Genomic map of Lactococcus virus Bibb29 (NC_011046)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_011046
Definition
Lactococcus phage bIBB29, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
DB of origin
REFSEQ
Length
29305
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.72
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_002004015.1 NC_011046_p27 hypothetical protein singleton unknown function unknown function -1 18814 19002
YP_002004028.1 NC_011046_p40 hypothetical protein phrog_1295 unknown function unknown function -1 22702 22917
YP_002004018.1 NC_011046_p30 hypothetical protein phrog_1509 unknown function unknown function -1 19436 19690
YP_002004042.1 NC_011046_p54 hypothetical protein phrog_1652 unknown function unknown function 1 28422 28589
YP_002004011.1 NC_011046_p23 hypothetical protein phrog_5087 unknown function unknown function -1 17434 17691
YP_002003990.1 NC_011046_p2 phage terminase large subunit phrog_9 terminase large subunit head and packaging 1 784 2406
YP_002004001.1 NC_011046_p13 hypothetical protein phrog_1420 virion structural protein head and packaging 1 8409 8684
YP_002003996.1 NC_011046_p8 phage structural protein phrog_1429 virion structural protein head and packaging 1 5804 6118
YP_002004034.1 NC_011046_p46 hypothetical protein phrog_1405 unknown function unknown function -1 24854 25117
YP_002004010.1 NC_011046_p22 lytic transglycosylase phrog_3874 transglycosylase other -1 16808 17392
YP_002003992.1 NC_011046_p4 phage portal protein phrog_12 portal protein head and packaging 1 2693 3829
YP_002004013.1 NC_011046_p25 hypothetical protein phrog_1430 unknown function unknown function -1 17989 18261
YP_002004024.1 NC_011046_p36 hypothetical protein phrog_1825 DNA methyltransferase other -1 21274 21519
YP_002003989.1 NC_011046_p1 phage terminase small subunit phrog_1437 terminase small subunit head and packaging 1 259 783
YP_002004023.1 NC_011046_p35 hypothetical protein phrog_1083 unknown function unknown function -1 20895 21218
YP_002003994.1 NC_011046_p6 phage structural protein phrog_1393 minor head protein head and packaging 1 4339 5520
YP_002004008.1 NC_011046_p20 holin phrog_1379 unknown function unknown function 1 15649 16002
YP_002004004.1 NC_011046_p16 fiber protein phrog_1424 tail protein tail 1 11966 13426
YP_002004005.1 NC_011046_p17 hypothetical protein phrog_1432 tail associated lysin tail 1 13426 14553
YP_002004036.1 NC_011046_p48 hypothetical protein phrog_7549 unknown function unknown function -1 26105 26350
YP_002004033.1 NC_011046_p45 hypothetical protein phrog_2228 unknown function unknown function -1 24423 24803
YP_002004006.1 NC_011046_p18 hypothetical protein phrog_1434 unknown function unknown function 1 14543 14836
YP_002004002.1 NC_011046_p14 hypothetical protein phrog_1421 virion structural protein head and packaging 1 8704 9216
YP_002004019.1 NC_011046_p31 hypothetical protein phrog_3365 unknown function unknown function -1 19754 19942
YP_002004021.1 NC_011046_p33 hypothetical protein phrog_1225 unknown function unknown function -1 20460 20765
YP_002004025.1 NC_011046_p37 hypothetical protein phrog_10825 unknown function unknown function -1 21519 21764
YP_002004007.1 NC_011046_p19 receptor binding protein phrog_6465 tail protein tail 1 14826 15635
YP_002003993.1 NC_011046_p5 capsid maturation peptidase phrog_80 head maturation protease head and packaging 1 3810 4346
YP_002003997.1 NC_011046_p9 phage structural protein phrog_1484 virion structural protein head and packaging 1 6115 6456
YP_002004029.1 NC_011046_p41 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22930 23289
YP_002004020.1 NC_011046_p32 hypothetical protein phrog_3530 unknown function unknown function -1 20021 20458
YP_002004032.1 NC_011046_p44 hypothetical protein phrog_1632 unknown function unknown function -1 24136 24426
YP_002003995.1 NC_011046_p7 phage structural protein phrog_1428 head-tail connector protein connector 1 5541 5804
YP_002004003.1 NC_011046_p15 tail tape measure protein phrog_58 tail length tape measure protein tail 1 9216 11966
YP_002004035.1 NC_011046_p47 DNA polymerase phrog_1284 unknown function unknown function -1 25110 26060
YP_002004030.1 NC_011046_p42 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23294 23929
YP_002004022.1 NC_011046_p34 hypothetical protein phrog_1508 unknown function unknown function -1 20765 20884
YP_002003999.1 NC_011046_p11 major structural protein phrog_1433 major tail protein tail 1 6825 7730
YP_002004039.1 NC_011046_p51 hypothetical protein phrog_1952 unknown function unknown function 1 27682 27810
YP_002004040.1 NC_011046_p52 hypothetical protein phrog_1436 unknown function unknown function 1 27815 27946
YP_002004017.1 NC_011046_p29 hypothetical protein phrog_1820 unknown function unknown function -1 19255 19443
YP_002004009.1 NC_011046_p21 N-acetylmyramoyl amidase phrog_670 endolysin lysis 1 15999 16700
YP_002004026.1 NC_011046_p38 hypothetical protein phrog_1919 unknown function unknown function -1 21801 22115
YP_002004041.1 NC_011046_p53 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27943 28425
YP_002004031.1 NC_011046_p43 hypothetical protein phrog_1449 unknown function unknown function -1 23916 24323
YP_002004016.1 NC_011046_p28 hypothetical protein phrog_1441 unknown function unknown function -1 19058 19255
YP_002003991.1 NC_011046_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2396 2680
YP_002004027.1 NC_011046_p39 hypothetical protein phrog_1317 unknown function unknown function -1 22196 22705
YP_002004012.1 NC_011046_p24 hypothetical protein phrog_5152 unknown function unknown function -1 17720 17968
YP_002003998.1 NC_011046_p10 phage structural protein phrog_1440 virion structural protein head and packaging 1 6447 6812
YP_002004014.1 NC_011046_p26 hypothetical protein singleton unknown function unknown function -1 18255 18359
YP_002004038.1 NC_011046_p50 hypothetical protein phrog_1656 unknown function unknown function -1 27363 27551
YP_002004000.1 NC_011046_p12 phage tail structural protein singleton unknown function unknown function 1 7933 8388
YP_002004037.1 NC_011046_p49 hypothetical protein phrog_2413 unknown function unknown function -1 26866 26994