Genomic map of Enterobacteria phage EcoDS1 (NC_011042)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011042
Definition
Enterobacteria phage EcoDS1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus EcoDS1.
DB of origin
REFSEQ
Length
39252
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
49.94
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002003751.1 NC_011042_p16 unknown product singleton unknown function unknown function 1 8449 8568
YP_002003759.1 NC_011042_p24 gp4.3 phrog_13039 unknown function unknown function 1 12880 13044
YP_002003775.1 NC_011042_p40 hypothetical protein phrog_457 tail protein tail 1 22985 25342
YP_002003786.1 NC_011042_p51 unknown product singleton unknown function unknown function 1 36483 36644
YP_002003740.1 NC_011042_p5 gp0.38 phrog_7066 unknown function unknown function 1 1846 2244
YP_002003738.1 NC_011042_p3 unknown product phrog_36394 unknown function unknown function 1 1493 1636
YP_002003768.1 NC_011042_p33 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17628 17996
YP_002003787.1 NC_011042_p52 hypothetical protein phrog_38 terminase large subunit head and packaging 1 36641 38404
YP_002003756.1 NC_011042_p21 gp3.5 phrog_822 amidase lysis 1 10413 10871
YP_002003746.1 NC_011042_p11 unknown product phrog_6515 dGTPase inhibitor other 1 6310 6561
YP_002003785.1 NC_011042_p50 gp18.7 phrog_4306 Rz-like spanin lysis 1 36140 36415
YP_002003754.1 NC_011042_p19 hypothetical protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9480 9935
YP_002003752.1 NC_011042_p17 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8565 8723
YP_002003749.1 NC_011042_p14 gp1.7 phrog_2585 nucleotide kinase other 1 8026 8370
YP_002003777.1 NC_011042_p42 gp13.5 phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 25877 26278
YP_002003776.1 NC_011042_p41 hypothetical protein phrog_308 internal virion protein head and packaging 1 25419 25874
YP_002003769.1 NC_011042_p34 gp7.3 phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17989 18237
YP_002003781.1 NC_011042_p46 hypothetical protein phrog_14442 tail protein tail 1 33109 35412
YP_002003760.1 NC_011042_p25 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13108 15279
YP_002003750.1 NC_011042_p15 gp1.8 phrog_1312 unknown function unknown function 1 8333 8452
YP_002003758.1 NC_011042_p23 hypothetical protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11180 12868
YP_002003757.1 NC_011042_p22 gp3.7 singleton unknown function unknown function 1 10895 10990
YP_002003743.1 NC_011042_p8 gp1.1 phrog_8082 unknown function unknown function 1 5274 5489
YP_002003773.1 NC_011042_p38 hypothetical protein phrog_446 tail protein tail 1 22182 22748
YP_002003765.1 NC_011042_p30 unknown product phrog_28149 unknown function unknown function 1 16847 16939
YP_002003739.1 NC_011042_p4 gp0.6 phrog_2385 unknown function unknown function 1 1649 1846
YP_002003753.1 NC_011042_p18 gp2.5 phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8782 9480
YP_002003780.1 NC_011042_p45 hypothetical protein phrog_342 internal virion protein with endolysin domain head and packaging 1 29157 33044
YP_002003771.1 NC_011042_p36 hypothetical protein phrog_1052 head assembly head and packaging 1 19933 20817
YP_002003770.1 NC_011042_p35 hypothetical protein phrog_449 head-tail adaptor connector 1 18249 19817
YP_002003761.1 NC_011042_p26 gp5.5 phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 15279 15578
YP_002003755.1 NC_011042_p20 gp3.2 phrog_16385 unknown function unknown function 1 9932 10423
YP_002003764.1 NC_011042_p29 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15999 16865
YP_002003762.1 NC_011042_p27 gp5.7 phrog_1334 unknown function unknown function 1 15575 15784
YP_002003778.1 NC_011042_p43 hypothetical protein phrog_805 internal virion protein head and packaging 1 26271 26858
YP_002003744.1 NC_011042_p9 gp1.05 phrog_8103 unknown function unknown function 1 5568 6038
YP_002003766.1 NC_011042_p31 unknown product phrog_1447 unknown function unknown function 1 17076 17348
YP_002003779.1 NC_011042_p44 hypothetical protein phrog_1339 internal virion protein head and packaging 1 26870 29152
YP_002003763.1 NC_011042_p28 unknown product phrog_2251 unknown function unknown function 1 15781 15999
YP_002003783.1 NC_011042_p48 hypothetical protein phrog_1351 terminase small subunit head and packaging 1 35666 35929
YP_002003748.1 NC_011042_p13 gp1.6 phrog_1777 unknown function unknown function 1 7772 8026
YP_002003788.1 NC_011042_p53 gp19.5 phrog_2193 unknown function unknown function 1 38702 38860
YP_002003772.1 NC_011042_p37 gp10A phrog_267 major head protein head and packaging 1 20944 21987
YP_002003745.1 NC_011042_p10 gp1.1 phrog_4383 unknown function unknown function 1 6127 6306
YP_002003747.1 NC_011042_p12 gp1.3 phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6561 7658
YP_002003742.1 NC_011042_p7 unknown product phrog_28104 unknown function unknown function 1 5033 5263
YP_002003737.1 NC_011042_p2 gp0.35 phrog_5058 unknown function unknown function 1 1322 1474
YP_002003782.1 NC_011042_p47 gp17.5 phrog_920 holin lysis 1 35475 35669
YP_002003774.1 NC_011042_p39 unknown product phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 22748 22975
YP_002003736.1 NC_011042_p1 gp0.3 phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 990 1322
YP_002003784.1 NC_011042_p49 gp18.5 phrog_1327 Rz-like spanin lysis 1 36040 36486
YP_002003741.1 NC_011042_p6 hypothetical protein phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2336 5017
YP_002003767.1 NC_011042_p32 gp6.7 phrog_1391 unknown function unknown function 1 17363 17587