| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_011045 |
Definition |
Enterobacteria phage 13a, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teseptimavirus. |
DB of origin |
REFSEQ |
Length |
38841 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
48.38 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_002003950.1 | NC_011045_p17 | gp3.5 | phrog_822 | amidase | lysis | 1 | 8897 | 9352 |
| YP_002003955.1 | NC_011045_p22 | gp4.3 | phrog_1950 | unknown function | unknown function | 1 | 11613 | 11825 |
| YP_002003977.1 | NC_011045_p44 | hypothetical protein | phrog_1339 | internal virion protein | head and packaging | 1 | 26789 | 29032 |
| YP_002003942.1 | NC_011045_p9 | gp1.5 | phrog_12128 | unknown function | unknown function | 1 | 6364 | 6456 |
| YP_002003979.1 | NC_011045_p46 | hypothetical protein | phrog_4242 | tail fiber protein | tail | 1 | 33088 | 34764 |
| YP_002003936.1 | NC_011045_p3 | gp0.4 | phrog_5058 | unknown function | unknown function | 1 | 1566 | 1703 |
| YP_002003971.1 | NC_011045_p38 | hypothetical protein | phrog_1052 | head assembly | head and packaging | 1 | 20415 | 21338 |
| YP_002003948.1 | NC_011045_p15 | gp2.5 | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7743 | 8441 |
| YP_002003974.1 | NC_011045_p41 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 23306 | 25690 |
| YP_002003935.1 | NC_011045_p2 | gp0.3 | phrog_2568 | ocr-like anti-restriction | moron, auxiliary metabolic gene and host takeover | 1 | 1213 | 1563 |
| YP_002003969.1 | NC_011045_p36 | gp7.7 | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 18310 | 18705 |
| YP_002003957.1 | NC_011045_p24 | gp4.7 | phrog_4023 | unknown function | unknown function | 1 | 12190 | 12597 |
| YP_002003953.1 | NC_011045_p20 | gp4B | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10056 | 11567 |
| YP_002003934.1 | NC_011045_p1 | gp0.45 | phrog_6500 | unknown function | unknown function | 1 | 903 | 1142 |
| YP_002003949.1 | NC_011045_p16 | hypothetical protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8442 | 8897 |
| YP_002003958.1 | NC_011045_p25 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12616 | 15331 |
| YP_002003937.1 | NC_011045_p4 | gp0.7 | singleton | unknown function | unknown function | 1 | 1768 | 1902 |
| YP_002003940.1 | NC_011045_p7 | gp1.2 | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 4938 | 5195 |
| YP_002003987.1 | NC_011045_p54 | gp19.4 | phrog_6254 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37645 | 38106 |
| YP_002003943.1 | NC_011045_p10 | gp1.6 | phrog_1777 | unknown function | unknown function | 1 | 6482 | 6742 |
| YP_002003946.1 | NC_011045_p13 | gp1.8 | phrog_1312 | unknown function | unknown function | 1 | 7362 | 7481 |
| YP_002003980.1 | NC_011045_p47 | gp17.5 | phrog_920 | holin | lysis | 1 | 34823 | 35026 |
| YP_002003968.1 | NC_011045_p35 | gp7.3 | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18035 | 18313 |
| YP_002003970.1 | NC_011045_p37 | hypothetical protein | phrog_449 | head-tail adaptor | connector | 1 | 18705 | 20315 |
| YP_002003973.1 | NC_011045_p40 | hypothetical protein | phrog_446 | tail protein | tail | 1 | 22694 | 23284 |
| YP_002003965.1 | NC_011045_p32 | gp6.5 | phrog_1447 | unknown function | unknown function | 1 | 17105 | 17359 |
| YP_002003961.1 | NC_011045_p28 | gp5.7 | phrog_1334 | unknown function | unknown function | 1 | 15650 | 15859 |
| YP_002003939.1 | NC_011045_p6 | gp1.1 | phrog_2490 | unknown function | unknown function | 1 | 4808 | 4936 |
| YP_002003944.1 | NC_011045_p11 | gp1.7 | phrog_2585 | nucleotide kinase | other | 1 | 6742 | 7281 |
| YP_002003960.1 | NC_011045_p27 | gp5.5 | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 15351 | 15650 |
| YP_002003945.1 | NC_011045_p12 | unknown product | phrog_29660 | unknown function | unknown function | 1 | 7271 | 7378 |
| YP_002003951.1 | NC_011045_p18 | gp3.8 | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9413 | 9895 |
| YP_002003982.1 | NC_011045_p49 | gp18.5 | phrog_1327 | Rz-like spanin | lysis | 1 | 35395 | 35838 |
| YP_002003959.1 | NC_011045_p26 | endonuclease | phrog_6254 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14660 | 15055 |
| YP_002003981.1 | NC_011045_p48 | hypothetical protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35031 | 35300 |
| YP_002003963.1 | NC_011045_p30 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16004 | 16906 |
| YP_002003983.1 | NC_011045_p50 | gp18.7 | phrog_4306 | Rz-like spanin | lysis | 1 | 35510 | 35761 |
| YP_002003985.1 | NC_011045_p52 | gp19.2 | phrog_8982 | unknown function | unknown function | 1 | 36494 | 36727 |
| YP_002003988.1 | NC_011045_p55 | gp19.5 | phrog_2193 | unknown function | unknown function | 1 | 38283 | 38432 |
| YP_002003966.1 | NC_011045_p33 | gp6.7 | phrog_1391 | unknown function | unknown function | 1 | 17364 | 17630 |
| YP_002003941.1 | NC_011045_p8 | gp1.3 | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 5274 | 6296 |
| YP_002003947.1 | NC_011045_p14 | hypothetical protein | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 7483 | 7677 |
| YP_002003956.1 | NC_011045_p23 | gp4.5 | phrog_2254 | unknown function | unknown function | 1 | 11845 | 12126 |
| YP_002003986.1 | NC_011045_p53 | gp19.3 | phrog_8173 | unknown function | unknown function | 1 | 37031 | 37159 |
| YP_002003975.1 | NC_011045_p42 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 25771 | 26187 |
| YP_002003978.1 | NC_011045_p45 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29059 | 33015 |
| YP_002003967.1 | NC_011045_p34 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 17630 | 18031 |
| YP_002003984.1 | NC_011045_p51 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 35848 | 37608 |
| YP_002003972.1 | NC_011045_p39 | gp10A | phrog_267 | major head protein | head and packaging | 1 | 21437 | 22471 |
| YP_002003962.1 | NC_011045_p29 | gp5.9 | phrog_9014 | Gp5.9-like inihibitor of recBCD nuclease | moron, auxiliary metabolic gene and host takeover | 1 | 15859 | 16017 |
| YP_002003976.1 | NC_011045_p43 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 26192 | 26782 |
| YP_002003952.1 | NC_011045_p19 | gp4A | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 9873 | 11567 |
| YP_002003938.1 | NC_011045_p5 | hypothetical protein | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1973 | 4624 |
| YP_002003954.1 | NC_011045_p21 | gp4.2 | phrog_5140 | unknown function | unknown function | 1 | 11290 | 11601 |
| YP_002003964.1 | NC_011045_p31 | gp6.3 | phrog_11345 | unknown function | unknown function | 1 | 16894 | 17007 |