| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011042 |
Definition |
Enterobacteria phage EcoDS1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus EcoDS1. |
DB of origin |
REFSEQ |
Length |
39252 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
49.94 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002003751.1 | NC_011042_p16 | unknown product | singleton | unknown function | unknown function | 1 | 8449 | 8568 |
| YP_002003759.1 | NC_011042_p24 | gp4.3 | phrog_13039 | unknown function | unknown function | 1 | 12880 | 13044 |
| YP_002003775.1 | NC_011042_p40 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 22985 | 25342 |
| YP_002003786.1 | NC_011042_p51 | unknown product | singleton | unknown function | unknown function | 1 | 36483 | 36644 |
| YP_002003740.1 | NC_011042_p5 | gp0.38 | phrog_7066 | unknown function | unknown function | 1 | 1846 | 2244 |
| YP_002003738.1 | NC_011042_p3 | unknown product | phrog_36394 | unknown function | unknown function | 1 | 1493 | 1636 |
| YP_002003768.1 | NC_011042_p33 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 17628 | 17996 |
| YP_002003787.1 | NC_011042_p52 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 36641 | 38404 |
| YP_002003756.1 | NC_011042_p21 | gp3.5 | phrog_822 | amidase | lysis | 1 | 10413 | 10871 |
| YP_002003746.1 | NC_011042_p11 | unknown product | phrog_6515 | dGTPase inhibitor | other | 1 | 6310 | 6561 |
| YP_002003785.1 | NC_011042_p50 | gp18.7 | phrog_4306 | Rz-like spanin | lysis | 1 | 36140 | 36415 |
| YP_002003754.1 | NC_011042_p19 | hypothetical protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9480 | 9935 |
| YP_002003752.1 | NC_011042_p17 | hypothetical protein | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8565 | 8723 |
| YP_002003749.1 | NC_011042_p14 | gp1.7 | phrog_2585 | nucleotide kinase | other | 1 | 8026 | 8370 |
| YP_002003777.1 | NC_011042_p42 | gp13.5 | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 25877 | 26278 |
| YP_002003776.1 | NC_011042_p41 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 25419 | 25874 |
| YP_002003769.1 | NC_011042_p34 | gp7.3 | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 17989 | 18237 |
| YP_002003781.1 | NC_011042_p46 | hypothetical protein | phrog_14442 | tail protein | tail | 1 | 33109 | 35412 |
| YP_002003760.1 | NC_011042_p25 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13108 | 15279 |
| YP_002003750.1 | NC_011042_p15 | gp1.8 | phrog_1312 | unknown function | unknown function | 1 | 8333 | 8452 |
| YP_002003758.1 | NC_011042_p23 | hypothetical protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11180 | 12868 |
| YP_002003757.1 | NC_011042_p22 | gp3.7 | singleton | unknown function | unknown function | 1 | 10895 | 10990 |
| YP_002003743.1 | NC_011042_p8 | gp1.1 | phrog_8082 | unknown function | unknown function | 1 | 5274 | 5489 |
| YP_002003773.1 | NC_011042_p38 | hypothetical protein | phrog_446 | tail protein | tail | 1 | 22182 | 22748 |
| YP_002003765.1 | NC_011042_p30 | unknown product | phrog_28149 | unknown function | unknown function | 1 | 16847 | 16939 |
| YP_002003739.1 | NC_011042_p4 | gp0.6 | phrog_2385 | unknown function | unknown function | 1 | 1649 | 1846 |
| YP_002003753.1 | NC_011042_p18 | gp2.5 | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8782 | 9480 |
| YP_002003780.1 | NC_011042_p45 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29157 | 33044 |
| YP_002003771.1 | NC_011042_p36 | hypothetical protein | phrog_1052 | head assembly | head and packaging | 1 | 19933 | 20817 |
| YP_002003770.1 | NC_011042_p35 | hypothetical protein | phrog_449 | head-tail adaptor | connector | 1 | 18249 | 19817 |
| YP_002003761.1 | NC_011042_p26 | gp5.5 | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 15279 | 15578 |
| YP_002003755.1 | NC_011042_p20 | gp3.2 | phrog_16385 | unknown function | unknown function | 1 | 9932 | 10423 |
| YP_002003764.1 | NC_011042_p29 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15999 | 16865 |
| YP_002003762.1 | NC_011042_p27 | gp5.7 | phrog_1334 | unknown function | unknown function | 1 | 15575 | 15784 |
| YP_002003778.1 | NC_011042_p43 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 26271 | 26858 |
| YP_002003744.1 | NC_011042_p9 | gp1.05 | phrog_8103 | unknown function | unknown function | 1 | 5568 | 6038 |
| YP_002003766.1 | NC_011042_p31 | unknown product | phrog_1447 | unknown function | unknown function | 1 | 17076 | 17348 |
| YP_002003779.1 | NC_011042_p44 | hypothetical protein | phrog_1339 | internal virion protein | head and packaging | 1 | 26870 | 29152 |
| YP_002003763.1 | NC_011042_p28 | unknown product | phrog_2251 | unknown function | unknown function | 1 | 15781 | 15999 |
| YP_002003783.1 | NC_011042_p48 | hypothetical protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35666 | 35929 |
| YP_002003748.1 | NC_011042_p13 | gp1.6 | phrog_1777 | unknown function | unknown function | 1 | 7772 | 8026 |
| YP_002003788.1 | NC_011042_p53 | gp19.5 | phrog_2193 | unknown function | unknown function | 1 | 38702 | 38860 |
| YP_002003772.1 | NC_011042_p37 | gp10A | phrog_267 | major head protein | head and packaging | 1 | 20944 | 21987 |
| YP_002003745.1 | NC_011042_p10 | gp1.1 | phrog_4383 | unknown function | unknown function | 1 | 6127 | 6306 |
| YP_002003747.1 | NC_011042_p12 | gp1.3 | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6561 | 7658 |
| YP_002003742.1 | NC_011042_p7 | unknown product | phrog_28104 | unknown function | unknown function | 1 | 5033 | 5263 |
| YP_002003737.1 | NC_011042_p2 | gp0.35 | phrog_5058 | unknown function | unknown function | 1 | 1322 | 1474 |
| YP_002003782.1 | NC_011042_p47 | gp17.5 | phrog_920 | holin | lysis | 1 | 35475 | 35669 |
| YP_002003774.1 | NC_011042_p39 | unknown product | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 22748 | 22975 |
| YP_002003736.1 | NC_011042_p1 | gp0.3 | phrog_2568 | ocr-like anti-restriction | moron, auxiliary metabolic gene and host takeover | 1 | 990 | 1322 |
| YP_002003784.1 | NC_011042_p49 | gp18.5 | phrog_1327 | Rz-like spanin | lysis | 1 | 36040 | 36486 |
| YP_002003741.1 | NC_011042_p6 | hypothetical protein | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2336 | 5017 |
| YP_002003767.1 | NC_011042_p32 | gp6.7 | phrog_1391 | unknown function | unknown function | 1 | 17363 | 17587 |