1812 | 2912 |
| YP_002003485.1 | NC_011040_p35 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 20825 | 21736 |
| YP_002003458.1 | NC_011040_p8 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6900 | 7976 |
| YP_002003471.1 | NC_011040_p21 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 12857 | 13069 |
| YP_002003456.1 | NC_011040_p6 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 6377 | 6526 |
| YP_002003467.1 | NC_011040_p17 | unknown product | phrog_25602 | unknown function | unknown function | 1 | 10741 | 10830 |
| YP_002003481.1 | NC_011040_p31 | unknown product | singleton | unknown function | unknown function | 1 | 18190 | 18282 |
| YP_002003488.1 | NC_011040_p38 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 23799 | 26186 |
| YP_002003500.1 | NC_011040_p50 | gp19.2 | singleton | unknown function | unknown function | 1 | 38141 | 38242 |